SNP Profiles matching GU 221H

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCAAGGTTGGCCCGGGCTAGGGAAGG
1._GU_221_/H___
____ACGGTT__CCCGGGTT____AAGG
2._GU_221_/H___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
3._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
4._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
5._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
6._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
7._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
8._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
9._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
10._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
11._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
12._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
13._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
14._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
15._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGGAAGG
16._U_54_[PER]___
TTCCACGGTTGGCCCGGGTTAAGG__GG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCGGGGCCCCTTTTGGAATTACCCGG
1._GU_221_/H___
ACCCGGGGCC__TT__GG______CC__
2._GU_221_/H___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
3._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
4._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
5._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
6._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
7._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
8._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
9._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
10._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
11._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
12._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
13._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
14._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
15._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
16._U_54_[PER]___
ACCCGGGGCCCCTTCTGGAATTCCCCGG
 29 30 31 32 33 34 35 36 37 38 39 40 41  
_Input profile
TTAACCCCGGAATTGTCCCCCCCCAGX_X
1._GU_221_/H___
TTAA__CC______GT____CCCCAGX_X
2._GU_221_/H___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
3._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
4._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
5._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
6._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
7._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
8._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
9._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
10._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
11._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
12._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
13._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
14._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
15._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X
16._U_54_[PER]___
TTAACCCCGGAATTGTTTCCCCCCAGX_X

Input profile: U_45_[PER] RUQ_1495

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._GU_221_/H

93.8 %
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 4 > FP
 Dapeng Zhang, 2016

2._GU_221_/H GC-01-074-4-10

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

3._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

4._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

5._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

6._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

7._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

8._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

9._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

10._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

11._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

12._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

13._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

14._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

15._U_54_[PER] GC-03-026-2-15

90.2 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9 > FP1
 Mars, 2018

16._U_54_[PER] GC-03-026-2-15

90 %
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP469 15TcSNP529
16TcSNP534 17TcSNP560 18TcSNP577 19TcSNP591 20TcSNP602
21TcSNP619 22TcSNP702 23TcSNP723 24TcSNP731 25TcSNP799
26TcSNP823 27TcSNP872 28TcSNP878 29TcSNP891 30TcSNP998
31TcSNP999 32TcSNP1060 33TcSNP1063 34TcSNP1111 35TcSNP1126
36TcSNP1253 37TcSNP1309 38TcSNP1439 39TcSNP1442 40TcSNP1458
41TcSNP1484