SNP Profiles matching MARPER 18

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 Key

 1234567891011121314
_Input profile
CGATCCGTCTACAACCATAGAGACCTGT
1._JA_4_/7_[POU]
CGATCCGTCTACAACCATAGAGACCTGT
2._JA_4_/7_[POU]
CGATCCGTCTACAACCATAGAGACCTGT
3._JA_4_/7_[POU]
CGATCCGTCTACAACCATAGAGACCTGT
4._JA_4_/7_[POU]
CGATCCGTCTACAACCATAGAGACCTGT
5._JA_4_/7_[POU]
CGATCCGTCTACAACCATAGAGACCTGT
6._GC-08-284-8-56
CGATCCGTCTACAACCATAGAGACCTGT
7._GC-08-284-8-56
CGATCCGTCTACAACCATAGAGACCTGT
8._RUQ_383
CGATCCGTCTCCAACCATGGAGACCTGT
9._EET_58_[ECU]
CGATCCGTCTCCAACCATAGAGACCTGT
10._RUQ_352
____CCGTCTACAACCAT__AGACCTGT
11._UF_29
CGATCCGTCTACAACCATAG__ACCT__
12._COCA_3310_/3_[CHA]
CGATCCGTCTACAACCATAGAGACCTGT
13._COCA_3310_/3_[CHA]
CGATCCGTCTACAACCATAGAGACCTGT
14._EET_94_[ECU]
CGATCCGTCTACAACCATAGAGACCTGT
15._EET_94_[ECU]
CGATCCGTCTACAACCATAGAGACCTGT
16._EET_94_[ECU]
CGATCCGTCTACAACCATAGAGACCTGT
17._EET_94_[ECU]
CGATCCGTCTACAACCATAGAGACCTGT
18._EET_94_[ECU]
CGATCCGTCTACAACCATAGAGACCTGT
19._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
20._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
21._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
22._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
23._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
24._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
25._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
26._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
27._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
28._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
29._C_SUL_7
CGATCCGTCTCCAACCATGGAGACCTGT
30._EET_94_[ECU]
CGATCCGTCTACAACCATAGAGACCTGT
31._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
32._COCA_3310_/3_[CHA]
CGATCCGTCTACAACCATAGAGACCTGT
33._UF_29
CGATCCGTCTACAACCATAGAGACCTGT
34._UF_29
CGATCCGTCTACAACCAT__AGACCTGT
35._UF_29
CGATCCGTCTACAACCAT__AGACCTGT
36._UF_29
CGATCCGTCTACAACCATAAAGACCTGT
37._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
38._MARPER_20
__AT__GT____AACC__GGAGACCT__
39._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
40._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
41._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
42._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
43._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
44._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
45._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
46._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
47._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
48._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
49._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
50._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
51._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
52._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
53._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
54._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
55._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
56._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
57._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
58._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
59._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
60._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
61._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
62._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
63._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
64._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
65._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
66._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
67._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
68._JA_6_/2_[POU]
CGATCCGTCTCCAACCATGGAGACCTGT
69._RUQ_414
CGATCCGTCTACAACCATGGAGACCTGT
70._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
71._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGAC__GT
72._EET_95_[ECU]
CGATCCGTCTAC__CCATGGAGACCTGT
73._EET_95_[ECU]
CGATCCGTCTACAACCATGG__ACCTGT
74._EET_95_[ECU]
CGATCCGTCTACAACCATGGAGACCTGT
75._RUQ_456
____CCGTCTACAACCAT__AAACCTGT
76._RUQ_838
____CCGTCTACAACCAT__AAACCTGT
77._GC-05-079-2-30
CGATCCGTCTACAACCATAGAGACCTGT
78._GC-05-079-2-30
CGATCCGTCTACAACCATAGAGACCTGT
79._GC-08-147-3-46
CGATCCGTCTACAACCATAGAGACCTGT
80._GC-08-147-3-46
CGATCCGTCTACAACCATAGAGACCTGT
81._GC-08-147-3-46
CGATCCGTCTACAACCATAGAGACCTGT
82._GC-08-147-3-46
CGATCCGTCTACAACCATAGAGACCTGT
83._GC-08-147-3-46
CGATCCGTCTACAACCATAGAGACCTGT
84._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
85._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
86._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
87._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
88._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
89._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
90._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
91._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
92._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
93._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
94._GC-01-020-1-20
CGATCCGTCTACAACCATAGAGACCTGT
95._GC-01-020-1-20
CGATCCGTCTACAACCAT__AGACCTGT
96._GC-01-020-1-20
CGATCCGTCTACAACCAT__AGACCTGT
97._GC-03-006-1-06
CGATCCGTCTACAACCATGGAGACCTGT
98._EET_19_[ECU]
CGATCCGTCTCCAGCCATAGGGACCTGG
 1516171819202122232425262728
_Input profile
CGCCCTAGGGCTGGGGCTCTGGATTTAA
1._JA_4_/7_[POU]
CGCCCTAGGG__GG__CTCTGGATTTAA
2._JA_4_/7_[POU]
CGCCCTAGGG__GG__CTCTGGATTTAA
3._JA_4_/7_[POU]
CGCCCTAGGG__GG__CTCTGGATTTAA
4._JA_4_/7_[POU]
CGCCCTAGGG__GG__CTCTGGATTTAA
5._JA_4_/7_[POU]
CGCCCTAGGG__GG__CTCTGGATTTAA
6._GC-08-284-8-56
CGCCCTAGGGCGGGGGCTCTGGATTTAA
7._GC-08-284-8-56
CGCCCTAGGGCGGGGGCTCTGGATTTAA
8._RUQ_383
CGCCCTAGGG__GG__CTCTGGATTTAG
9._EET_58_[ECU]
CGCCTTAGGG__GG__CTCTGGATTTAG
10._RUQ_352
GGCCCT__GG__GGGGTT________AA
11._UF_29
CGACCTAAGG__GG__CTCTGG__TT__
12._COCA_3310_/3_[CHA]
CGACCTAGGG__GG__CTCTGGATTTAG
13._COCA_3310_/3_[CHA]
CGACCTAGGG__GG__CTCTGGATTTAG
14._EET_94_[ECU]
CGCCTTAGGG__GG__CTCTGGATTTAG
15._EET_94_[ECU]
CGCCTTAGGG__GG__CTCTGGATTTAG
16._EET_94_[ECU]
CGCCTTAGGG__GG__CTCTGGATTTAG
17._EET_94_[ECU]
CGCCTTAGGG__GG__CTCTGGATTTAG
18._EET_94_[ECU]
CGCCTTAGGG__GG__CTCTGGATTTAG
19._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
20._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
21._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
22._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
23._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
24._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
25._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
26._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
27._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
28._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
29._C_SUL_7
CGCCTTAGGG__GG__CTCTGGATTTAG
30._EET_94_[ECU]
CGCCTTAAGG__GG__CTCTGGATTTAG
31._UF_29
CGACCTAAGG__GG__CTCTGGATTTAG
32._COCA_3310_/3_[CHA]
CGACCTAAGG__GG__CTCTGGATTTAG
33._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
34._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
35._UF_29
CGACCTAGGG__GG__CTCTGGATTTAG
36._UF_29
CGACCTAAGG__GG__CTCTGGATTTAG
37._EET_95_[ECU]
CGCCTTAGGT______CTTTGGATTTAG
38._MARPER_20
CG__TTAGGGCT____CT__GGATTTAG
39._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
40._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
41._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
42._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
43._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
44._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
45._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
46._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
47._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
48._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
49._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
50._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
51._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
52._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
53._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
54._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
55._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
56._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
57._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
58._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
59._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
60._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
61._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
62._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
63._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
64._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
65._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
66._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
67._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
68._JA_6_/2_[POU]
CGCCTTAAGG__GG__CTCTGGATTTAG
69._RUQ_414
CGCCTTAAGT__GG__CTTTGGATTTAG
70._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
71._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
72._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
73._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
74._EET_95_[ECU]
CGCCTTAGGT__GG__CTTTGGATTTAG
75._RUQ_456
GGCCTT__GG__GGCGCT________AA
76._RUQ_838
GGCCTT__GG__GGCGCT________AA
77._GC-05-079-2-30
CGACCTAGGGCGGGCGCTCTGGATTTAG
78._GC-05-079-2-30
CGACCTAGGGCGGGCGCTCTGGATTTAG
79._GC-08-147-3-46
CGCCTTAGGGCGGGCGCTCTGGATTTAG
80._GC-08-147-3-46
CGCCTTAGGGCGGGCGCTCTGGATTTAG
81._GC-08-147-3-46
CGCCTTAGGGCGGGCGCTCTGGATTTAG
82._GC-08-147-3-46
CGCCTTAGGGCGGGCGCTCTGGATTTAG
83._GC-08-147-3-46
CGCCTTAGGGCGGGCGCTCTGGATTTAG
84._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
85._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
86._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
87._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
88._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
89._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
90._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
91._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
92._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
93._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
94._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
95._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
96._GC-01-020-1-20
CGACCTAGGGCGGGCGCTCTGGATTTAG
97._GC-03-006-1-06
CGCCTTAGGTCG__GGCTTTGGATTTAG
98._EET_19_[ECU]
CGCC__AGGG__GG__CTCTGGATTTAG
 2930313233343536373839   
_Input profile
CCAGCTCTGTCTACCTCTCGCTX_XX_XX_X
1._JA_4_/7_[POU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
2._JA_4_/7_[POU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
3._JA_4_/7_[POU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
4._JA_4_/7_[POU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
5._JA_4_/7_[POU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
6._GC-08-284-8-56
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
7._GC-08-284-8-56
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
8._RUQ_383
CCAGCTCTGTCTACCTCTCGCTX_XX_XX_X
9._EET_58_[ECU]
CCAGCTCTGTCTACCTCTCGCTX_XX_XX_X
10._RUQ_352
CC______GT______CTCG__X_XX_XX_X
11._UF_29
__AG__CCGTCTACCTCTCG__X_XX_XX_X
12._COCA_3310_/3_[CHA]
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
13._COCA_3310_/3_[CHA]
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
14._EET_94_[ECU]
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
15._EET_94_[ECU]
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
16._EET_94_[ECU]
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
17._EET_94_[ECU]
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
18._EET_94_[ECU]
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
19._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
20._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
21._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
22._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
23._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
24._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
25._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
26._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
27._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
28._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
29._C_SUL_7
CCAGCTCTGTCTACCTCTCGCTX_XX_XX_X
30._EET_94_[ECU]
CCAGCTCCGTCTACCTCTCGCTX_XX_XX_X
31._UF_29
CCAGCTCCGTCTACCTCTCGCTX_XX_XX_X
32._COCA_3310_/3_[CHA]
CCAGCTCCGTCTACCTCTCGCTX_XX_XX_X
33._UF_29
CCAGCTCCGT__AACTCTCGCTX_XX_XX_X
34._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
35._UF_29
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
36._UF_29
CCAGCTCCGTCTACCTCTCGCTX_XX_XX_X
37._EET_95_[ECU]
CCAGCTCTGTCT__CTCTCGCTX_XX_XX_X
38._MARPER_20
__AG__CT__CTAA__CTCGCTX_XX_XX_X
39._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
40._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
41._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
42._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
43._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
44._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
45._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
46._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
47._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
48._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
49._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
50._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
51._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
52._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
53._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
54._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
55._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
56._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
57._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
58._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
59._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
60._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
61._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
62._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
63._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
64._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
65._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
66._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
67._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
68._JA_6_/2_[POU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
69._RUQ_414
CCAGCTCTGTCTACCTCTCGCTX_XX_XX_X
70._EET_95_[ECU]
CCAGCTCT__CTAACTCTCGCTX_XX_XX_X
71._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
72._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
73._EET_95_[ECU]
CCAGCTCTGTCTAACTCTCGCTX_XX_XX_X
74._EET_95_[ECU]
CCAGCTCTGTCTAACTCT__CTX_XX_XX_X
75._RUQ_456
CC______GT______CTCG__X_XX_XX_X
76._RUQ_838
CC______GT______CTCG__X_XX_XX_X
77._GC-05-079-2-30
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
78._GC-05-079-2-30
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
79._GC-08-147-3-46
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
80._GC-08-147-3-46
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
81._GC-08-147-3-46
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
82._GC-08-147-3-46
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
83._GC-08-147-3-46
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
84._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
85._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
86._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
87._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
88._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
89._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
90._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
91._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
92._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
93._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
94._GC-01-020-1-20
CCAGCTCCGT__AACTCTCGCTX_XX_XX_X
95._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
96._GC-01-020-1-20
CCAGCTCCGTCTAACTCTCGCTX_XX_XX_X
97._GC-03-006-1-06
CCAGCTCTGTCT__CTCTCGCTX_XX_XX_X
98._EET_19_[ECU]
CCAGCTCTGTCTAACTCTCGCCX_XX_XX_X

Input profile: MARPER_18

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 11
 Dapeng Zhang, 2014

1._JA_4_/7_[POU]

98.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8856 7
 Dapeng Zhang, 2016

2._JA_4_/7_[POU]

98.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8856 6
 Dapeng Zhang, 2016

3._JA_4_/7_[POU]

98.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8856 5
 Dapeng Zhang, 2016

4._JA_4_/7_[POU]

98.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8856 3
 Dapeng Zhang, 2016

5._JA_4_/7_[POU]

98.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8856 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

6._JA_4_/7_[POU] GC-08-284-8-56

96.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

7._JA_4_/7_[POU] GC-08-284-8-56

96.2 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

8._EET_58_[ECU] RUQ_383

95.9 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

9._EET_58_[ECU]

95.9 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F465 T10
 Dapeng Zhang, 2016

10._JA_1_/19_[POU] RUQ_352

95.7 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

11._UF_29

95 %
30 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

12._COCA_3310_/3_[CHA]

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5230 2 > FP
 Dapeng Zhang, 2016

13._COCA_3310_/3_[CHA]

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5230 1 > FP
 Dapeng Zhang, 2016

14._EET_94_[ECU]

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8346 9
 Dapeng Zhang, 2016

15._EET_94_[ECU]

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8346 8
 Dapeng Zhang, 2016

16._EET_94_[ECU]

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8346 7
 Dapeng Zhang, 2016

17._EET_94_[ECU]

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8346 6
 Dapeng Zhang, 2016

18._EET_94_[ECU]

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8346 3
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

19._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 3
 Dapeng Zhang, 2016

20._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 7
 Dapeng Zhang, 2016

21._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 8
 Dapeng Zhang, 2016

22._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 10
 Dapeng Zhang, 2016

23._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 13
 Dapeng Zhang, 2016

24._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 15
 Dapeng Zhang, 2016

25._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 16
 Dapeng Zhang, 2016

26._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 14 > F
 Dapeng Zhang, 2016

27._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 4 > FP
 Dapeng Zhang, 2016

28._UF_29

94.6 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 6 > FP
 Dapeng Zhang, 2016

29._C_SUL_7

94.6 %
37 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

30._EET_94_[ECU]

94.6 %
37 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

31._UF_29

94.6 %
37 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

32._COCA_3310_/3_[CHA]

94.6 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B E371 T2
 Dapeng Zhang, 2016

33._UF_29

94.4 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

34._UF_29

94.4 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 12
 Dapeng Zhang, 2016

35._UF_29

94.4 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1115 9 > FP
 Dapeng Zhang, 2016

36._UF_29

93.2 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F454 T8
 Dapeng Zhang, 2016

37._EET_95_[ECU]

92.9 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 5
 Dapeng Zhang, 2016

38._MARPER_20

92 %
25 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER D 47
 Dapeng Zhang, 2014

39._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 10
 Dapeng Zhang, 2016

40._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 9
 Dapeng Zhang, 2016

41._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 7
 Dapeng Zhang, 2016

42._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 6
 Dapeng Zhang, 2016

43._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 5
 Dapeng Zhang, 2016

44._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 4
 Dapeng Zhang, 2016

45._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 3
 Dapeng Zhang, 2016

46._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 2
 Dapeng Zhang, 2016

47._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 1
 Dapeng Zhang, 2016

48._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 17
 Dapeng Zhang, 2016

49._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 14
 Dapeng Zhang, 2016

50._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 13
 Dapeng Zhang, 2016

51._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 11
 Dapeng Zhang, 2016

52._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 10
 Dapeng Zhang, 2016

53._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 9
 Dapeng Zhang, 2016

54._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 8
 Dapeng Zhang, 2016

55._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 7
 Dapeng Zhang, 2016

56._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 6
 Dapeng Zhang, 2016

57._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 12 > F
 Dapeng Zhang, 2016

58._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 11 > F
 Dapeng Zhang, 2016

59._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 1 > FP
 Dapeng Zhang, 2016

60._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 16
 Dapeng Zhang, 2016

61._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 15
 Dapeng Zhang, 2016

62._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 14
 Dapeng Zhang, 2016

63._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 9
 Dapeng Zhang, 2016

64._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 8
 Dapeng Zhang, 2016

65._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 7
 Dapeng Zhang, 2016

66._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 6
 Dapeng Zhang, 2016

67._EET_95_[ECU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3106 3
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

68._JA_6_/2_[POU]

91.9 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 12
 Dapeng Zhang, 2016

69._EET_95_[ECU] RUQ_414

91.9 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

70._EET_95_[ECU]

91.7 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8819 8
 Dapeng Zhang, 2016

71._EET_95_[ECU]

91.7 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 16
 Dapeng Zhang, 2016

72._EET_95_[ECU]

91.7 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 15
 Dapeng Zhang, 2016

73._EET_95_[ECU]

91.7 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 12
 Dapeng Zhang, 2016

74._EET_95_[ECU]

91.7 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 2
 Dapeng Zhang, 2016

75._JA_10_/12_[POU] RUQ_456

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

76._JA_5_/25_[POU] RUQ_838

91.3 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

77._COCA_3310_[CHA] GC-05-079-2-30

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: PL1
Notes: PL1 FP1
 Mars, 2018

78._COCA_3310_[CHA] GC-05-079-2-30

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Notes: PL2 FP2
 Mars, 2018

79._EET_94_[ECU] GC-08-147-3-46

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

80._EET_94_[ECU] GC-08-147-3-46

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

81._EET_94_[ECU] GC-08-147-3-46

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

82._EET_94_[ECU] GC-08-147-3-46

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

83._EET_94_[ECU] GC-08-147-3-46

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

84._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

85._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

86._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6 > FP4
 Mars, 2018

87._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

88._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

89._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

90._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

91._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP3
 Mars, 2018

92._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

93._UF_29 GC-01-020-1-20

91 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

94._UF_29 GC-01-020-1-20

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

95._UF_29 GC-01-020-1-20

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

96._UF_29 GC-01-020-1-20

90.8 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

97._EET_95_[ECU] GC-03-006-1-06

90.5 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

98._EET_19_[ECU]

90.3 %
36 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5437 2 > FP
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP193 7TcSNP230 8TcSNP242 9TcSNP372 10TcSNP429
11TcSNP469 12TcSNP529 13TcSNP534 14TcSNP560 15TcSNP577
16TcSNP591 17TcSNP619 18TcSNP645 19TcSNP723 20TcSNP836
21TcSNP872 22TcSNP878 23TcSNP891 24TcSNP917 25TcSNP929
26TcSNP953 27TcSNP994 28TcSNP998 29TcSNP1060 30TcSNP1062
31TcSNP1144 32TcSNP1165 33TcSNP1253 34TcSNP1270 35TcSNP1350
36TcSNP1414 37TcSNP1442 38TcSNP1458 39TcSNP1520