SNP Profiles matching POUND 5 /C

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAAAAAAAAGGAACCAAGGAAAAGGCC
1._GC-08-109-3-8
CCAAAAAAAAGGAACCAAGGAAAAGGCC
2._GC-08-71-1-93
CCAAAAAAAAGGAACCAAGGAAAAAACC
3._GC-01-52-3-7
CCCCAAAAAAGGAACCAAGGAAAAAACC
4._ROUND_LEAF_Fld#_203_Plt#_1
CCCCAAAAAAGGAACCAAGGAAAAGGCC
5._Round_Leaf_Cacao_Fld#_203_Plt#_2
CCCCAAAAAAGGAACCAAGGAAAAGGCC
6._GC-08-277-8-49
CCAAAAAAAAGGAACCAAGGAAAAAAAA
7._GC-08-254-8-22
CCAAAAAAAAGGAACCAAGGAAAAAGCC
8._GC-06-15-1-15
CCCCAAAAAAGGAACCAAGGAAAAAACC
9._GC-08-63-1-85
CCACAAAAAAGGAACCAAGGAAAAAACC
10._RUQ_1715
CCAAAAAAAAGGAACCAAGGAAAAAACC
11._MITC-000114
CCAAAAAAAAGGAACCAAGGAAAAAACC
12._SIC_1_Fld#_51_Plt#_5
CCAAAAAAAAGGAACCAAGGGGAAAACC
13._GC-01-41-2-18
CCACAAAAAAGGAACCAAGGAAAAAACC
14._GC-01-48-3-3
CCACAAAAAAGGAACCAAGGAAAAAACC
15._SIC_2_Fld#_120_Plt#_6
CCAAAAAAAAGGAACCAAGGGGAAAACC
16._GC-08-90-2-13
CCCCAAAAAAGGAACCAAGGGGAAAACC
17._RUQ_436
CCCCAAAAAAGGAACCAAGGGGAAAACC
18._RUQ_44
CCCCAAAAAAGGAACCAAGGGGAAAACC
19._MITC-000366
CCCCAAAAAAGGAACCAAGGGGAAAACC
20._MITC-000412
CCCCAAAAAAGGAACCAAGGGGAAAACC
21._MITC-000717
CCCCAAAAAAGGAACCAAGGGGAAAACC
22._AMELONADO_[VAR]_Fld#_14_Plt#_5
CCCCAAAAAAGGAACCAAGGGGAAAACC
23._SIAL_42_Fld#_146_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
24._GC-01-56-3-11
CCCCAAAAAAGGAACCAAGGGGAAAACC
25._GC-01-39-2-16
CCCCAAAAAAGGAACCAAGGAGAAAACC
26._RUQ_1535
CCAAAAAAAAGGAACCAAGGAAAAAACC
27._RUQ_553
CCAAAAAAAAGGAACCAAGGAAAAAACC
28._CC_37_Fld#_69B_Plt#_4
CCCCAAAAAAGGAACCAAGGGGAAAACC
29._SIC_7_Fld#_68_Plt#_6
CCCCAAAAAAGGAACCAAGGGGAAAACC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
1._GC-08-109-3-8
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
2._GC-08-71-1-93
GGAAGGAA__GGAAAACCGGCCAAAAGG
3._GC-01-52-3-7
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
4._ROUND_LEAF_Fld#_203_Plt#_1
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
5._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
6._GC-08-277-8-49
AAAAGGAAAAGGAAAAACAACCGGAAGG
7._GC-08-254-8-22
AGAAGGAA__GGAAAAACAGCCAAAAGG
8._GC-06-15-1-15
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
9._GC-08-63-1-85
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
10._RUQ_1715
AAAAGGAAAAGGAAAACCGGCCAAAAGG
11._MITC-000114
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._SIC_1_Fld#_51_Plt#_5
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
13._GC-01-41-2-18
AGAAGGAAAAGGAAAAACGGCCAGAAGG
14._GC-01-48-3-3
AGAAGGAAAAGGAAAAACGGCCAGAAGG
15._SIC_2_Fld#_120_Plt#_6
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
16._GC-08-90-2-13
AAAAGGAAAAGGAAAACCGGCCAAAAGG
17._RUQ_436
AAAAGGAAAAGGAAAACCGGCCAAAAGG
18._RUQ_44
AAAAGGAAAAGGAAAACCGGCCAAAAGG
19._MITC-000366
AAAAGGAAAAGGAAAACCGGCCAAAAGG
20._MITC-000412
AAAAGGAAAAGGAAAACCGGCCAAAAGG
21._MITC-000717
AAAAGGAAAAGGAAAACCGGCCAAAAGG
22._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGAAAAGGAAAACCGGCCAAAAGG
23._SIAL_42_Fld#_146_Plt#_6
AAAAGGAAAAGGAAAACCGGCCAAAAGG
24._GC-01-56-3-11
AAAAGGAAAAGGAAAACCGGCCAAAAGG
25._GC-01-39-2-16
AAAAGGAAAAGGAAAACCGGCCAAAAGG
26._RUQ_1535
AAAAGGAAAAGGAAAACCGGCCAAAAGG
27._RUQ_553
AAAAGGAAAAGGAAAACCGGCCAAAAGG
28._CC_37_Fld#_69B_Plt#_4
AGAAGGAAACGGAAAAACGGCCAAAAGG
29._SIC_7_Fld#_68_Plt#_6
AGAAGGAAACGGAAAAACGGCCAAAAGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGCCTTTTGGGG
1._GC-08-109-3-8
AATTGGAAGGAAGGGGGG__TTTTGGGG
2._GC-08-71-1-93
AATTGGAAGGAAGGGGGGCCTTTTGGGG
3._GC-01-52-3-7
AATTGGAAGGAAGGGGGGCCTTTTGGGG
4._ROUND_LEAF_Fld#_203_Plt#_1
AATTGGAAGGAAGGGGGGCCTTTTGGGG
5._Round_Leaf_Cacao_Fld#_203_Plt#_2
AATTGGAAGGAAGGGGGGCCTTTTGGGG
6._GC-08-277-8-49
AATTGGAAGGAAGGGGGG__TTTTGGGG
7._GC-08-254-8-22
AATTGGAAGGAAGGGGGGCCTTTTGGGG
8._GC-06-15-1-15
AATTGGAAGGAAGGGGGG__TTTTGGGG
9._GC-08-63-1-85
AATTGGAAGGAAGGGGGGCCTTTTGGGG
10._RUQ_1715
AATTGGAAGGAAGGGGGGCCTTTTGGGG
11._MITC-000114
AATTGGAAGGAAGGGGGGCCTTTTGGGG
12._SIC_1_Fld#_51_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
13._GC-01-41-2-18
AATTGGAAGGAAGGGGGGCCTT__GGGG
14._GC-01-48-3-3
AATTGGAAGGAAGGGGGG__TTTTGGGG
15._SIC_2_Fld#_120_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
16._GC-08-90-2-13
AATTGGAAGGAAGGGGGGCCTTTTGGGG
17._RUQ_436
AATTGGAAGGAAGGGGGGCCTTTTGGGG
18._RUQ_44
AATTGGAAGGAAGGGGGGCCTTTTGGGG
19._MITC-000366
AATTGGAAGGAAGGGGGGCCTTTTGGGG
20._MITC-000412
AATTGGAAGGAAGGGGGGCCTTTTGGGG
21._MITC-000717
AATTGGAAGGAAGGGGGGCCTTTTGGGG
22._AMELONADO_[VAR]_Fld#_14_Plt#_5
AATTGGAAGGAAGGGGGGCCTTTTGGGG
23._SIAL_42_Fld#_146_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
24._GC-01-56-3-11
AATTGGAAGGAAGGGGGG__TTTTGGGG
25._GC-01-39-2-16
AATTGGAAGGAAGGGGGGCCTTTTGGGG
26._RUQ_1535
AATTGGAAGGAAGGGGGGCCTTTTGGGG
27._RUQ_553
AATTGGAAGGAAGGGGGGCCTTTTGGGG
28._CC_37_Fld#_69B_Plt#_4
AATTGGAAGGAAGGGGGGCCTTTTGGGG
29._SIC_7_Fld#_68_Plt#_6
AATTGGAAGGAAGGGGGGCCTTTTGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAAAGGGGGGTTGGAACCCCGGAAAACC
1._GC-08-109-3-8
AAAAGGGGGGTTGGAACCCCGGAAAACC
2._GC-08-71-1-93
AAAAGGGGGGTTGGAACCCCGGAAAACC
3._GC-01-52-3-7
AAAAGGGGGGTTGGAACCCCGGAAAACC
4._ROUND_LEAF_Fld#_203_Plt#_1
AAAAGGGGGGTTGGGGCCCCGGAAAACC
5._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAAAGGGGGGTTGGGGCCCCGGAAAACC
6._GC-08-277-8-49
AAAGGGGGGGTTGGAACCCCGGAAAACC
7._GC-08-254-8-22
AAAAGGGGGGTTGGAACCACGGAAAACG
8._GC-06-15-1-15
AAAAGGGGGGTTGGAACCCCGGAAAACC
9._GC-08-63-1-85
AAGGGGGGGGTTGGAGCCCCGGAAAACC
10._RUQ_1715
AAAAGGGGGGTTGGAACCCCGGAAAACC
11._MITC-000114
AAAAGGGGGGTTGGAACCCCGGAAAACC
12._SIC_1_Fld#_51_Plt#_5
AAAAGGGGGGTTGGAACCAAGGAAAACC
13._GC-01-41-2-18
AAAGGGGGGGTTGGAGCCCCGGAAAACG
14._GC-01-48-3-3
AAAGGGGGGGTTGGAGCCCCGGAAAACG
15._SIC_2_Fld#_120_Plt#_6
AAGGGGGGGGTTGGAACCAAGGAAAACC
16._GC-08-90-2-13
AAAAGGGGGGTTGGAACCCCGGAAAACC
17._RUQ_436
AAAAGGGGGGTTGGAACCCCGGAAAACC
18._RUQ_44
AAAAGGGGGGTTGGAACCCCGGAAAACC
19._MITC-000366
AAAAGGGGGGTTGGAACCCCGGAAAACC
20._MITC-000412
AAAAGGGGGGTTGGAACCCCGGAAAACC
21._MITC-000717
AAAAGGGGGGTTGGAACCCCGGAAAACC
22._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAAAGGGGGGTTGGAACCCCGGAAAACC
23._SIAL_42_Fld#_146_Plt#_6
AAAAGGGGGGTTGGAACCCCGGAAAACC
24._GC-01-56-3-11
AAAAGGGGGGTTGGAACCCCGGAAAACC
25._GC-01-39-2-16
AAAAGGGGGGTTGGGGCCCCGGAAAACC
26._RUQ_1535
AAAAGGGGGGTTGGAACCCCGGAAAAGG
27._RUQ_553
AAAAGGGGGGTTGGAACCCCGGAAAAGG
28._CC_37_Fld#_69B_Plt#_4
AAAGGGGGGGTTGGAACCCCGGAAAACC
29._SIC_7_Fld#_68_Plt#_6
AAAGGGGGGGTTGGAACCCCGGAAAACC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
AAGGAAAAGGAACCGGAAAAAAAAAACC
1._GC-08-109-3-8
AAGGAAAAGGAACCGGAAAAAAAAAACC
2._GC-08-71-1-93
AAGGAAAAGGAACCGGAAAAAAAAAACC
3._GC-01-52-3-7
AAGGAAAAGGAACCGGAAAAAAAAAACC
4._ROUND_LEAF_Fld#_203_Plt#_1
AAGGAAAAGGAACCGGAAAAAAAAAACC
5._Round_Leaf_Cacao_Fld#_203_Plt#_2
AAGGAAAAGGAACCGGAAAAAAAAAACC
6._GC-08-277-8-49
AAGGAAAAGGAACCGGAAAAAAAAAACC
7._GC-08-254-8-22
ACGGAAAAGGAACCGGAAAAAAAAAACC
8._GC-06-15-1-15
CCGGAAAAGGAACCGGAAAAAAAAAACC
9._GC-08-63-1-85
AAGGAAAAGGAACCGGAAAAACAAAACC
10._RUQ_1715
AAGGGGAAGGAACCGGAAAAAAAAAACC
11._MITC-000114
AAGGGGAAGGAACCGGAAAAAAAAAACC
12._SIC_1_Fld#_51_Plt#_5
CCGGAAAAGGAACCGGAAAAAAAAAACC
13._GC-01-41-2-18
ACGGAAAAGGAACCGGAAAAACAAAACC
14._GC-01-48-3-3
ACGGAAAAGGAACCGGAAAAACAAAACC
15._SIC_2_Fld#_120_Plt#_6
ACGGAAAAGGAACCGGAAAAAAAAAACC
16._GC-08-90-2-13
AAGGAAAAGGAACCGGAAAAAAAAAACC
17._RUQ_436
AAGGAAAAGGAACCGGAAAAAAAAAACC
18._RUQ_44
AAGGAAAAGGAACCGGAAAAAAAAAACC
19._MITC-000366
AAGGAAAAGGAACCGGAAAAAAAAAACC
20._MITC-000412
AAGGAAAAGGAACCGGAAAAAAAAAACC
21._MITC-000717
AAGGAAAAGGAACCGGAAAAAAAAAACC
22._AMELONADO_[VAR]_Fld#_14_Plt#_5
AAGGAAAAGGAACCGGAAAAAAAAAACC
23._SIAL_42_Fld#_146_Plt#_6
AAGGAAAAGGAACCGGAAAAAAAAAACC
24._GC-01-56-3-11
AAGGAAAAGGAACCGGAAAAAAAAAACC
25._GC-01-39-2-16
ACGGAAAAGGAACCGGAAAAAAAAAACC
26._RUQ_1535
AAGGAAAAGGAACCGGAAAAAAAAAACC
27._RUQ_553
AAGGAAAAGGAACCGGAAAAAAAAAACC
28._CC_37_Fld#_69B_Plt#_4
ACGGAAAAGGAACCGGAAAAACAAAACC
29._SIC_7_Fld#_68_Plt#_6
ACGGAAAAGGAACCGGAAAAACAAAACC
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
1._GC-08-109-3-8
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
2._GC-08-71-1-93
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
3._GC-01-52-3-7
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
4._ROUND_LEAF_Fld#_203_Plt#_1
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
5._Round_Leaf_Cacao_Fld#_203_Plt#_2
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
6._GC-08-277-8-49
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
7._GC-08-254-8-22
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
8._GC-06-15-1-15
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
9._GC-08-63-1-85
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
10._RUQ_1715
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
11._MITC-000114
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
12._SIC_1_Fld#_51_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
13._GC-01-41-2-18
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
14._GC-01-48-3-3
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
15._SIC_2_Fld#_120_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
16._GC-08-90-2-13
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
17._RUQ_436
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
18._RUQ_44
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
19._MITC-000366
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
20._MITC-000412
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
21._MITC-000717
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
22._AMELONADO_[VAR]_Fld#_14_Plt#_5
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
23._SIAL_42_Fld#_146_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
24._GC-01-56-3-11
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
25._GC-01-39-2-16
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
26._RUQ_1535
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
27._RUQ_553
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
28._CC_37_Fld#_69B_Plt#_4
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
29._SIC_7_Fld#_68_Plt#_6
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X

Input profile: POUND_5_/C GC-01-118-6-15

 
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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13