SNP Profiles matching LV 28 [POU]

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 Key

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_Input profile
TTCCCCCTGGACCCAACCGGAGATCCAA
1._EET_95_[ECU]
__CCCT_ACCCAACC__AT__
2._RUQ_354
TTCCCCCTGGACCCAACCGGAGAACCAG
3._RUQ_1539
TTCCCCCTGGACCCAACCAGAGATCCAG
 1516171819202122232425262728
_Input profile
ACCTGTCGCCTTTTCCTTAGTTACGGCG
1._EET_95_[ECU]
ACCTGTCGCC_TT_GT___GG_
2._RUQ_354
CCTTGTCGCCCTTTCCGTAGTTACGGCG
3._RUQ_1539
ACCTGTCGCCCTTTCTGTAGTTACGGCG
 2930313233343536373839404142
_Input profile
TTAAAGTTCCGGAGTTGTTTCTCCCGAA
1._EET_95_[ECU]
CT_AG_CC___GT__CTCGAG
2._RUQ_354
TT-AGTTCCGGAGTTGTTTCTCTCGAG
3._RUQ_1539
TT-AG-CCGGAGTTGTCTCTCTCGAG

Input profile: LV_28_[POU] RUQ_462

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._EET_95_[ECU]

90.9 %
22 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8354 12
 Dapeng Zhang, 2016

2._LV_20_[POU] RUQ_354

90.2 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

3._JA_5_/5_[POU] RUQ_1539

90 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP151 5TcSNP174
6TcSNP193 7TcSNP226 8TcSNP230 9TcSNP242 10TcSNP329
11TcSNP364 12TcSNP372 13TcSNP448 14TcSNP469 15TcSNP529
16TcSNP534 17TcSNP560 18TcSNP577 19TcSNP591 20TcSNP602
21TcSNP619 22TcSNP702 23TcSNP723 24TcSNP731 25TcSNP799
26TcSNP823 27TcSNP872 28TcSNP878 29TcSNP891 30TcSNP899
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484