SNP Profiles matching JA 1 /19 [POU]

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCCCGTCTGGACCCAACCAGGGATCC
1._JA_4_/7_[POU]
____CCGTCT__ACCCAACC____AT__
2._JA_4_/7_[POU]
____CCGTCT__ACCCAACC____AT__
3._JA_4_/7_[POU]
____CCGTCT__ACCCAACC____AT__
4._JA_4_/7_[POU]
____CCGTCT__ACCCAACC____AT__
5._JA_4_/7_[POU]
____CCGTCT__ACCCAACC____AT__
6._MARPER_18
____CCGTCT__AC__AACC____AT__
7._GC-08-284-8-56
TTCCCCGTCTGGACCCAACCAGGGATCC
8._GC-08-284-8-56
TTCCCCGTCTGGACCCAACCAGGGATCC
9._RUQ_414
TTCCCCGTCTGGACCCAACCGGGGATCC
10._COCA_3310_/3_[CHA]
____CCGTCT__ACCCAACC____AT__
11._COCA_3310_/3_[CHA]
____CCGTCT__ACCCAACC____AT__
12._UF_29
____CCGTCT__ACCCAACC____AT__
13._UF_29
____CCGTCT__ACCCAACC____AT__
14._UF_29
____CCGTCT__ACCCAACC____AT__
15._UF_29
____CCGTCT__ACCCAACC____AT__
16._UF_29
____CCGTCT__ACCCAACC____AT__
17._UF_29
____CCGTCT__ACCCAACC____AT__
18._UF_29
____CCGTCT__ACCCAACC____AT__
19._UF_29
____CCGTCT__ACCCAACC____AT__
20._UF_29
____CCGTCT__ACCCAACC____AT__
21._UF_29
____CCGTCT__ACCCAACC____AT__
22._UF_29
____CCGTCT__ACCCAACC____AT__
23._UF_29
____CCGTCT__ACCCAACC____AT__
24._UF_29
____CCGTCT__ACCCAACC____AT__
25._UF_29
____CCGTCT__ACCCAACC____AT__
26._COCA_3310_/3_[CHA]
____CCGTCT__ACCCAACC____AT__
27._UF_29
____CCGTCT__AC__AACC____AT__
28._RUQ_1539
TTCCCCGTCTGGACCCAACCAGAGATCC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AGACCTGTGGCCCTCTTTGGAGTTCCGG
1._JA_4_/7_[POU]
AGACCTGTCGCC__CT__GG______GG
2._JA_4_/7_[POU]
AGACCTGTCGCC__CT__GG______GG
3._JA_4_/7_[POU]
AGACCTGTCGCC__CT__GG______GG
4._JA_4_/7_[POU]
AGACCTGTCGCC__CT__GG______GG
5._JA_4_/7_[POU]
AGACCTGTCGCC__CT__GG______GG
6._MARPER_18
AGACCTGTCGCC__CT__GG______GG
7._GC-08-284-8-56
AGACCTGTCGCCCTCTCTGGAGTTCCGG
8._GC-08-284-8-56
AGACCTGTCGCCCTCTCTGGAGTTCCGG
9._RUQ_414
AGACCTGTGGCCCCTTCTGTAGTTCCGG
10._COCA_3310_/3_[CHA]
AGACCTGTCGAC__CT__GG______GG
11._COCA_3310_/3_[CHA]
AGACCTGTCGAC__CT__GG______GG
12._UF_29
AGACCTGTCGAC__CT__GG______GG
13._UF_29
AGACCTGTCGAC__CT__GG______GG
14._UF_29
AGACCTGTCGAC__CT__GG______GG
15._UF_29
AGACCTGTCGAC__CT__GG______GG
16._UF_29
AGACCTGTCGAC__CT__GG______GG
17._UF_29
AGACCTGTCGAC__CT__GG______GG
18._UF_29
AGACCTGTCGAC__CT__GG______GG
19._UF_29
AGACCTGTCGAC__CT__GG______GG
20._UF_29
AGACCTGTCGAC__CT__GG______GG
21._UF_29
AGACCTGTCGAC__CT__GG______GG
22._UF_29
AGACCTGTCGAC__CT__GG______GG
23._UF_29
AGACCTGTCGAC__CT__GG______GG
24._UF_29
AGACCTGTCGAC__CT__GG______GG
25._UF_29
AGACCTGTCGAC__CT__GG______GG
26._COCA_3310_/3_[CHA]
AGACCTGTCGAC__CT__GG______GG
27._UF_29
AGACCTGTCGAC__CT__GG______GG
28._RUQ_1539
AGACCTGTCGCCCTTTCTGTAGTTACGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGTTAAAACCCCGGAGTTGTCTCTCTCG
1._JA_4_/7_[POU]
__CT__AA__CC______GT____CTCG
2._JA_4_/7_[POU]
__CT__AA__CC______GT____CTCG
3._JA_4_/7_[POU]
__CT__AA__CC______GT____CTCG
4._JA_4_/7_[POU]
__CT__AA__CC______GT____CTCG
5._JA_4_/7_[POU]
__CT__AA__CC______GT____CTCG
6._MARPER_18
GGCT__AA__CC______GT____CTCG
7._GC-08-284-8-56
GGCTAGAACTCCGGAGTTGTTTCTCTCG
8._GC-08-284-8-56
GGCTAGAACTCCGGAGTTGTTTCTCTCG
9._RUQ_414
GGTT__AGCCCCGGAGTTGTCTCTCTCG
10._COCA_3310_/3_[CHA]
__CT__AG__CC______GT____CTCG
11._COCA_3310_/3_[CHA]
__CT__AG__CC______GT____CTCG
12._UF_29
__CT__AG__CC______GT____CTCG
13._UF_29
__CT__AG__CC______GT____CTCG
14._UF_29
__CT__AG__CC______GT____CTCG
15._UF_29
__CT__AG__CC______GT____CTCG
16._UF_29
__CT__AG__CC______GT____CTCG
17._UF_29
__CT__AG__CC______GT____CTCG
18._UF_29
__CT__AG__CC______GT____CTCG
19._UF_29
__CT__AG__CC______GT____CTCG
20._UF_29
__CT__AG__CC______GT____CTCG
21._UF_29
__CT__AG__CC______GT____CTCG
22._UF_29
__CT__AG__CC______GT____CTCG
23._UF_29
__CT__AG__CC______GT____CTCG
24._UF_29
__CT__AG__CC______GT____CTCG
25._UF_29
__CT__AG__CC______GT____CTCG
26._COCA_3310_/3_[CHA]
__CT__AG__CC______GT____CTCG
27._UF_29
__CT__AG__CC______GT____CTCG
28._RUQ_1539
CGTT__AG__CCGGAGTTGTCTCTCTCG
 43              
_Input profile
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._JA_4_/7_[POU]
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._JA_4_/7_[POU]
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._JA_4_/7_[POU]
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._JA_4_/7_[POU]
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._JA_4_/7_[POU]
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._MARPER_18
__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._GC-08-284-8-56
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._GC-08-284-8-56
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._RUQ_414
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._COCA_3310_/3_[CHA]
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
11._COCA_3310_/3_[CHA]
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
12._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
13._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
14._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
15._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
16._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
17._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
18._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
19._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
20._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
21._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
22._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
23._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
24._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
25._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
26._COCA_3310_/3_[CHA]
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
27._UF_29
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
28._RUQ_1539
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: JA_1_/19_[POU] RUQ_352

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom