SNP Profiles matching ICS 43

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 Key

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_Input profile
CTACACGTCTGGACCGGGCTAGAGAACC
1._RUQ_144
____ACGTCT__ACCGGGCT____AA__
2._ICS_43
____ACGTCT__AC__GGCT____AA__
 1516171819202122232425262728
_Input profile
AGCCTTTTCCAACTTTCCGTAGGTCCGG
1._RUQ_144
AGCCTTTTCCAA__TT__GT______GG
2._ICS_43
AGCCTTTTCCAA__TT__GT______GG
 29303132333435363738394041 
_Input profile
CGCCAACTGTAGATGTCTCTCTGGAGX_X
1._RUQ_144
__CCAACT______GT____CTGGAGX_X
2._ICS_43
__CCAACT______GT____CTGGAGX_X

Input profile: ICS_43 RUQ_144

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._ICS_43 RUQ_144

identical
24 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

2._ICS_43

identical
23 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block3
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP1060 33TcSNP1063 34TcSNP1111 35TcSNP1126
36TcSNP1253 37TcSNP1309 38TcSNP1439 39TcSNP1442 40TcSNP1458
41TcSNP1484