SNP Profiles matching CRU 156

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
CCACAGCCAAGGGGCCAAGGGGAAGGAA
1._GC-01-100-5-17
CCACAGCCAAGGGGCCAAGGGGAAGGAA
2._MITC-000403
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
3._GU-156B_Fld#_198_Plt#_2
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
4._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
5._GC-01-95-5-12
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
6._RUQ_191
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
7._RUQ_771
CCACAGCCAAGGGGCCAAGGGGAAGGAA
8._MITC-000615
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
9._MITC-000578
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
10._GC-03-19-2-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
11._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
12._GC-08-268-8-40
CCAAAACCAAGGGGCCAAGGGGAAGGAA
13._RUQ_768
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
14._RUQ_1545
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
15._RUQ_815
CCAAAACCAAGGGGCCAAGGGGAAGGAA
16._MITC-000597
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
17._GC-01-138-7-17
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
18._GC-03-23-2-12
CCCCAACCAAGGGGCCAAGGGGAAGGAA
19._RUQ_1068
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
20._GC-08-266-8-38
CCACAGCCAAGGGGCCAAGGGGAAGGAA
21._RUQ_188
CCACAACCAAGGGGCCAAGGGGAAGGAA
22._RUQ_222
CCAAAACCAAGGGGCCAAGGGGAAGGAA
23._RUQ_1431
CCACAGCCAAGGGGCCAAGGGGAAGGAA
24._MITC-000670
CCACGGCCAAGGGGCCAAGGGGAAGGAA
25._MITC-000612
CCACAGCCAAGGGGCCAAGGGGAAGGAA
26._GC-08-172-4-15
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
27._GC-01-78-4-14
CCACAACCAAGGGGCCAAGGGGAAGGAA
28._RUQ_228
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
29._GC-01-116-6-13
CCACGGCCAAGGGGCCAAGGGGAAGGAA
30._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
31._GC-08-052-1-63
CCAAAACCAAGGGGCCAAGGGGAAGGAA
32._RUQ_195
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
33._RUQ_1549
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
34._MITC-000047
CCACAGCCAAGGGGCCAAGGGGAAGGAA
35._MITC-000379
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
36._GU_185_Fld#_200_Plt#_1
CCACAGCCAAGGGGCCAAGGGGAAGGAA
37._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
38._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
39._GC-01-76-4-12
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
40._RUQ_1069
CCAAAACCAAGGGGCCAAGGGGAAGGAA
41._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
42._GC-04-23-2-5
CCAAAACCAAGGGGCCAAGGGGAAGGAA
43._RUQ_813
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
44._RUQ_1370
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
45._MITC-000581
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
46._GC-01-75-4-11
CCAAAACCAAGGGGCCAAGGGGAAGGAA
47._RUQ_200
CCAAAACCAAGGGGCCAAGGGGAAGGAA
48._RUQ_814
CCACAGCCAAGGGGCCAAGGGGAAGGAA
49._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
50._GC-08-170-4-13
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
51._GU_221_H_Fld#_162_Plt#_1
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
52._GC-01-74-4-10
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
53._RUQ_1543
CCACGGCCAAGGGGCCAAGGGGAAGGAA
54._RUQ_406
CCAAAACCAAGGGGCCAAGGGGAAGGAA
55._GC-01-80-4-16
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
 1516171819202122232425262728
_Input profile
AAAAAAAACCGGAAGGAAGGCCGGAAAA
1._GC-01-100-5-17
AAAAAAAA_GGAAGGAAGGCCGGAAAA
2._MITC-000403
AAAAAAAACCGGAAGGAAGGGGGGAAAA
3._GU-156B_Fld#_198_Plt#_2
AAAAAAAACCGGAAGGAAGGGGGGAAAA
4._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
5._GC-01-95-5-12
AAAAAAAACCGGAAGGAAGGCCGGAAAA
6._RUQ_191
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
7._RUQ_771
AAAAAAAACCGGAAGGAAGGGGGGAAAA
8._MITC-000615
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
9._MITC-000578
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
10._GC-03-19-2-8
AAAAAAAAACGGAAGGAAGGCCGGAAAA
11._GC-01-73-4-9
AAAAAAAG_GGAAGGAAGGCCGGAAAA
12._GC-08-268-8-40
AAAAAAAACCGGAAGGAAGGCCGGAAAA
13._RUQ_768
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
14._RUQ_1545
AAAAAAAACCGGAAGGAAGGGGGGAAAA
15._RUQ_815
AAAAAAAACCGGAAGGAAGGCCGGAAAA
16._MITC-000597
AAAAAAAACCGGAAGGAAGGCCGGAAAA
17._GC-01-138-7-17
AAAAAAAA_GGAAGGAAGGGGGGAAAA
18._GC-03-23-2-12
AAAAAAAA_GGAAGGAAGGGGGGAAAA
19._RUQ_1068
AAAAAAAA_GGAAGGAAGGCCGGAAAA
20._GC-08-266-8-38
AAAAAAAACCGGAAGGAAGGCGAGAAAA
21._RUQ_188
AAAAAAAACCGGAAGGAAGGCGGGAAAA
22._RUQ_222
AAAAAAAACCGGAAGGAAGGCCAGAAAA
23._RUQ_1431
AAAAAAAACCGGAAGGAAGGCGAGAAAA
24._MITC-000670
AAAAAAAACCGGAAGGAAGGCGGGAAAA
25._MITC-000612
AAAAAAAACCGGAAGGAAGGCGAGAAAA
26._GC-08-172-4-15
AAAAAAAA_GGAAGGAAGGCCGGAAAA
27._GC-01-78-4-14
AAAAAAAA_GGAAGGAAGGCGGGAAAA
28._RUQ_228
AAAAAAAA_GGAAGGACGGCGGGAAAA
29._GC-01-116-6-13
AAAAAAAA_GGAAGGAAGGCGGGAAAA
30._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
31._GC-08-052-1-63
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
32._RUQ_195
AAAAAAAACCGGAAGGAAGGCCAAAAAA
33._RUQ_1549
AAAAAAAACCGGAAGGAAGGCCGGAAAA
34._MITC-000047
AAAAAAAACCGGAAGGACGGGGGGAAAA
35._MITC-000379
AAAAAAAACCGGAAGGAAGGCCGGAAAA
36._GU_185_Fld#_200_Plt#_1
AAAAAAAACCGGAAGGACGGGGGGAAAA
37._GC-01-94-5-11
AAAAAAAACCGGAAGGAAGGCCAAAAAA
38._GC-01-94-5-11
AAAAAAAA_GGAAGGAAGGCCAAAAAA
39._GC-01-76-4-12
AAAAAAAG_GGAAGGAAGGCGGGAAAA
40._RUQ_1069
AAAAAAGG_GGAAGGAAGGCCGGAAAA
41._GC-01-72-4-8
AAAAAAAACCGGAAGGAAGGGGGGAAAA
42._GC-04-23-2-5
AAAAAAGGACGGAAGGAAGGCCGGAAAA
43._RUQ_813
AAAAAAAGCCGGAAGGAAGGGGGGAAAA
44._RUQ_1370
AAAAAAAACCGGAAGGAAGGGGGGAAAA
45._MITC-000581
AAAAAAAACCGGAAGGAAGGGGGGAAAA
46._GC-01-75-4-11
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
47._RUQ_200
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
48._RUQ_814
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
49._GC-01-72-4-8
AAAAAAAAACGGAAGGAAGGGGGGAAAA
50._GC-08-170-4-13
AAAAAAAGACGGAAGGAAGGGGGGAAAA
51._GU_221_H_Fld#_162_Plt#_1
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
52._GC-01-74-4-10
AAAAAAAG_GGAAGGAAGGCCAGAAAA
53._RUQ_1543
AAAAAAAG_GGAAGGAAGGCGGGAAAA
54._RUQ_406
AAAAAAGG_GGAAGGCCGGCCGGAAAA
55._GC-01-80-4-16
AAAAAAAA_GGAAGGAAGGGGGGAAAA
 2930313233343536373839404142
_Input profile
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
1._GC-01-100-5-17
GGTTGGAAGGGGGGGGGG_TTTTGGGG
2._MITC-000403
GGTTGGAAGGGGGGGGGGCCTTATGGGG
3._GU-156B_Fld#_198_Plt#_2
GGTTGGAAGGGGGGGGGGCCTTATGGGG
4._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
5._GC-01-95-5-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
6._RUQ_191
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
7._RUQ_771
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
8._MITC-000615
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
9._MITC-000578
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
10._GC-03-19-2-8
GGTTGGAAGGGGGGGGGG_TTATGGGG
11._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
12._GC-08-268-8-40
GGTTGGAAGGGGGGGGGGCCTTATGGGG
13._RUQ_768
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
14._RUQ_1545
GGTTGGAAGGGGGGGGGGCCTTATGGGG
15._RUQ_815
GGTTGGAAGGGGGGGGGGCCTTATGGGG
16._MITC-000597
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
17._GC-01-138-7-17
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
18._GC-03-23-2-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
19._RUQ_1068
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
20._GC-08-266-8-38
GGTTGGAAGGGGGGGGGGCCTTATAGGG
21._RUQ_188
GGTTGGAAGGGGGGGGGGCCTTATGGGG
22._RUQ_222
GGTTGGAAGGGGGGGGGGCCTTATGGGG
23._RUQ_1431
GGTTGGAAGGGGGGGGGGCCTTATAGGG
24._MITC-000670
GGTTGGAAGGGGGGGGGGCCTTATGGGG
25._MITC-000612
GGTTGGAAGGGGGGGGGGCCTTATAGGG
26._GC-08-172-4-15
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
27._GC-01-78-4-14
GGTTGGAAGGGGGGGGGGCCTTATGGGG
28._RUQ_228
GGTTGGAAGGGGGGGGGGCCTTATGGGG
29._GC-01-116-6-13
GGTTGGAAGGGGGGGGGG_TTATGGGG
30._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
31._GC-08-052-1-63
GGTTGGAAGGGGGGGGGGCCTTATGGGG
32._RUQ_195
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
33._RUQ_1549
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
34._MITC-000047
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
35._MITC-000379
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
36._GU_185_Fld#_200_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
37._GC-01-94-5-11
GGTTGGAAGGGGGGGGGG_TTTTGGGG
38._GC-01-94-5-11
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
39._GC-01-76-4-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
40._RUQ_1069
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
41._GC-01-72-4-8
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
42._GC-04-23-2-5
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
43._RUQ_813
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
44._RUQ_1370
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
45._MITC-000581
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
46._GC-01-75-4-11
GGTTGGAAGGGGGGGGGGCCTTATGGGG
47._RUQ_200
GGTTGGAAGGGGGGGGGGCCTTATGGGG
48._RUQ_814
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
49._GC-01-72-4-8
GGTTGGAAGGGGGGGGGG_TTAAGGGG
50._GC-08-170-4-13
GGTTGGAAGGGGGGGGGG_TTAAGGGG
51._GU_221_H_Fld#_162_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
52._GC-01-74-4-10
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
53._RUQ_1543
GGTTGGAAGGGGGGGGGGCCTTATAGGG
54._RUQ_406
GGTTGGAAGGGGGGGGGGCCTTTTAAGG
55._GC-01-80-4-16
GGTTGGAAGGGGGGGGGG_TTATGGGG
 4344454647484950515253545556
_Input profile
AAAAGGGGGGTTGGAACCAAGGCCAGCC
1._GC-01-100-5-17
AAAAGGGGGGTTGGAACCAAGGCCAGCC
2._MITC-000403
AAAGGGGGGGTTGGAACCAAGGCCGGCC
3._GU-156B_Fld#_198_Plt#_2
AAAGGGGGGGTTGGAACCAAGGCCGGCC
4._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
5._GC-01-95-5-12
AAGGGGGGGGTTGGAACCAAGGCCAGCC
6._RUQ_191
AAAGGGGGGGTTGGAACCAAGGCCAGCC
7._RUQ_771
AAAAGGGGGGTTGGAACCAAGGCCGGCC
8._MITC-000615
AAAGGGGGGGTTGGAACCAAGGCCAGCC
9._MITC-000578
AAAGGGGGGGTTGGAACCAAGGCCAGCC
10._GC-03-19-2-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
11._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
12._GC-08-268-8-40
AAAAGGGGGGTTGGAACCAAGGCCGGCC
13._RUQ_768
AAAAGGGGGGTTGGAACCAAGGCCGGCC
14._RUQ_1545
AAAAGGGGGGTTGGAACCAAGGCCAGCC
15._RUQ_815
AAAAGGGGGGTTGGAACCAAGGCCGGCC
16._MITC-000597
AAGGGGGGGGTTGGAACCAAGGCCAGCC
17._GC-01-138-7-17
AAAAGGGGGGTTGGAACCAAGGCCGGCC
18._GC-03-23-2-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
19._RUQ_1068
AAGGGGGGGGTTGGAACCAAGGCCAGCC
20._GC-08-266-8-38
AAAAGGGGGGTTGGAACCAAGGCCGGCC
21._RUQ_188
AAAGGGGGGGTTGGAACCAAGGCCGGCC
22._RUQ_222
AAAAGGGGGGTTGGAACCAAGGCCGGCC
23._RUQ_1431
AAAAGGGGGGTTGGAACCAAGGCCGGCC
24._MITC-000670
AAAAGGGGGGTTGGAACCAAGGCCGGCC
25._MITC-000612
AAAAGGGGGGTTGGAACCAAGGCCGGCC
26._GC-08-172-4-15
AAAAGGGGGGTTGGAACCAAGGCCGGCC
27._GC-01-78-4-14
AAAGGGGGGGTTGGAACCAAGGCCGGCC
28._RUQ_228
AAAGGGGGGGTTGGAACCAAGGCCGGCC
29._GC-01-116-6-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
30._GC-01-73-4-9
AAAAGGGGGGTTGGAACCAAGGCCGGCC
31._GC-08-052-1-63
AAAAGGGGGGTTGGAACCAAGGCCGGCC
32._RUQ_195
AAAAGGGGGGTTGGAACCAAGGCCGGCC
33._RUQ_1549
AAGGGGGGGGTTGGAACCAAGGCCAACC
34._MITC-000047
AAAGGGGGGGTTGGAACCAAGGCCGGCC
35._MITC-000379
AAGGGGGGGGTTGGAACCAAGGCCAACC
36._GU_185_Fld#_200_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
37._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
38._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
39._GC-01-76-4-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
40._RUQ_1069
AAAAGGGGGGTTGGAACCAAGGCCGGCC
41._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
42._GC-04-23-2-5
AAAAGGGGGGTTGGAACCAAGGCCGGCC
43._RUQ_813
AAAAGGGGGGTTGGAACCAAGGCCGGCC
44._RUQ_1370
AAAAGGGGGGTTGGAACCAAGGCCGGCC
45._MITC-000581
AAAAGGGGGGTTGGAACCAAGGCCGGCC
46._GC-01-75-4-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
47._RUQ_200
AAAAGGGGGGTTGGAACCAAGGCCGGCC
48._RUQ_814
AAAGGGGGGGTTGGAACCAAGGCCAGCC
49._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
50._GC-08-170-4-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
51._GU_221_H_Fld#_162_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
52._GC-01-74-4-10
AAAGGGGGGGTTGGAACCAAGGCCGGCC
53._RUQ_1543
AAAGGGGGGGTTGGAACCAAGGCCGGCC
54._RUQ_406
AAAAGGGGGGAAGGAACCAAGGCCAGCC
55._GC-01-80-4-16
AAAGGGGGGGTTGGAACCAAGGCCGGCC
 5758596061626364656667686970
_Input profile
CCGGGGGGAAAACCAAAACCAAAAAACC
1._GC-01-100-5-17
CCGGGGGGAAAACCAAAACCAAAAAACC
2._MITC-000403
CCGGGGGGAAAACCAAAACCAAAAAACC
3._GU-156B_Fld#_198_Plt#_2
CCGGGGGGAAAACCAAAACCAAAAAACC
4._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
5._GC-01-95-5-12
CCGGGGAAAAAACCAAAACCAAAAAACC
6._RUQ_191
CCGGGGGGGGAACCAAAACCAAAAAACC
7._RUQ_771
ACGGGGGGAAAACCAAAACCAAAAAACC
8._MITC-000615
CCGGGGGGGGAACCAAAACCAAAAAACC
9._MITC-000578
CCGGGGGGGGAACCAAAACCAAAAAACC
10._GC-03-19-2-8
CCGGGGGGGGAACCAAAACCAAAAAACC
11._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
12._GC-08-268-8-40
CCGGGGGGGGAACCAAAAAAAAAAAACC
13._RUQ_768
CCGGGGAGAGAACCAAAACCAAAAAACC
14._RUQ_1545
CCGGGGAGAAAACCAAAACCAAAAAACC
15._RUQ_815
CCGGGGGGGGAACCAAAAAAAAAAAACC
16._MITC-000597
CCGGGGAAAAAACCAAAACCAAAAAACC
17._GC-01-138-7-17
CCGGGGGGAAAACCAAAACCAAAAAACC
18._GC-03-23-2-12
CCGGGGGGAGAACCAAAACCAAAAAACC
19._RUQ_1068
CCGGGGAAAAAACCAAAACCAAAAAACC
20._GC-08-266-8-38
ACGGGGGGAGAACCAAAAACAAAAAACC
21._RUQ_188
ACGGGGGGGGAACCAAAACCAAAAAACC
22._RUQ_222
CCGGGGGGAGAACCAAAAACAAAAAACC
23._RUQ_1431
ACGGGGGGAGAACCAAAAACAAAAAACC
24._MITC-000670
ACGGGGGGGGAACCAAAACCAAAAAACC
25._MITC-000612
ACGGGGGGAGAACCAAAAACAAAAAACC
26._GC-08-172-4-15
CCGGGGGGGGAACCAAAACCAAAAAACC
27._GC-01-78-4-14
ACGGGGGGGGAACCAAAACCAAAAAACC
28._RUQ_228
AAGGGGGGAAAACCAAAACCAAAAAACC
29._GC-01-116-6-13
ACGGGGGGGGAACCAAAACCAAAAAACC
30._GC-01-73-4-9
ACGGGGGGGGAACCAAAACCAAAAAACC
31._GC-08-052-1-63
CCGGGGGGAGAACCAAAAACAAAAAACC
32._RUQ_195
CCGGGGGGGGAACCAAAAACAAAAAACC
33._RUQ_1549
CCGGGGAAAAAACCAAAACCAAAAAACC
34._MITC-000047
ACGGGGAGAAAACCAAAACCAAAAAACC
35._MITC-000379
CCGGGGAAAAAACCAAAACCAAAAAACC
36._GU_185_Fld#_200_Plt#_1
ACGGGGAGAAAACCAAAACCAAAAAACC
37._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
38._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
39._GC-01-76-4-12
ACGGGGGGGGAACCAAAACCAAAAAACC
40._RUQ_1069
AAGGGGGGAAAACCAAAAACAAAAAACC
41._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
42._GC-04-23-2-5
ACGGGGGGAGAACCAAAAACAAAAAACC
43._RUQ_813
CCGGGGAGAGAACCAAAACCAAAAAACC
44._RUQ_1370
ACGGGGGGAGAACCAAAACCAAAAAACC
45._MITC-000581
ACGGGGGGAGAACCAAAACCAAAAAACC
46._GC-01-75-4-11
ACGGGGGGAGAACCAAAAAAAAAAAACC
47._RUQ_200
ACGGGGGGAGAACCAAAAAAAAAAAACC
48._RUQ_814
AAGGGGGGGGAACCAAAAACAAAAAACC
49._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
50._GC-08-170-4-13
CCGGGGAGAGAACCAAAACCAAAAAACC
51._GU_221_H_Fld#_162_Plt#_1
CCGGGGGGAGAACCAAAAAAAAAAAACC
52._GC-01-74-4-10
CCGGGGGGAGAACCAAAAAAAAAAAACC
53._RUQ_1543
AAGGGGAGAAAACCAAAAACAAAAAACC
54._RUQ_406
CCGGGGGGGGAACCAAAAAAAAAAAACC
55._GC-01-80-4-16
AAGGGGAGGGAACCAAAACCAAAAAACC
 717273747576777879808182  
_Input profile
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
1._GC-01-100-5-17
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
2._MITC-000403
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
3._GU-156B_Fld#_198_Plt#_2
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
4._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
5._GC-01-95-5-12
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
6._RUQ_191
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
7._RUQ_771
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
8._MITC-000615
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
9._MITC-000578
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
10._GC-03-19-2-8
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
11._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
12._GC-08-268-8-40
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
13._RUQ_768
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
14._RUQ_1545
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
15._RUQ_815
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
16._MITC-000597
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
17._GC-01-138-7-17
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
18._GC-03-23-2-12
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
19._RUQ_1068
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
20._GC-08-266-8-38
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
21._RUQ_188
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
22._RUQ_222
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
23._RUQ_1431
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
24._MITC-000670
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
25._MITC-000612
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
26._GC-08-172-4-15
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
27._GC-01-78-4-14
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
28._RUQ_228
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
29._GC-01-116-6-13
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
30._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
31._GC-08-052-1-63
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
32._RUQ_195
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
33._RUQ_1549
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
34._MITC-000047
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
35._MITC-000379
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
36._GU_185_Fld#_200_Plt#_1
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
37._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
38._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
39._GC-01-76-4-12
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
40._RUQ_1069
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
41._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
42._GC-04-23-2-5
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
43._RUQ_813
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
44._RUQ_1370
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
45._MITC-000581
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
46._GC-01-75-4-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
47._RUQ_200
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
48._RUQ_814
GGCCGGGGGGCCGGGGGGAAAAGGX_XX_X
49._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
50._GC-08-170-4-13
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
51._GU_221_H_Fld#_162_Plt#_1
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
52._GC-01-74-4-10
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
53._RUQ_1543
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
54._RUQ_406
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
55._GC-01-80-4-16
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X

Input profile: CRU_156 RUQ_880

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

1._GU_175 GC-01-100-5-17

identical
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._GU_156_B MITC-000403

96.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

3._GU_156_B GU-156B_Fld#_198_Plt#_2

96.3 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 198, Tree: 2
 Mars, 2018

4._GU_144_/C GC-01-73-4-9

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

5._GU_123_/C GC-01-95-5-12

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

6._GU_144_/C RUQ_191

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

7._GU_277_/G RUQ_771

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

8._GU_144_/C MITC-000615

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

9._GU_144_/C MITC-000578

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

10._GU_136_/H GC-03-19-2-8

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 8, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

11._GU_144_/C GC-01-73-4-9

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

12._GU_310 GC-08-268-8-40

95.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

13._GU_219_/F RUQ_768

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

14._GU_263_/V RUQ_1545

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

15._GU_310_/P RUQ_815

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

16._GU_123_/V MITC-000597

95.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

17._GU_125_/C GC-01-138-7-17

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 7, Rep: 17, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._GU_168_/H GC-03-23-2-12

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._GU_123_/V RUQ_1068

95.1 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

20._GU_241 GC-08-266-8-38

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

21._GU_125_/C RUQ_188

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._GU_147_/H RUQ_222

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

23._GU_241_/P RUQ_1431

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

24._GU_133_/C MITC-000670

94.5 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

25._GU_241_/P MITC-000612

94.5 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

26._GU_151 GC-08-172-4-15

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 1, Rep: 15, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

27._GU_154_/C GC-01-78-4-14

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

28._GU_249_/H RUQ_228

94.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

29._GU_133_/C GC-01-116-6-13

94.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 13, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

30._GU_144_/C GC-01-73-4-9

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

31._GU_335 GC-08-052-1-63

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 63, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

32._GU_171_/C RUQ_195

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

33._GU_255_/V RUQ_1549

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._GU_185_/G MITC-000047

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

35._GU_255_/P MITC-000379

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

36._GU_185 GU_185_Fld#_200_Plt#_1

93.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 200, Tree: 1
 Mars, 2018

37._GU_171_/C GC-01-94-5-11

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

38._GU_171_/C GC-01-94-5-11

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

39._GU_296_/H GC-01-76-4-12

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

40._GU_195_/V RUQ_1069

93.8 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

41._GU_261 GC-01-72-4-8

93.3 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

42._GU_353 GC-04-23-2-5

93.3 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 2, Rep: 5, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

43._GU_114_/P RUQ_813

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

44._GU_261_/P RUQ_1370

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

45._GU_261 MITC-000581

93.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

46._GU_221_/C GC-01-75-4-11

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

47._GU_221_/C RUQ_200

92.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

48._GU_243_/H RUQ_814

92.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

49._GU_261 GC-01-72-4-8

92.6 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_114 GC-08-170-4-13

92.6 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

51._GU_221_/H GU_221_H_Fld#_162_Plt#_1

92.1 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

52._GU_221_/H GC-01-74-4-10

92 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

53._GU_183_/G RUQ_1543

91.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

54._KER_3 RUQ_406

91.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

55._GU_147_/H GC-01-80-4-16

91.3 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 16, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998