SNP Profiles matching PA 56 [PER]

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCCCGGCCGGACCCAGCCGGGGAACC
1._RUQ_32
____CCGGCC__ACCCAGCC____AA__
2._PA_56_[PER]
____CCGGCC__ACCCAGCC____AA__
3._PA_56_[PER]
____CCGGCC__AACCAGCC____AA__
4._PA_56_[PER]
____CCGGCC__AACCAGCC____AA__
5._PA_56_[PER]
____CCGGCC__AACCAGCC____AA__
6._PA_56_[PER]
____CCGGCC__AACCAGCC____AA__
7._PA_56_[PER]
____CCGGCC__AACCAGCC________
8._NA
TTCCCCGGCCGGAACCAGCCGGGGAACC
9._NA
TTCCCCGGCCGGAACCAGCCGGGGAACC
10._NA
TTCCCCGGCCGGAACCAGCCGGGGAACC
11._NA
TTCCCCGGCCGGAACCAGCCGGGGAACC
12._NA
TTCCCCGGCCGGAACCAGCCGGGG__CC
13._RUQ_37
TTCCCCGGCCGGAACCGGCCGGGGAACC
14._GC-03-032-3-11
TTCCCCGGCCGG__CCAGCCGGGGAACC
15._EET_272_[ECU]
____CCGGCC____CCAGCC____AA__
16._GC-03-032-3-11
TTCCCCGGCCGGAACCAGCCGGGGAACC
17._GC-01-034-2-11
TTCCCCGGCCGGAACCAGCCGGGGAACC
18._GC-01-034-2-11
TTCCCCGGCCGGAACCAGCCGGGGAACC
19._GC-01-034-2-11
TTCCCCGGCCGGAACCAGCCGGGGAACC
20._GC-01-034-2-11
TTCCCCGGCCGGAACCAGCCGGGGAACC
21._RUQ_1569
TTCCACGGCCGGAACCAGCCGGGGAACC
22._RUQ_1436
TTCCCCGGCCGGACCCAGCCGGGGAACC
23._RUQ_1564
TTCCACGGCCGGAACCAGCCGGGGAACC
24._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
25._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
26._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
27._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
28._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
29._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
30._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
31._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
32._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
33._GC-08-051-1-62
TTCCACGTCCGGAACCAGCCGGGGAACC
34._EET_272_[ECU]
____CCGGCC__AACCAGCC____AA__
35._PA_150_[PER]
____CCGGCC__AACCAGCC____AA__
36._PA_150_[PER]
____CCGGCC__AACCAGCC____AA__
37._PA_150_[PER]
____CCGGCC__AACCAGCC____AA__
38._PA_150_[PER]
____CCGGCC__AACCAGCC____AA__
39._PA_175_[PER]
____CCGGCC__AACCGGCC____AA__
40._PA_175_[PER]
____CCGGCC__AACCGGCC____AA__
41._PA_175_[PER]
____CCGGCC__AACCGGCC____AA__
42._PA_175_[PER]
____CCGGCC__AACCGGCC____AA__
43._RUQ_37
____CCGGCC__AACCGGCC____AA__
44._PA_175_[PER]
____CCGGCC__AACCGGCC____AA__
45._PA_72_[PER]
____ACGTCC__ACCCAGCC____AA__
46._PA_175_[PER]
____CCGGCC__AACCGGCC____AA__
47._RUQ_1621
TTCCACGGCCGGAACCGGCCGGGGAACC
48._RUQ_1092
TTCCACGGCTGGACCCAGCCGGGGAACC
49._GC-07-077-4-21
TTCCCCGGCCGGCCCCAGCCGGGGAACC
50._EQX_/O_[CHA]
____CCGGCC__CCCCAGCC____AA__
51._PA_128_[PER]
____ACGGCC__AC__AGCC____AA__
52._PA_72_[PER]
____ACGTCC__AC__AGCC____AA__
53._NA
TTCCCCGGCCGGAACCGGCCGGGGAACC
54._NA
TTCCCCGGCCGGAACCGGCCGGGGAACC
55._NA
TTCCCCGGCCGGAACCGGCCGGGGAACC
56._NA
TTCCCCGGCCGGAACCGGCCGGGGAACC
57._RUQ_1668
TTCCCCGGCCGGACCCAGCCGGGGAACC
58._RUQ_1576
TTCCACGGCCGGCCCCGGCCGGGGAACC
59._RUQ_1642
TTCCACGGCCGGCCCCGGCCGGGGAACC
60._RUQ_1642
TTCCACGGCCGGCCCCGGCCGGGGAACC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAACCTGTCGCCTTTTCTGGAGTTAAGG
1._RUQ_32
AAACCTGTCGCC__TT__GG______GG
2._PA_56_[PER]
AAACCTGTCGCC__TT__GG______GG
3._PA_56_[PER]
AAACCTGTCGCC__TT__GG______GG
4._PA_56_[PER]
AAACCTGTCGCC__TT__GG______GG
5._PA_56_[PER]
AAACCTGTCGCC__TT__GG______GG
6._PA_56_[PER]
AAACCTGTCGCC__TT__GG______GG
7._PA_56_[PER]
AAACCTGTCGCC__TT__GG______GG
8._NA
AAACCTGTCGCCTTTTCCGGAGTTAAGG
9._NA
AAACCTGTCGCCTTTTCCGGAGTTAAGG
10._NA
AAACCTGTCGCCTTTTCCGGAGTTAAGG
11._NA
AAACCTGTCGCCTTTTCCGGAGTTAAGG
12._NA
AAACCTGTCGCCTTTTCCGGAGTTAAGG
13._RUQ_37
AAACCTGTCGACTTTTCTGGAGTTAAGG
14._GC-03-032-3-11
AAACCCGTCGCCCTTTCTGGAGTTAAGG
15._EET_272_[ECU]
AAACCCGTCGCC__TT__GG______GG
16._GC-03-032-3-11
AAACCCGTCGCCCTTTCTGGAGTTAAGG
17._GC-01-034-2-11
AAACCCGTCGCCCTTTCTGGAGTTAAGG
18._GC-01-034-2-11
AAACCCGTCGCCCTTTCTGGAGTTAAGG
19._GC-01-034-2-11
AAACCCGTCGCCCTTTCTGGAGTTAAGG
20._GC-01-034-2-11
AAACCCGTCGCCCTTTCTGGAGTTAAGG
21._RUQ_1569
AAACCTGTCGCCTTTTCTGGGGTTAAGG
22._RUQ_1436
AAACCCGTCGCCCTTTTTGGAGTTAAGG
23._RUQ_1564
AAACCTGTCGCCTTTTCTGGGGTTAAGG
24._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
25._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
26._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
27._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
28._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
29._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
30._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
31._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
32._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
33._GC-08-051-1-62
AAACCTGTCGCCTTTTCCGGAGTTAAGG
34._EET_272_[ECU]
AAACCCGTCGCC__TT__GG______GG
35._PA_150_[PER]
AAACCCGTCGCC__TT__GG______GG
36._PA_150_[PER]
AAACCCGTCGCC__TT__GG______GG
37._PA_150_[PER]
AAACCCGTCGCC__TT__GG______GG
38._PA_150_[PER]
AAACCCGTCGCC__TT__GG______GG
39._PA_175_[PER]
AAACCTGTCGAC__TT__GG______GG
40._PA_175_[PER]
AAACCTGTCGAC__TT__GG______GG
41._PA_175_[PER]
AAACCTGTCGAC__TT__GG______GG
42._PA_175_[PER]
AAACCTGTCGAC__TT__GG______GG
43._RUQ_37
AAACCTGTCGAC__TT__GG______GG
44._PA_175_[PER]
AAACCTGTCGAC__TT__________GG
45._PA_72_[PER]
AAACCTGTCGCC__TT__GG______GG
46._PA_175_[PER]
AAACCTGTCGAC__TT__GG______GG
47._RUQ_1621
AAACCTGGCGCCTTTTCTGGAGTTAAGG
48._RUQ_1092
AAACCTGGCGCCCTTTCCGGAATTAAGG
49._GC-07-077-4-21
AAACCCGTCGCCCCTTCTGGAGTTAAGG
50._EQX_/O_[CHA]
AAACCCGTCGCC__TT__GG______GG
51._PA_128_[PER]
AAAACCGTCGCC__TT__________GG
52._PA_72_[PER]
AAACCTGTCGCC__TT__________GG
53._NA
AAACCTGTCGACTTTTCCGGAGTTAAGG
54._NA
AAACCTGTCGACTTTTCCGGAGTTAAGG
55._NA
AAACCTGTCGACTTTTCCGGAGTTAAGG
56._NA
AAACCTGTCGACTTTTCCGGAGTTAAGG
57._RUQ_1668
AGACCTGTCGACCTCTCTGGGGTTACGG
58._RUQ_1576
AAAACCGGCGCCTTTTCTGGAGTTAAGG
59._RUQ_1642
AAAACCGGCGCCTTTTCTGGAGTTAAGG
60._RUQ_1642
AAAACCGGCGCCTTTTCTGGAGTTAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CCCCAGCCCCGGGGTTTTCTCCCTCGGG
1._RUQ_32
__CCAG__CC______TT____CTCGGG
2._PA_56_[PER]
__CCAG__CC______TT____CTCGGG
3._PA_56_[PER]
__CCAG__CC______TT____CTCGGG
4._PA_56_[PER]
__CCAG__CC______TT____CTCGGG
5._PA_56_[PER]
__CCAG__CC______TT____CTCGGG
6._PA_56_[PER]
__CCAG__CC______TT____CTCGGG
7._PA_56_[PER]
__CCAG__CC______TT____CTCGGG
8._NA
CCCCAGCTCCGGGGTTTTTTCCCTCGGG
9._NA
CCCCAGCTCCGGGGTTTTTTCCCTCGGG
10._NA
CCCCAGCTCCGGGGTTTTTTCCCTCGGG
11._NA
CCCCAGCTCCGGGGTTTTTTCCCTCGGG
12._NA
CCCCAGCTCCGGGGTTTTTTCCCTCGGG
13._RUQ_37
CCCCAACCCCGGGGTTTTCTCTCTCGGG
14._GC-03-032-3-11
CCCCAGCCCCGGGGTTTTTTCCCCGGGG
15._EET_272_[ECU]
__CCAG__CC______TT____CCGGGG
16._GC-03-032-3-11
CCCCAGCCCCGGGGTTTTTTCCCCGGGG
17._GC-01-034-2-11
CCCCAGCCCCGGGGTTTTTTCCCCGGGG
18._GC-01-034-2-11
CCCCAGCCCCGGGGTTTTTTCCCCGGGG
19._GC-01-034-2-11
CCCCAGCCCCGGGGTTTTTTCCCCGGGG
20._GC-01-034-2-11
CCCCAGCCCCGGGGTTTTTTCCCCGGGG
21._RUQ_1569
CCCCAGCCCCGGGGTTTTCTCTCCCGAG
22._RUQ_1436
CCCCAGCCCCGGGGTTTTTTCCCCGGGG
23._RUQ_1564
CCCCAGCCCCGGGGTTTTCTCTCCCGAG
24._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
25._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
26._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
27._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
28._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
29._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
30._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
31._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
32._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
33._GC-08-051-1-62
CCCCAGCCCCGGGGTTTT__CCCTGGAG
34._EET_272_[ECU]
__CCAG__CC______TT____CCGGGG
35._PA_150_[PER]
__CCAG__CC______TT____CCGGGG
36._PA_150_[PER]
__CCAG__CC______TT____CCGGGG
37._PA_150_[PER]
__CCAG__CC______TT____CCGGGG
38._PA_150_[PER]
__CCAG__CC______TT____CCGGGG
39._PA_175_[PER]
__CCAA__CC______TT____CTCGGG
40._PA_175_[PER]
__CCAA__CC______TT____CTCGGG
41._PA_175_[PER]
__CCAA__CC______TT____CTCGGG
42._PA_175_[PER]
__CCAA__CC______TT____CTCGGG
43._RUQ_37
__CCAA__CC______TT____CTCGGG
44._PA_175_[PER]
CCCCAA__CC______TT____CTCGGG
45._PA_72_[PER]
__CCAG__CC______TT____CTGGAG
46._PA_175_[PER]
__CCAA__CC______TT____CTCGGG
47._RUQ_1621
CCCCAGCCCCGGGGTTTTCCCTCTCCGG
48._RUQ_1092
CCCCAGCCCCGGGGTTTTCTCCCTGGGG
49._GC-07-077-4-21
CCCC__CCCCGGGGTTTTTTCCCCGGGG
50._EQX_/O_[CHA]
__CC____CC______TT____CCGGGG
51._PA_128_[PER]
CCCCAG__CC______TT____CTGGGG
52._PA_72_[PER]
CCCCAG__CC______TT____CTGGAG
53._NA
CCCCAACTCCGGGGTTTTTTCTCTCGGG
54._NA
CCCCAACTCCGGGGTTTTTTCTCTCGGG
55._NA
CCCCAACTCCGGGGTTTTTTCTCTCGGG
56._NA
CCCCAACTCCGGGGTTTTTTCTCTCGGG
57._RUQ_1668
CCCCAGCCCCGGGGTTTTTTCCCTCGAG
58._RUQ_1576
CCCCAGCCCCGGGGTTTTTTCCCCCGGG
59._RUQ_1642
CCCCAGCCCCGGGGTTTTTTCCCCCGGG
60._RUQ_1642
CCCCAGCCCCGGGGTTTTTTCCCCCGGG

Input profile: PA_56_[PER] RUQ_32

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom