SNP Profiles matching GU 125 /C

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 Key

 1234567891011121314
_Input profile
CCACAACCAAGGGGCCAAGGGGAAGGAA
1._GC-01-78-4-14
CCACAACCAAGGGGCCAAGGGGAAGGAA
2._MITC-000670
CCACGGCCAAGGGGCCAAGGGGAAGGAA
3._GC-01-116-6-13
CCACGGCCAAGGGGCCAAGGGGAAGGAA
4._RUQ_771
CCACAGCCAAGGGGCCAAGGGGAAGGAA
5._RUQ_228
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
6._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
7._GC-08-268-8-40
CCAAAACCAAGGGGCCAAGGGGAAGGAA
8._GC-08-052-1-63
CCAAAACCAAGGGGCCAAGGGGAAGGAA
9._RUQ_815
CCAAAACCAAGGGGCCAAGGGGAAGGAA
10._MITC-000403
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
11._MITC-000047
CCACAGCCAAGGGGCCAAGGGGAAGGAA
12._GU_185_Fld#_200_Plt#_1
CCACAGCCAAGGGGCCAAGGGGAAGGAA
13._GU-156B_Fld#_198_Plt#_2
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
14._GC-03-23-2-12
CCCCAACCAAGGGGCCAAGGGGAAGGAA
15._GC-01-76-4-12
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
16._GC-01-80-4-16
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
17._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
18._GC-08-266-8-38
CCACAGCCAAGGGGCCAAGGGGAAGGAA
19._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
20._RUQ_191
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
21._RUQ_222
CCAAAACCAAGGGGCCAAGGGGAAGGAA
22._RUQ_1431
CCACAGCCAAGGGGCCAAGGGGAAGGAA
23._RUQ_1370
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
24._MITC-000615
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
25._MITC-000578
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
26._MITC-000612
CCACAGCCAAGGGGCCAAGGGGAAGGAA
27._MITC-000581
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
28._GC-03-19-2-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
29._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
30._GC-08-172-4-15
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
31._RUQ_880
CCACAGCCAAGGGGCCAAGGGGAAGGAA
32._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
33._GC-01-138-7-17
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
34._GC-01-100-5-17
CCACAGCCAAGGGGCCAAGGGGAAGGAA
35._GC-04-23-2-5
CCAAAACCAAGGGGCCAAGGGGAAGGAA
36._RUQ_813
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
37._GC-01-75-4-11
CCAAAACCAAGGGGCCAAGGGGAAGGAA
38._RUQ_768
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
39._RUQ_200
CCAAAACCAAGGGGCCAAGGGGAAGGAA
40._RUQ_814
CCACAGCCAAGGGGCCAAGGGGAAGGAA
41._RUQ_1545
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
42._GC-08-170-4-13
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
43._RUQ_1543
CCACGGCCAAGGGGCCAAGGGGAAGGAA
44._RUQ_1069
CCAAAACCAAGGGGCCAAGGGGAAGGAA
45._RUQ_195
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
46._RUQ_1549
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
47._MITC-000597
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
48._MITC-000379
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
49._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
50._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
51._RUQ_1068
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
52._GC-01-95-5-12
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
53._GU_221_H_Fld#_162_Plt#_1
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
54._GC-01-74-4-10
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
 1516171819202122232425262728
_Input profile
AAAAAAAACCGGAAGGAAGGCGGGAAAA
1._GC-01-78-4-14
AAAAAAAA_GGAAGGAAGGCGGGAAAA
2._MITC-000670
AAAAAAAACCGGAAGGAAGGCGGGAAAA
3._GC-01-116-6-13
AAAAAAAA_GGAAGGAAGGCGGGAAAA
4._RUQ_771
AAAAAAAACCGGAAGGAAGGGGGGAAAA
5._RUQ_228
AAAAAAAA_GGAAGGACGGCGGGAAAA
6._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
7._GC-08-268-8-40
AAAAAAAACCGGAAGGAAGGCCGGAAAA
8._GC-08-052-1-63
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
9._RUQ_815
AAAAAAAACCGGAAGGAAGGCCGGAAAA
10._MITC-000403
AAAAAAAACCGGAAGGAAGGGGGGAAAA
11._MITC-000047
AAAAAAAACCGGAAGGACGGGGGGAAAA
12._GU_185_Fld#_200_Plt#_1
AAAAAAAACCGGAAGGACGGGGGGAAAA
13._GU-156B_Fld#_198_Plt#_2
AAAAAAAACCGGAAGGAAGGGGGGAAAA
14._GC-03-23-2-12
AAAAAAAA_GGAAGGAAGGGGGGAAAA
15._GC-01-76-4-12
AAAAAAAG_GGAAGGAAGGCGGGAAAA
16._GC-01-80-4-16
AAAAAAAA_GGAAGGAAGGGGGGAAAA
17._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
18._GC-08-266-8-38
AAAAAAAACCGGAAGGAAGGCGAGAAAA
19._GC-01-72-4-8
AAAAAAAACCGGAAGGAAGGGGGGAAAA
20._RUQ_191
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
21._RUQ_222
AAAAAAAACCGGAAGGAAGGCCAGAAAA
22._RUQ_1431
AAAAAAAACCGGAAGGAAGGCGAGAAAA
23._RUQ_1370
AAAAAAAACCGGAAGGAAGGGGGGAAAA
24._MITC-000615
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
25._MITC-000578
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
26._MITC-000612
AAAAAAAACCGGAAGGAAGGCGAGAAAA
27._MITC-000581
AAAAAAAACCGGAAGGAAGGGGGGAAAA
28._GC-03-19-2-8
AAAAAAAAACGGAAGGAAGGCCGGAAAA
29._GC-01-73-4-9
AAAAAAAG_GGAAGGAAGGCCGGAAAA
30._GC-08-172-4-15
AAAAAAAA_GGAAGGAAGGCCGGAAAA
31._RUQ_880
AAAAAAAACCGGAAGGAAGGCCGGAAAA
32._GC-01-72-4-8
AAAAAAAAACGGAAGGAAGGGGGGAAAA
33._GC-01-138-7-17
AAAAAAAA_GGAAGGAAGGGGGGAAAA
34._GC-01-100-5-17
AAAAAAAA_GGAAGGAAGGCCGGAAAA
35._GC-04-23-2-5
AAAAAAGGACGGAAGGAAGGCCGGAAAA
36._RUQ_813
AAAAAAAGCCGGAAGGAAGGGGGGAAAA
37._GC-01-75-4-11
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
38._RUQ_768
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
39._RUQ_200
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
40._RUQ_814
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
41._RUQ_1545
AAAAAAAACCGGAAGGAAGGGGGGAAAA
42._GC-08-170-4-13
AAAAAAAGACGGAAGGAAGGGGGGAAAA
43._RUQ_1543
AAAAAAAG_GGAAGGAAGGCGGGAAAA
44._RUQ_1069
AAAAAAGG_GGAAGGAAGGCCGGAAAA
45._RUQ_195
AAAAAAAACCGGAAGGAAGGCCAAAAAA
46._RUQ_1549
AAAAAAAACCGGAAGGAAGGCCGGAAAA
47._MITC-000597
AAAAAAAACCGGAAGGAAGGCCGGAAAA
48._MITC-000379
AAAAAAAACCGGAAGGAAGGCCGGAAAA
49._GC-01-94-5-11
AAAAAAAACCGGAAGGAAGGCCAAAAAA
50._GC-01-94-5-11
AAAAAAAA_GGAAGGAAGGCCAAAAAA
51._RUQ_1068
AAAAAAAA_GGAAGGAAGGCCGGAAAA
52._GC-01-95-5-12
AAAAAAAACCGGAAGGAAGGCCGGAAAA
53._GU_221_H_Fld#_162_Plt#_1
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
54._GC-01-74-4-10
AAAAAAAG_GGAAGGAAGGCCAGAAAA
 2930313233343536373839404142
_Input profile
GGTTGGAAGGGGGGGGGGCCTTATGGGG
1._GC-01-78-4-14
GGTTGGAAGGGGGGGGGGCCTTATGGGG
2._MITC-000670
GGTTGGAAGGGGGGGGGGCCTTATGGGG
3._GC-01-116-6-13
GGTTGGAAGGGGGGGGGG_TTATGGGG
4._RUQ_771
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
5._RUQ_228
GGTTGGAAGGGGGGGGGGCCTTATGGGG
6._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
7._GC-08-268-8-40
GGTTGGAAGGGGGGGGGGCCTTATGGGG
8._GC-08-052-1-63
GGTTGGAAGGGGGGGGGGCCTTATGGGG
9._RUQ_815
GGTTGGAAGGGGGGGGGGCCTTATGGGG
10._MITC-000403
GGTTGGAAGGGGGGGGGGCCTTATGGGG
11._MITC-000047
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
12._GU_185_Fld#_200_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
13._GU-156B_Fld#_198_Plt#_2
GGTTGGAAGGGGGGGGGGCCTTATGGGG
14._GC-03-23-2-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
15._GC-01-76-4-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
16._GC-01-80-4-16
GGTTGGAAGGGGGGGGGG_TTATGGGG
17._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
18._GC-08-266-8-38
GGTTGGAAGGGGGGGGGGCCTTATAGGG
19._GC-01-72-4-8
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
20._RUQ_191
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
21._RUQ_222
GGTTGGAAGGGGGGGGGGCCTTATGGGG
22._RUQ_1431
GGTTGGAAGGGGGGGGGGCCTTATAGGG
23._RUQ_1370
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
24._MITC-000615
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
25._MITC-000578
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
26._MITC-000612
GGTTGGAAGGGGGGGGGGCCTTATAGGG
27._MITC-000581
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
28._GC-03-19-2-8
GGTTGGAAGGGGGGGGGG_TTATGGGG
29._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
30._GC-08-172-4-15
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
31._RUQ_880
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
32._GC-01-72-4-8
GGTTGGAAGGGGGGGGGG_TTAAGGGG
33._GC-01-138-7-17
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
34._GC-01-100-5-17
GGTTGGAAGGGGGGGGGG_TTTTGGGG
35._GC-04-23-2-5
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
36._RUQ_813
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
37._GC-01-75-4-11
GGTTGGAAGGGGGGGGGGCCTTATGGGG
38._RUQ_768
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
39._RUQ_200
GGTTGGAAGGGGGGGGGGCCTTATGGGG
40._RUQ_814
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
41._RUQ_1545
GGTTGGAAGGGGGGGGGGCCTTATGGGG
42._GC-08-170-4-13
GGTTGGAAGGGGGGGGGG_TTAAGGGG
43._RUQ_1543
GGTTGGAAGGGGGGGGGGCCTTATAGGG
44._RUQ_1069
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
45._RUQ_195
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
46._RUQ_1549
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
47._MITC-000597
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
48._MITC-000379
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
49._GC-01-94-5-11
GGTTGGAAGGGGGGGGGG_TTTTGGGG
50._GC-01-94-5-11
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
51._RUQ_1068
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
52._GC-01-95-5-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
53._GU_221_H_Fld#_162_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
54._GC-01-74-4-10
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
 4344454647484950515253545556
_Input profile
AAAGGGGGGGTTGGAACCAAGGCCGGCC
1._GC-01-78-4-14
AAAGGGGGGGTTGGAACCAAGGCCGGCC
2._MITC-000670
AAAAGGGGGGTTGGAACCAAGGCCGGCC
3._GC-01-116-6-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
4._RUQ_771
AAAAGGGGGGTTGGAACCAAGGCCGGCC
5._RUQ_228
AAAGGGGGGGTTGGAACCAAGGCCGGCC
6._GC-01-73-4-9
AAAAGGGGGGTTGGAACCAAGGCCGGCC
7._GC-08-268-8-40
AAAAGGGGGGTTGGAACCAAGGCCGGCC
8._GC-08-052-1-63
AAAAGGGGGGTTGGAACCAAGGCCGGCC
9._RUQ_815
AAAAGGGGGGTTGGAACCAAGGCCGGCC
10._MITC-000403
AAAGGGGGGGTTGGAACCAAGGCCGGCC
11._MITC-000047
AAAGGGGGGGTTGGAACCAAGGCCGGCC
12._GU_185_Fld#_200_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
13._GU-156B_Fld#_198_Plt#_2
AAAGGGGGGGTTGGAACCAAGGCCGGCC
14._GC-03-23-2-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
15._GC-01-76-4-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
16._GC-01-80-4-16
AAAGGGGGGGTTGGAACCAAGGCCGGCC
17._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
18._GC-08-266-8-38
AAAAGGGGGGTTGGAACCAAGGCCGGCC
19._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
20._RUQ_191
AAAGGGGGGGTTGGAACCAAGGCCAGCC
21._RUQ_222
AAAAGGGGGGTTGGAACCAAGGCCGGCC
22._RUQ_1431
AAAAGGGGGGTTGGAACCAAGGCCGGCC
23._RUQ_1370
AAAAGGGGGGTTGGAACCAAGGCCGGCC
24._MITC-000615
AAAGGGGGGGTTGGAACCAAGGCCAGCC
25._MITC-000578
AAAGGGGGGGTTGGAACCAAGGCCAGCC
26._MITC-000612
AAAAGGGGGGTTGGAACCAAGGCCGGCC
27._MITC-000581
AAAAGGGGGGTTGGAACCAAGGCCGGCC
28._GC-03-19-2-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
29._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
30._GC-08-172-4-15
AAAAGGGGGGTTGGAACCAAGGCCGGCC
31._RUQ_880
AAAAGGGGGGTTGGAACCAAGGCCAGCC
32._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
33._GC-01-138-7-17
AAAAGGGGGGTTGGAACCAAGGCCGGCC
34._GC-01-100-5-17
AAAAGGGGGGTTGGAACCAAGGCCAGCC
35._GC-04-23-2-5
AAAAGGGGGGTTGGAACCAAGGCCGGCC
36._RUQ_813
AAAAGGGGGGTTGGAACCAAGGCCGGCC
37._GC-01-75-4-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
38._RUQ_768
AAAAGGGGGGTTGGAACCAAGGCCGGCC
39._RUQ_200
AAAAGGGGGGTTGGAACCAAGGCCGGCC
40._RUQ_814
AAAGGGGGGGTTGGAACCAAGGCCAGCC
41._RUQ_1545
AAAAGGGGGGTTGGAACCAAGGCCAGCC
42._GC-08-170-4-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
43._RUQ_1543
AAAGGGGGGGTTGGAACCAAGGCCGGCC
44._RUQ_1069
AAAAGGGGGGTTGGAACCAAGGCCGGCC
45._RUQ_195
AAAAGGGGGGTTGGAACCAAGGCCGGCC
46._RUQ_1549
AAGGGGGGGGTTGGAACCAAGGCCAACC
47._MITC-000597
AAGGGGGGGGTTGGAACCAAGGCCAGCC
48._MITC-000379
AAGGGGGGGGTTGGAACCAAGGCCAACC
49._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
50._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
51._RUQ_1068
AAGGGGGGGGTTGGAACCAAGGCCAGCC
52._GC-01-95-5-12
AAGGGGGGGGTTGGAACCAAGGCCAGCC
53._GU_221_H_Fld#_162_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
54._GC-01-74-4-10
AAAGGGGGGGTTGGAACCAAGGCCGGCC
 5758596061626364656667686970
_Input profile
ACGGGGGGGGAACCAAAACCAAAAAACC
1._GC-01-78-4-14
ACGGGGGGGGAACCAAAACCAAAAAACC
2._MITC-000670
ACGGGGGGGGAACCAAAACCAAAAAACC
3._GC-01-116-6-13
ACGGGGGGGGAACCAAAACCAAAAAACC
4._RUQ_771
ACGGGGGGAAAACCAAAACCAAAAAACC
5._RUQ_228
AAGGGGGGAAAACCAAAACCAAAAAACC
6._GC-01-73-4-9
ACGGGGGGGGAACCAAAACCAAAAAACC
7._GC-08-268-8-40
CCGGGGGGGGAACCAAAAAAAAAAAACC
8._GC-08-052-1-63
CCGGGGGGAGAACCAAAAACAAAAAACC
9._RUQ_815
CCGGGGGGGGAACCAAAAAAAAAAAACC
10._MITC-000403
CCGGGGGGAAAACCAAAACCAAAAAACC
11._MITC-000047
ACGGGGAGAAAACCAAAACCAAAAAACC
12._GU_185_Fld#_200_Plt#_1
ACGGGGAGAAAACCAAAACCAAAAAACC
13._GU-156B_Fld#_198_Plt#_2
CCGGGGGGAAAACCAAAACCAAAAAACC
14._GC-03-23-2-12
CCGGGGGGAGAACCAAAACCAAAAAACC
15._GC-01-76-4-12
ACGGGGGGGGAACCAAAACCAAAAAACC
16._GC-01-80-4-16
AAGGGGAGGGAACCAAAACCAAAAAACC
17._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
18._GC-08-266-8-38
ACGGGGGGAGAACCAAAAACAAAAAACC
19._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
20._RUQ_191
CCGGGGGGGGAACCAAAACCAAAAAACC
21._RUQ_222
CCGGGGGGAGAACCAAAAACAAAAAACC
22._RUQ_1431
ACGGGGGGAGAACCAAAAACAAAAAACC
23._RUQ_1370
ACGGGGGGAGAACCAAAACCAAAAAACC
24._MITC-000615
CCGGGGGGGGAACCAAAACCAAAAAACC
25._MITC-000578
CCGGGGGGGGAACCAAAACCAAAAAACC
26._MITC-000612
ACGGGGGGAGAACCAAAAACAAAAAACC
27._MITC-000581
ACGGGGGGAGAACCAAAACCAAAAAACC
28._GC-03-19-2-8
CCGGGGGGGGAACCAAAACCAAAAAACC
29._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
30._GC-08-172-4-15
CCGGGGGGGGAACCAAAACCAAAAAACC
31._RUQ_880
CCGGGGGGAAAACCAAAACCAAAAAACC
32._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
33._GC-01-138-7-17
CCGGGGGGAAAACCAAAACCAAAAAACC
34._GC-01-100-5-17
CCGGGGGGAAAACCAAAACCAAAAAACC
35._GC-04-23-2-5
ACGGGGGGAGAACCAAAAACAAAAAACC
36._RUQ_813
CCGGGGAGAGAACCAAAACCAAAAAACC
37._GC-01-75-4-11
ACGGGGGGAGAACCAAAAAAAAAAAACC
38._RUQ_768
CCGGGGAGAGAACCAAAACCAAAAAACC
39._RUQ_200
ACGGGGGGAGAACCAAAAAAAAAAAACC
40._RUQ_814
AAGGGGGGGGAACCAAAAACAAAAAACC
41._RUQ_1545
CCGGGGAGAAAACCAAAACCAAAAAACC
42._GC-08-170-4-13
CCGGGGAGAGAACCAAAACCAAAAAACC
43._RUQ_1543
AAGGGGAGAAAACCAAAAACAAAAAACC
44._RUQ_1069
AAGGGGGGAAAACCAAAAACAAAAAACC
45._RUQ_195
CCGGGGGGGGAACCAAAAACAAAAAACC
46._RUQ_1549
CCGGGGAAAAAACCAAAACCAAAAAACC
47._MITC-000597
CCGGGGAAAAAACCAAAACCAAAAAACC
48._MITC-000379
CCGGGGAAAAAACCAAAACCAAAAAACC
49._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
50._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
51._RUQ_1068
CCGGGGAAAAAACCAAAACCAAAAAACC
52._GC-01-95-5-12
CCGGGGAAAAAACCAAAACCAAAAAACC
53._GU_221_H_Fld#_162_Plt#_1
CCGGGGGGAGAACCAAAAAAAAAAAACC
54._GC-01-74-4-10
CCGGGGGGAGAACCAAAAAAAAAAAACC
 717273747576777879808182  
_Input profile
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
1._GC-01-78-4-14
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
2._MITC-000670
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
3._GC-01-116-6-13
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
4._RUQ_771
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
5._RUQ_228
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
6._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
7._GC-08-268-8-40
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
8._GC-08-052-1-63
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
9._RUQ_815
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
10._MITC-000403
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
11._MITC-000047
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
12._GU_185_Fld#_200_Plt#_1
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
13._GU-156B_Fld#_198_Plt#_2
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
14._GC-03-23-2-12
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
15._GC-01-76-4-12
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
16._GC-01-80-4-16
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
17._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
18._GC-08-266-8-38
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
19._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
20._RUQ_191
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
21._RUQ_222
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
22._RUQ_1431
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
23._RUQ_1370
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
24._MITC-000615
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
25._MITC-000578
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
26._MITC-000612
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
27._MITC-000581
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
28._GC-03-19-2-8
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
29._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
30._GC-08-172-4-15
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
31._RUQ_880
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
32._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
33._GC-01-138-7-17
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
34._GC-01-100-5-17
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
35._GC-04-23-2-5
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
36._RUQ_813
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
37._GC-01-75-4-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
38._RUQ_768
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
39._RUQ_200
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
40._RUQ_814
GGCCGGGGGGCCGGGGGGAAAAGGX_XX_X
41._RUQ_1545
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
42._GC-08-170-4-13
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
43._RUQ_1543
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
44._RUQ_1069
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
45._RUQ_195
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
46._RUQ_1549
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
47._MITC-000597
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
48._MITC-000379
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
49._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
50._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
51._RUQ_1068
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
52._GC-01-95-5-12
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
53._GU_221_H_Fld#_162_Plt#_1
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
54._GC-01-74-4-10
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X

Input profile: GU_125_/C RUQ_188

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

1._GU_154_/C GC-01-78-4-14

identical
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._GU_133_/C MITC-000670

97.6 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

3._GU_133_/C GC-01-116-6-13

97.5 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 13, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

4._GU_277_/G RUQ_771

96.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

5._GU_249_/H RUQ_228

96.3 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

6._GU_144_/C GC-01-73-4-9

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

7._GU_310 GC-08-268-8-40

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

8._GU_335 GC-08-052-1-63

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 63, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

9._GU_310_/P RUQ_815

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

10._GU_156_B MITC-000403

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

11._GU_185_/G MITC-000047

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

12._GU_185 GU_185_Fld#_200_Plt#_1

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 200, Tree: 1
 Mars, 2018

13._GU_156_B GU-156B_Fld#_198_Plt#_2

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 198, Tree: 2
 Mars, 2018

14._GU_168_/H GC-03-23-2-12

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

15._GU_296_/H GC-01-76-4-12

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

16._GU_147_/H GC-01-80-4-16

95.6 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 16, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._GU_144_/C GC-01-73-4-9

95.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

18._GU_241 GC-08-266-8-38

95.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._GU_261 GC-01-72-4-8

95.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

20._GU_144_/C RUQ_191

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

21._GU_147_/H RUQ_222

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._GU_241_/P RUQ_1431

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

23._GU_261_/P RUQ_1370

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

24._GU_144_/C MITC-000615

95.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

25._GU_144_/C MITC-000578

95.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

26._GU_241_/P MITC-000612

95.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

27._GU_261 MITC-000581

95.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

28._GU_136_/H GC-03-19-2-8

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 8, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

29._GU_144_/C GC-01-73-4-9

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

30._GU_151 GC-08-172-4-15

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 1, Rep: 15, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

31._CRU_156 RUQ_880

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

32._GU_261 GC-01-72-4-8

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

33._GU_125_/C GC-01-138-7-17

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 7, Rep: 17, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

34._GU_175 GC-01-100-5-17

94.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

35._GU_353 GC-04-23-2-5

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 2, Rep: 5, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

36._GU_114_/P RUQ_813

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

37._GU_221_/C GC-01-75-4-11

93.3 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

38._GU_219_/F RUQ_768

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

39._GU_221_/C RUQ_200

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

40._GU_243_/H RUQ_814

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

41._GU_263_/V RUQ_1545

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

42._GU_114 GC-08-170-4-13

93.2 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

43._GU_183_/G RUQ_1543

93.2 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

44._GU_195_/V RUQ_1069

93.2 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

45._GU_171_/C RUQ_195

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

46._GU_255_/V RUQ_1549

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

47._GU_123_/V MITC-000597

92.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

48._GU_255_/P MITC-000379

92.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

49._GU_171_/C GC-01-94-5-11

92 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_171_/C GC-01-94-5-11

92 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

51._GU_123_/V RUQ_1068

92 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

52._GU_123_/C GC-01-95-5-12

91.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

53._GU_221_/H GU_221_H_Fld#_162_Plt#_1

91.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

54._GU_221_/H GC-01-74-4-10

91.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998