SNP Profiles matching PA 165 [PER]

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
GGAAACGGCCACGGCCAAGGAAACCCGG
1._RUQ_1576
____ACGGCCCCGGCCAA__AAAACCGG
2._RUQ_1642
____ACGGCCCCGGCCAA__AAAACCGG
3._RUQ_1642
____ACGGCCCCGGCCAA__AAAACCGG
4._RUQ_1569
____ACGGCCAAAGCCAA__AAACCTGT
5._RUQ_1564
____ACGGCCAAAGCCAA__AAACCTGT
 1516171819202122232425262728
_Input profile
CGCCTTAATTGGCCCCCCCGAACCAGCC
1._RUQ_1576
CGCCTT____GGCCCC________AGCC
2._RUQ_1642
CGCCTT____GGCCCC________AGCC
3._RUQ_1642
CGCCTT____GGCCCC________AGCC
4._RUQ_1569
CGCCTT____GGCCCC________AGCC
5._RUQ_1564
CGCCTT____GGCCCC________AGCC
 293031323334353637383940  
_Input profile
AGAACCCCTTTTACTTCCCGAGCTX_XX_X
1._RUQ_1576
________TT______CCCGGG__X_XX_X
2._RUQ_1642
________TT______CCCGGG__X_XX_X
3._RUQ_1642
________TT______CCCGGG__X_XX_X
4._RUQ_1569
________TT______CCCGAG__X_XX_X
5._RUQ_1564
________TT______CCCGAG__X_XX_X

Input profile: PA_165_[PER]

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 714
 Dapeng Zhang, 2014

1._PA_124_[PER] RUQ_1576

93.5 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._PA_195_[PER] RUQ_1642

93.5 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

3._PA_195_[PER] RUQ_1642

93.5 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

4._CRUZ_7_/14 RUQ_1569

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

5._PA_71_[PER] RUQ_1564

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

 


  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP193 7TcSNP230 8TcSNP242 9TcSNP372 10TcSNP429
11TcSNP469 12TcSNP529 13TcSNP534 14TcSNP560 15TcSNP577
16TcSNP591 17TcSNP619 18TcSNP645 19TcSNP836 20TcSNP872
21TcSNP878 22TcSNP891 23TcSNP917 24TcSNP929 25TcSNP953
26TcSNP994 27TcSNP998 28TcSNP1060 29TcSNP1062 30TcSNP1075
31TcSNP1144 32TcSNP1165 33TcSNP1253 34TcSNP1270 35TcSNP1350
36TcSNP1414 37TcSNP1442 38TcSNP1458 39TcSNP1484 40TcSNP1520