SNP Profiles matching UF 667

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 Key

 1234567891011121314
_Input profile
ACACAGAAAGAGAAACAAGGAGAAAAAC
1._RUQ_55
ACACAGAAAGAGAAACAAGGAGAAAAAC
2._RUQ_56
ACACAGAAAGAGAAACAAGGAGAAAAAC
3._MITC-000064
ACACAGAAAGAGAAACAAGGAGAAAAAC
4._CC_10_Fld#_47_Plt#_5
ACACAGAAAGAGAAACAAGGAGAAAAAC
5._CC_10_Fld#_47A_Plt#_4
ACACAGAAAGAGAAACAAGGAGAAAAAC
6._UF_10_Fld#_87_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
7._UF_668_Fld#_118_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
8._UF_676_Fld#_180_Plt#_2
ACACAGAAAGAGAAACAAGGAGAAAAAC
9._RUQ_1160
ACACAGAAAGAGAAACAAGGAGAAAAAC
10._EET_236_[ECU]_Fld#_143_Plt#_2
ACACAGAAAGAGAAACAAGGAGAAAAAC
11._EET_263_[ECU]_Fld#_143_Plt#_5
ACACAGAAAGAGAAACAAGGAGAAAAAC
12._EET_381_[ECU]_Fld#_38_Plt#_5
ACACAGAAAGAGAAACAAGGAGAAAAAC
13._P_22_[MEX]_Fld#_35_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
14._P_43_[MEX]_Fld#_107_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
15._RIM_34_[MEX]_Fld#_131_Plt#_5
ACACAGAAAGAGAAACAAGGAGAAAAAC
16._RIM_6_[MEX]_Fld#_31_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
17._RIM_75_[MEX]_Fld#_11_Plt#_5
ACACAGAAAGAGAAACAAGGAGAAAAAC
18._RIM_78_[MEX]_Fld#_33_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
19._RIM10_[MEX]_Fld#_10_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
20._TSAN_812_Fld#_75_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
21._EET_353_[ECU]__Fld#_42B_Plt#_1
ACACAGAAAGAGAAACAAGGAGAAAAAC
22._UF_122_Fld#_72_Plt#_5
ACACAGAAAGAGAAACAAGGAGAAAAAC
23._UF_221_Fld#_102_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
24._GC-08-49-1-60
ACCCAGAAAGAGAAACAAGGAGAAAAAC
25._RUQ_1432
ACCCAGAAAGAGAAACAAGGAGAAAAAC
26._MITC-000399
ACACAGAAAGAGAAACAAGGAGAAAAAC
27._RUQ_959
ACCCAGAAAGAGAAACAAGGAGAAAAAC
28._RUQ_146
ACACAGAAAGAGAAACAAGGAGAAAAAC
29._ICS_39_Fld#_30_Plt#_2
ACACAGAAAGAGAAACAAGGAGAAAAAC
30._Pound_7_[POU]_Fld#_114B_Plt#_4
ACACAGAAAGAGAAACAAGGAGAAAAAC
31._Pound_7_[POUT]_Fld#_114A_Plt#_1
ACACAGAAAGAGAAACAAGGAGAAAAAC
32._SIC_72_Fld#_49_Plt#_5
ACACAGAAAGAGAAACAAGGAGAAAAAC
33._RUQ_51
ACACAGAAAGAGAAACAAGGAGAAAAAC
34._RUQ_938
ACCCAGAAAGAGAAACAAGGAGAAAAAC
35._RUQ_41
ACACAGAAAGAGAAACAAGGAGAAAAAC
36._RUQ_690
ACACAGAAAGAGAAACAAGGAGAAAAAC
37._GS_29_Fld#_78_Plt#_5
ACACAGAAAGAGAAACAAGGAGAAAAAC
38._GS_7_Fld#_127_Plt#_6
ACACAGAAAGAGAAACAAGGAGAAAAAC
39._GC-02-002-1-2
ACACAGAAAGAGAAACAAGGGGAAAAAC
40._RUQ_1144
ACACAGAAAGAGAAACAAGGGGAAAAAC
41._MITC-000342
ACACAGAAAGAGAAACAAGGGGAAAAAC
42._ICS_95_Fld#_13_Plt#_1
ACACAGAAAGAGAAACAAGGGGAAAAAC
43._ICS_41_Fld#_15_Plt#_1
ACACGGAAAGAGAAAAAAGGGGAAAAAC
 1516171819202122232425262728
_Input profile
AGAAGGAGAAGGAAAGACAGCGAGACAG
1._RUQ_55
AGAAGGAGAAGGAAAGACAGCGAGACAG
2._RUQ_56
AGAAGGAGAAGGAAAGACAGCGAGACAG
3._MITC-000064
AGAAGGAGAAGGAAAGACAGCGAGACAG
4._CC_10_Fld#_47_Plt#_5
AGAAGGAGAAGGAAAGACAGCGAGACAG
5._CC_10_Fld#_47A_Plt#_4
AGAAGGAGAAGGAAAGACAGCGAGACAG
6._UF_10_Fld#_87_Plt#_6
AGAAGGAGAAGGAAAGACAGCGAGACAG
7._UF_668_Fld#_118_Plt#_6
AGAAGGAGAAGGAAAGACAGCGAGACAG
8._UF_676_Fld#_180_Plt#_2
AGAAGGAGAAGGAAAGACAGCGAGACAG
9._RUQ_1160
AGAAGGAGAAGGAAAGACAGCCAGACAG
10._EET_236_[ECU]_Fld#_143_Plt#_2
AGAAGGAGAAGGAAAGACAGCCAGACAG
11._EET_263_[ECU]_Fld#_143_Plt#_5
AGAAGGAGAAGGAAAGACAGCCAGACAG
12._EET_381_[ECU]_Fld#_38_Plt#_5
AGAAGGAGAAGGAAAGACAGCCAGACAG
13._P_22_[MEX]_Fld#_35_Plt#_6
AGAAGGAGAAGGAAAGACAGCCAGACAG
14._P_43_[MEX]_Fld#_107_Plt#_6
AGAAGGAGAAGGAAAGACAGCCAGACAG
15._RIM_34_[MEX]_Fld#_131_Plt#_5
AGAAGGAGAAGGAAAGACAGCCAGACAG
16._RIM_6_[MEX]_Fld#_31_Plt#_6
AGAAGGAGAAGGAAAGACAGCCAGACAG
17._RIM_75_[MEX]_Fld#_11_Plt#_5
AGAAGGAGAAGGAAAGACAGCCAGACAG
18._RIM_78_[MEX]_Fld#_33_Plt#_6
AGAAGGAGAAGGAAAGACAGCCAGACAG
19._RIM10_[MEX]_Fld#_10_Plt#_6
AGAAGGAGAAGGAAAGACAGCCAGACAG
20._TSAN_812_Fld#_75_Plt#_6
AGAAGGAGAAGGAAAGACAGCCAGACAG
21._EET_353_[ECU]__Fld#_42B_Plt#_1
AGAAGGAGAAGGAAAGACAGCCAGACAG
22._UF_122_Fld#_72_Plt#_5
AGAAGGAGAAGGAAAGACAGCCAGACAG
23._UF_221_Fld#_102_Plt#_6
AGAAGGAGAAGGAAAGACAGCCAGACAG
24._GC-08-49-1-60
AGAAGGAGAAGGAAAGACAGCCAGACAG
25._RUQ_1432
AGAAGGAGAAGGAAAGACAGCCAGACAG
26._MITC-000399
AGAAGGAGAAGGAAAGACAGCCAGACAG
27._RUQ_959
AG_GGGGAAGGAAAGACAGCCAGACAG
28._RUQ_146
AGAAGGAGAAGGAAAGACAGCCAGACAG
29._ICS_39_Fld#_30_Plt#_2
AGAAGGAGAAGGAAAGACAGCCAGACAG
30._Pound_7_[POU]_Fld#_114B_Plt#_4
AGAAGGAGAAGGAAAGACAGCCAGACAG
31._Pound_7_[POUT]_Fld#_114A_Plt#_1
AGAAGGAGAAGGAAAGACAGCCAGACAG
32._SIC_72_Fld#_49_Plt#_5
AGAAGGAGAAGGAAAGACAGCCAGACAG
33._RUQ_51
AG_GGAGAAGGAAAGACAGCCGGACAG
34._RUQ_938
AGAAGGAGAAGGAAAGACAGCCAGACAG
35._RUQ_41
AGAAGGAGAAGGAAAGACAGCCAGACAG
36._RUQ_690
AGAAGGAGAAGGAAAGACAGCCAGACAG
37._GS_29_Fld#_78_Plt#_5
GGAAGGAGAAGGAAAGACAGCCAGCCAG
38._GS_7_Fld#_127_Plt#_6
GGAAGGAGAAGGAAAGACAGCCAGCCAG
39._GC-02-002-1-2
GGAAGGAGAAGGAAAGACAACCAGACAG
40._RUQ_1144
GGAAGGAGAAGGAAAGACAACCAGACAG
41._MITC-000342
GGAAGGAGAAGGAAAGACAACCAGACAG
42._ICS_95_Fld#_13_Plt#_1
GGAAGGAGAAGGAAAGACAACCAGACAG
43._ICS_41_Fld#_15_Plt#_1
AGAAGGAGAAGGAAGGACAGCCAGCCAG
 2930313233343536373839404142
_Input profile
AGATAGACCGAGGGAGGGCCATATAGAG
1._RUQ_55
AGATAGACCGAGGGAGGGCCATATAGAG
2._RUQ_56
AGATAGACCGAGGGAGGGCCATATAGAG
3._MITC-000064
AGATAGACCGAGGGAGGGCCATATAGAG
4._CC_10_Fld#_47_Plt#_5
AGATAGACCGAGGGAGGGCCATATAGAG
5._CC_10_Fld#_47A_Plt#_4
AGATAGACCGAGGGAGGGCCATATAGAG
6._UF_10_Fld#_87_Plt#_6
AGATAGACCGAGGGAGGGCCATATAGAG
7._UF_668_Fld#_118_Plt#_6
AGATAGACCGAGGGAGGGCCATATAGAG
8._UF_676_Fld#_180_Plt#_2
AGATAGACCGAGGGAGGGCCATATAGAG
9._RUQ_1160
AGATAGACCGAGGGAGGGCCATATAGAG
10._EET_236_[ECU]_Fld#_143_Plt#_2
AGATAGACCGAGGGAGGGCCATATAGAG
11._EET_263_[ECU]_Fld#_143_Plt#_5
AGATAGACCGAGGGAGGGCCATATAGAG
12._EET_381_[ECU]_Fld#_38_Plt#_5
AGATAGACCGAGGGAGGGCCATATAGAG
13._P_22_[MEX]_Fld#_35_Plt#_6
AGATAGACCGAGGGAGGGCCATATAGAG
14._P_43_[MEX]_Fld#_107_Plt#_6
AGATAGACCGAGGGAGGGCCATATAGAG
15._RIM_34_[MEX]_Fld#_131_Plt#_5
AGATAGACCGAGGGAGGGCCATATAGAG
16._RIM_6_[MEX]_Fld#_31_Plt#_6
AGATAGACCGAGGGAGGGCCATATAGAG
17._RIM_75_[MEX]_Fld#_11_Plt#_5
AGATAGACCGAGGGAGGGCCATATAGAG
18._RIM_78_[MEX]_Fld#_33_Plt#_6
AGATAGACCGAGGGAGGGCCATATAGAG
19._RIM10_[MEX]_Fld#_10_Plt#_6
AGATAGACCGAGGGAGGGCCATATAGAG
20._TSAN_812_Fld#_75_Plt#_6
AGATAGACCGAGGGAGGGCCATATAGAG
21._EET_353_[ECU]__Fld#_42B_Plt#_1
AGATAGACCGAGGGAGGGCCATATAGAG
22._UF_122_Fld#_72_Plt#_5
AGATAGACCGAGGGAGGGCCATATAGAG
23._UF_221_Fld#_102_Plt#_6
AGATAGACCGAGGGAGGGCCATATAGAG
24._GC-08-49-1-60
AGATAGACCGAGGGAGGGCCATATAGAG
25._RUQ_1432
AGATAGACCGAGGGAGGGCCATATAGAG
26._MITC-000399
AGATAGACCGAGGGAGGGCCATATAGAG
27._RUQ_959
AGATAGACCGAGGGAGGGCCATATAGAG
28._RUQ_146
AGATAGACCGAGGGAGGGCCATATAGAG
29._ICS_39_Fld#_30_Plt#_2
AGATAGACCGAGGGAGGGCCATATAGAG
30._Pound_7_[POU]_Fld#_114B_Plt#_4
AGATAGACCGAGGGAGGGCCATATAGAG
31._Pound_7_[POUT]_Fld#_114A_Plt#_1
AGATAGACCGAGGGAGGGCCATATAGAG
32._SIC_72_Fld#_49_Plt#_5
AGATAGACCGAGGGAGGGCCATATAGAG
33._RUQ_51
AGATAGACCGAGGGAGGGCCATATAGAG
34._RUQ_938
AGATAGACCGAGGGAGGGCCATATAGAG
35._RUQ_41
AGATAGACCGAGGGAGGGCCATATAGAG
36._RUQ_690
AGATAGACCGAGGGAGGGCCATATAGAG
37._GS_29_Fld#_78_Plt#_5
AGATAAACCGAGGGAGGGCCATATAGAG
38._GS_7_Fld#_127_Plt#_6
AGATAAACCGAGGGAGGGCCATATAGAG
39._GC-02-002-1-2
AGATAGACCGGGGGAGGGCCATATAGAA
40._RUQ_1144
AGATAGACCGGGGGAGGGCCATATAGAA
41._MITC-000342
AGATAGACCGGGGGAGGGCCATATAGAA
42._ICS_95_Fld#_13_Plt#_1
AGATAGACCGGGGGAGGGCCATATAGAA
43._ICS_41_Fld#_15_Plt#_1
AGATAACCCGAGGGAGGGCCATATAGAG
 4344454647484950515253545556
_Input profile
ATAGAGAGGGATCGAGCCCCGGACAACC
1._RUQ_55
ATAGAGAGGGATCGAGCCCCGGACAACC
2._RUQ_56
ATAGAGAGGGATCGAGCCCCGGACAACC
3._MITC-000064
ATAGAGAGGGATCGAGCCCCGGACAACC
4._CC_10_Fld#_47_Plt#_5
ATAGAGAGGGATCGAGCCCCGGACAACC
5._CC_10_Fld#_47A_Plt#_4
ATAGAGAGGGATCGAGCCCCGGACAACC
6._UF_10_Fld#_87_Plt#_6
ATAGAGAGGGATCGAGCCCCGGACAACC
7._UF_668_Fld#_118_Plt#_6
ATAGAGAGGGATCGAGCCCCGGACAACC
8._UF_676_Fld#_180_Plt#_2
ATAGAGAGGGATCGAGCCCCGGACAACC
9._RUQ_1160
ATAGAGAGGGATCGAGCCCCGGACAACC
10._EET_236_[ECU]_Fld#_143_Plt#_2
ATAGAGAGGGATCGAGCCCCGGACAACC
11._EET_263_[ECU]_Fld#_143_Plt#_5
ATAGAGAGGGATCGAGCCCCGGACAACC
12._EET_381_[ECU]_Fld#_38_Plt#_5
ATAGAGAGGGATCGAGCCCCGGACAACC
13._P_22_[MEX]_Fld#_35_Plt#_6
ATAGAGAGGGATCGAGCCCCGGACAACC
14._P_43_[MEX]_Fld#_107_Plt#_6
ATAGAGAGGGATCGAGCCCCGGACAACC
15._RIM_34_[MEX]_Fld#_131_Plt#_5
ATAGAGAGGGATCGAGCCCCGGACAACC
16._RIM_6_[MEX]_Fld#_31_Plt#_6
ATAGAGAGGGATCGAGCCCCGGACAACC
17._RIM_75_[MEX]_Fld#_11_Plt#_5
ATAGAGAGGGATCGAGCCCCGGACAACC
18._RIM_78_[MEX]_Fld#_33_Plt#_6
ATAGAGAGGGATCGAGCCCCGGACAACC
19._RIM10_[MEX]_Fld#_10_Plt#_6
ATAGAGAGGGATCGAGCCCCGGACAACC
20._TSAN_812_Fld#_75_Plt#_6
ATAGAGAGGGATCGAGCCCCGGACAACC
21._EET_353_[ECU]__Fld#_42B_Plt#_1
ATAGAGAGGGATCGAGCCCCGG_AACC
22._UF_122_Fld#_72_Plt#_5
ATAGGGGGGGATCGAGCCCCGGACAACC
23._UF_221_Fld#_102_Plt#_6
ATAGGGGGGGATCGAGCCCCGGACAACC
24._GC-08-49-1-60
ATAGAGAGGGATCGAGCCCCGGACAACC
25._RUQ_1432
ATAGAGAGGGATCGAGCCCCGGACAACC
26._MITC-000399
ATAGAGAGGGATCGAGCCCCGGACAACG
27._RUQ_959
ATAGAGAGGGATCGAGCCCCGGACAACG
28._RUQ_146
ATAGAGAGGGATCGAGCCCCGGACAACG
29._ICS_39_Fld#_30_Plt#_2
ATAGAGAGGGATCGAGCCCCGGACAACG
30._Pound_7_[POU]_Fld#_114B_Plt#_4
ATAGAGAGGGATCGAGCCCCGGACAACG
31._Pound_7_[POUT]_Fld#_114A_Plt#_1
ATAGAGAGGGATCGAGCCCCGGACAACG
32._SIC_72_Fld#_49_Plt#_5
ATAGAGAGGGATCGAGCCCCGGACAACG
33._RUQ_51
ATAGAGAGGGATCGGGCCCCGGACAACC
34._RUQ_938
ATAGAGAGGGAACGAGCCCCGGACAACG
35._RUQ_41
ATAGAGAGGGATCGAGCCCCGGACAACG
36._RUQ_690
ATAGAGAGGGATCGAGCCCCGGACAACG
37._GS_29_Fld#_78_Plt#_5
ATAGAGAGGGAACGAGCCCCGGACAACG
38._GS_7_Fld#_127_Plt#_6
ATAGAGAGGGAACGAGCCCCGGACAACG
39._GC-02-002-1-2
ATAGAGAGGGAACGAGCCCCGGACAACC
40._RUQ_1144
ATAGAGAGGGAACGAGCCCCGGACAACC
41._MITC-000342
ATAGAGAGGGAACGAGCCCCGGACAACC
42._ICS_95_Fld#_13_Plt#_1
ATAGAGAGGGAACGAGCCCCGGACAACC
43._ICS_41_Fld#_15_Plt#_1
ATAGAAAGGGATCGAGCCCCGGACAACC
 5758596061626364656667686970
_Input profile
ACAGGGAGAGAGACAGAGACACACACCC
1._RUQ_55
ACAGGGAGAGAGACAGAGACACACACCC
2._RUQ_56
ACAGGGAGAGAGACAGAGACACACACCC
3._MITC-000064
ACAGGGAGAGAGACAGAGACACACACCC
4._CC_10_Fld#_47_Plt#_5
ACAGGGAGAGAGACAGAGACACACACCC
5._CC_10_Fld#_47A_Plt#_4
ACAGGGAGAGAGACAGAGACACACACCC
6._UF_10_Fld#_87_Plt#_6
ACAGGGAGAGAGACAGAGACACACACCC
7._UF_668_Fld#_118_Plt#_6
ACAGGGAGAGAGACAGAGACACACACCC
8._UF_676_Fld#_180_Plt#_2
ACAGGGAGAGAGACAGAGACACACACCC
9._RUQ_1160
ACAGGGAGAGAGACAGAGACACACACCC
10._EET_236_[ECU]_Fld#_143_Plt#_2
ACAGGGAGAGAGACAGAGACACACACCC
11._EET_263_[ECU]_Fld#_143_Plt#_5
ACAGGGAGAGAGACAGAGACACACACCC
12._EET_381_[ECU]_Fld#_38_Plt#_5
ACAGGGAGAGAGACAGAGACACACACCC
13._P_22_[MEX]_Fld#_35_Plt#_6
ACAGGGAGAGAGACAGAGACACACACCC
14._P_43_[MEX]_Fld#_107_Plt#_6
ACAGGGAGAGAGACAGAGACACACACCC
15._RIM_34_[MEX]_Fld#_131_Plt#_5
ACAGGGAGAGAGACAGAGACACACACCC
16._RIM_6_[MEX]_Fld#_31_Plt#_6
ACAGGGAGAGAGACAGAGACACACACCC
17._RIM_75_[MEX]_Fld#_11_Plt#_5
ACAGGGAGAGAGACAGAGACACACACCC
18._RIM_78_[MEX]_Fld#_33_Plt#_6
ACAGGGAGAGAGACAGAGACACACACCC
19._RIM10_[MEX]_Fld#_10_Plt#_6
ACAGGGAGAGAGACAGAGACACACACCC
20._TSAN_812_Fld#_75_Plt#_6
ACAGGGAGAGAGACAGAGACACACACCC
21._EET_353_[ECU]__Fld#_42B_Plt#_1
ACAGGGAGAGAGACAGAGACACACACCC
22._UF_122_Fld#_72_Plt#_5
ACAGGGAGAGAGACAGAGACACACACCC
23._UF_221_Fld#_102_Plt#_6
ACAGGGAGAGAGACAGAGACACACACCC
24._GC-08-49-1-60
ACAGGGAGAGAGACAGAGACACACCCCC
25._RUQ_1432
ACAGGGAGAGAGACAGAGACACACCCCC
26._MITC-000399
ACAGAGAGAGAGACAGAGACACACACCC
27._RUQ_959
ACAGAGAGAGAGACAGAGACACACACCC
28._RUQ_146
ACAGGGAGAAAGAAAGAGACCCACACCC
29._ICS_39_Fld#_30_Plt#_2
ACAGGGAGAAAGAAAGAGACCCACACCC
30._Pound_7_[POU]_Fld#_114B_Plt#_4
ACAGGGAGAAAGAAAGAGACCCACACCC
31._Pound_7_[POUT]_Fld#_114A_Plt#_1
ACAGGGAGAAAGAAAGAGACCCACACCC
32._SIC_72_Fld#_49_Plt#_5
ACAGGGAGAAAGAAAGAGACCCACACCC
33._RUQ_51
ACAGGGGGAGAGACAGAGAAACACACCC
34._RUQ_938
CCAGGGAGAGAGACAAAGACCCACACCC
35._RUQ_41
CCAGAGAGAGAGACAGAGACACACCCCC
36._RUQ_690
CCAGAGAGAGAGACAGAGACACACCCCC
37._GS_29_Fld#_78_Plt#_5
ACAGAGAGAAAGACAGAGACACACACCC
38._GS_7_Fld#_127_Plt#_6
ACAGAGAGAAAGACAGAGACACACACCC
39._GC-02-002-1-2
CCAGAGAGAAAGAAAGAGACACACACCC
40._RUQ_1144
CCAGAGAGAAAGAAAGAGACACACACCC
41._MITC-000342
CCAGAGAGAAAGAAAGAGACACACACCC
42._ICS_95_Fld#_13_Plt#_1
CCAGAGAGAAAGAAAGAGACACACACCC
43._ICS_41_Fld#_15_Plt#_1
CCAGGGAGAAAGAAAGGGACACACCCCC
 717273747576777879808182  
_Input profile
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
1._RUQ_55
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
2._RUQ_56
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
3._MITC-000064
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
4._CC_10_Fld#_47_Plt#_5
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
5._CC_10_Fld#_47A_Plt#_4
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
6._UF_10_Fld#_87_Plt#_6
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
7._UF_668_Fld#_118_Plt#_6
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
8._UF_676_Fld#_180_Plt#_2
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
9._RUQ_1160
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
10._EET_236_[ECU]_Fld#_143_Plt#_2
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
11._EET_263_[ECU]_Fld#_143_Plt#_5
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
12._EET_381_[ECU]_Fld#_38_Plt#_5
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
13._P_22_[MEX]_Fld#_35_Plt#_6
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
14._P_43_[MEX]_Fld#_107_Plt#_6
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
15._RIM_34_[MEX]_Fld#_131_Plt#_5
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
16._RIM_6_[MEX]_Fld#_31_Plt#_6
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
17._RIM_75_[MEX]_Fld#_11_Plt#_5
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
18._RIM_78_[MEX]_Fld#_33_Plt#_6
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
19._RIM10_[MEX]_Fld#_10_Plt#_6
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
20._TSAN_812_Fld#_75_Plt#_6
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
21._EET_353_[ECU]__Fld#_42B_Plt#_1
AGCGGGGGAGACAAGGAGAAAGAGX_XX_X
22._UF_122_Fld#_72_Plt#_5
AGCGGGGGAGACAAGGGGAAAGAGX_XX_X
23._UF_221_Fld#_102_Plt#_6
AGCGGGGGAGACAAGGGGAAAGAGX_XX_X
24._GC-08-49-1-60
AGCGGGGGGGACAAGGAGAAAGAAX_XX_X
25._RUQ_1432
AGCGGGGGGGACAAGGAGAAAGAAX_XX_X
26._MITC-000399
AGCCGGGGGGACAAGGAGAAAGAAX_XX_X
27._RUQ_959
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
28._RUQ_146
AGCGGGGGGGACAAGGAGAAAGAAX_XX_X
29._ICS_39_Fld#_30_Plt#_2
AGCGGGGGGGACAAGGAGAAAGAAX_XX_X
30._Pound_7_[POU]_Fld#_114B_Plt#_4
AGCGGGGGGGACAAGGAGAAAGAAX_XX_X
31._Pound_7_[POUT]_Fld#_114A_Plt#_1
AGCGGGGGGGACAAGGAGAAAGAAX_XX_X
32._SIC_72_Fld#_49_Plt#_5
AGCGGGGGGGACAAGGAGAAAGAAX_XX_X
33._RUQ_51
AGCGGGGGAGCCAAGGAGAAGGAGX_XX_X
34._RUQ_938
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
35._RUQ_41
AGCCGGGGGGACAAGGAGAAAGAAX_XX_X
36._RUQ_690
AGCCGGGGGGACAAGGAGAAAGAAX_XX_X
37._GS_29_Fld#_78_Plt#_5
AGCCGGGGAGACAAGGAGAAAGAAX_XX_X
38._GS_7_Fld#_127_Plt#_6
AGCCGGGGAGACAAGGAGAAAGAAX_XX_X
39._GC-02-002-1-2
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
40._RUQ_1144
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
41._MITC-000342
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
42._ICS_95_Fld#_13_Plt#_1
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
43._ICS_41_Fld#_15_Plt#_1
AGCGGGGGAGACAAGGAAAAAGAGX_XX_X

Input profile: UF_667 GC-01-29-2-6

 
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 6, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

1._UF_667 RUQ_55

identical
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

2._UF_676 RUQ_56

identical
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._UF_676 MITC-000064

identical
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

4._CC_10 CC_10_Fld#_47_Plt#_5

identical
82 shared markers

USDA-TARS, United States of America
Location: Field: 47, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

5._CC_10 CC_10_Fld#_47A_Plt#_4

identical
82 shared markers

USDA-TARS, United States of America
Location: Field: 47A, Tree: 4
 Mars, 2018

6._UF_10 UF_10_Fld#_87_Plt#_6

identical
82 shared markers

USDA-TARS, United States of America
Location: Field: 87, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

7._UF_668 UF_668_Fld#_118_Plt#_6

identical
82 shared markers

USDA-TARS, United States of America
Location: Field: 118, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

8._UF_676 UF_676_Fld#_180_Plt#_2

identical
82 shared markers

USDA-TARS, United States of America
Location: Field: 180, Tree: 2
 Mars, 2018

9._OC_77_[VEN] RUQ_1160

99.4 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

10._EET_236_[ECU] EET_236_[ECU]_Fld#_143_Plt#_2

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 143, Tree: 2
 Mars, 2018

11._EET_263_[ECU] EET_263_[ECU]_Fld#_143_Plt#_5

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 143, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

12._EET_381_[ECU] EET_381_[ECU]_Fld#_38_Plt#_5

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 38, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

13._P_22_[MEX] P_22_[MEX]_Fld#_35_Plt#_6

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 35, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

14._P_43_[MEX] P_43_[MEX]_Fld#_107_Plt#_6

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 107, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

15._RIM_34_[MEX] RIM_34_[MEX]_Fld#_131_Plt#_5

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 131, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

16._RIM_6_[MEX] RIM_6_[MEX]_Fld#_31_Plt#_6

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 31, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

17._RIM_75_[MEX] RIM_75_[MEX]_Fld#_11_Plt#_5

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 11, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

18._RIM_78_[MEX] RIM_78_[MEX]_Fld#_33_Plt#_6

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 33, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

19._RIM_10_[MEX] RIM10_[MEX]_Fld#_10_Plt#_6

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 10, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

20._TSAN_812 TSAN_812_Fld#_75_Plt#_6

99.4 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 75, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

21._EET_353_[ECU] EET_353_[ECU]__Fld#_42B_Plt#_1

99.4 %
81 shared markers

USDA-TARS, United States of America
Location: Field: 42B, Tree: 1
 Mars, 2018

22._UF_122 UF_122_Fld#_72_Plt#_5

97.6 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 72, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

23._UF_221 UF_221_Fld#_102_Plt#_6

97.6 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 102, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

24._ICS_6 GC-08-49-1-60

97 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 60, Tree: 2 > FP2
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

25._ICS_40 RUQ_1432

97 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

26._GS_36 MITC-000399

96.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

27._ICS_60 RUQ_959

96.3 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

28._ICS_48 RUQ_146

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

29._ICS_39 ICS_39_Fld#_30_Plt#_2

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 30, Tree: 2
 Mars, 2018

30._POUND_7 Pound_7_[POU]_Fld#_114B_Plt#_4

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 114B, Tree: 4
 Mars, 2018

31._POUND_7 Pound_7_[POUT]_Fld#_114A_Plt#_1

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 114A, Tree: 1
 Mars, 2018

32._SIC_72 SIC_72_Fld#_49_Plt#_5

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 49, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

33._SPEC_160_/9 RUQ_51

95.7 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._ICS_46 RUQ_938

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

35._SC_1_[UNK] RUQ_41

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

36._SC_20_[COL] RUQ_690

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

37._GS29_[IDN] GS_29_Fld#_78_Plt#_5

93.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 78, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

38._GS_7 GS_7_Fld#_127_Plt#_6

93.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 127, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

39._ICS_95 GC-02-002-1-2

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: 13 > FP3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

40._ICS_95 RUQ_1144

92.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

41._ICS_95 MITC-000342

92.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

42._ICS_95 ICS_95_Fld#_13_Plt#_1

92.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 13, Tree: 1
 Mars, 2018

43._ICS_41 ICS_41_Fld#_15_Plt#_1

90.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 15, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998