SNP Profiles matching PA 303 [PER]

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 Key

 1234567891011121314
_Input profile
CCCCAGAAAAGGGGCCAAGGGGAAGGAC
1._RUQ_36
AACCAAAAAAGGGGCCAAGGGGAAGGAC
2._RUQ_1621
AACCAAAAAAGGGGCCAAGGGGAAGGAC
3._MITC-000400
AACCAAAAAAGGGGCCAAGGGGAAGGAC
4._PA_137_[PER]_Fld#_201_Plt#_2
AACCAAAAAAGGGGCCAAGGGGAAGGAC
5._RUQ_952
AACCAGACAAGGGGCCAAGGGGAAGGAC
6._RUQ_1092
CCACAAAAAAGGAGCCAAGGGGAAAGAC
 1516171819202122232425262728
_Input profile
AAAAAAGGCCGGAAAGACAGCGGGACAG
1._RUQ_36
AAAAAGGGACGGAAGGACAGGGGGACAG
2._RUQ_1621
AAAAAAGGACGGAAAGACAGGGGGCCGG
3._MITC-000400
AAAAAGGGACGGAAGGACAGGGGGACAG
4._PA_137_[PER]_Fld#_201_Plt#_2
AAAAAGGGACGGAAGGACAGGGGGACAG
5._RUQ_952
AAAAGGGGCCGGAAAGACAGCCGGACAG
6._RUQ_1092
AAAAAGAGCCGGAAGGACAGCCGGCCAG
 2930313233343536373839404142
_Input profile
GGTTGGAAGGAGGGGGGGCCTTATGGGG
1._RUQ_36
GGTTGGACGGAGGGGGGGCCTTATGGGG
2._RUQ_1621
AGTTGGAAGGGGGGGGGGCCTTATGGGG
3._MITC-000400
GGTTGGACGGAGGGGGGGCCTTATGGGG
4._PA_137_[PER]_Fld#_201_Plt#_2
GGTTGGACGGAGGGGGGGCCTTATGGGG
5._RUQ_952
GGTTGGAAGGGGGGGGGGCCTTATGGGG
6._RUQ_1092
GGTTGGACGGAGGGGGGGCCTTAAGGGG
 4344454647484950515253545556
_Input profile
AAAGAGGGGGATGGGGCCAAAGCCGGCG
1._RUQ_36
AAGGAGGGGGATGGGGCCACGGCCAGCG
2._RUQ_1621
AAAAAGGGGGATGGGGCCACAACCGGCG
3._MITC-000400
AAGGAGGGGGATGGGGCCACGGCCAGCG
4._PA_137_[PER]_Fld#_201_Plt#_2
AAGGAGGGGGATGGGGCCACGGCCAGCG
5._RUQ_952
AAGGAGGGGGATGGGGCCAAAGCCAGCG
6._RUQ_1092
AAAGGGGGGGATGGGGCCACAACCGGCG
 5758596061626364656667686970
_Input profile
CCGGAAAAAGAACCAGAAACCCAAAACG
1._RUQ_36
CCGGAAAAAGAACCGGAAACCCAAAACG
2._RUQ_1621
CCGGAAAAGGAACCAGAAACCCAAAAGG
3._MITC-000400
CCGGAAAAAGAACCGGAAACCCAAAACG
4._PA_137_[PER]_Fld#_201_Plt#_2
CCGGAAAAAGAACCGGAAACCCAAAACG
5._RUQ_952
CCGGAAAAGGAACCAGAAAACCAAAACC
6._RUQ_1092
CCGGAGAAAGAACCAAAAACCCAAAACG
 717273747576777879808182  
_Input profile
AGCCGGGGAGCCAGCGGGAAGGAGX_XX_X
1._RUQ_36
AGCCGGGGGGCCAGCGGGAAAGAGX_XX_X
2._RUQ_1621
AGCCGGGGGGCCAGCGGGAAGGAGX_XX_X
3._MITC-000400
AGCCGGGGGGCCAGCGGGAAAGAGX_XX_X
4._PA_137_[PER]_Fld#_201_Plt#_2
AGCCGGGGGGCCAGCGGGAAAGAGX_XX_X
5._RUQ_952
GGCCGGGGGGCCAGCCGGAAAGAGX_XX_X
6._RUQ_1092
AGCCGGGGAGCCAGCGGGAAGGAGX_XX_X

Input profile: PA_303_[PER] PA_303_[PER]_Fld#_21_Plt#_1

 
USDA-TARS, United States of America
Location: Field: 21, Tree: 1
 Mars, 2018

1._PA_137_[PER] RUQ_36

90.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

2._PA_299_[PER] RUQ_1621

90.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._PA_137_[PER] MITC-000400

90.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

4._PA_137_[PER] PA_137_[PER]_Fld#_201_Plt#_2

90.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 201, Tree: 2
 Mars, 2018

5._PA_289_[PER] RUQ_952

90.2 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

6._SLA_16 RUQ_1092

90.2 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998