SNP Profiles matching GU 261

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 Key

 1234567891011121314
_Input profile
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
1._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
2._RUQ_1370
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
3._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
4._GC-01-138-7-17
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
5._RUQ_813
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
6._RUQ_771
CCACAGCCAAGGGGCCAAGGGGAAGGAA
7._MITC-000670
CCACGGCCAAGGGGCCAAGGGGAAGGAA
8._GC-08-172-4-15
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
9._GC-01-116-6-13
CCACGGCCAAGGGGCCAAGGGGAAGGAA
10._RUQ_1545
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
11._GC-08-170-4-13
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
12._GC-01-80-4-16
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
13._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
14._MITC-000403
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
15._MITC-000047
CCACAGCCAAGGGGCCAAGGGGAAGGAA
16._GU_185_Fld#_200_Plt#_1
CCACAGCCAAGGGGCCAAGGGGAAGGAA
17._GU-156B_Fld#_198_Plt#_2
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
18._GC-03-23-2-12
CCCCAACCAAGGGGCCAAGGGGAAGGAA
19._GC-01-76-4-12
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
20._RUQ_188
CCACAACCAAGGGGCCAAGGGGAAGGAA
21._GC-03-19-2-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
22._GC-01-78-4-14
CCACAACCAAGGGGCCAAGGGGAAGGAA
23._RUQ_228
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
24._GC-08-052-1-63
CCAAAACCAAGGGGCCAAGGGGAAGGAA
25._RUQ_768
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
26._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
27._GC-08-266-8-38
CCACAGCCAAGGGGCCAAGGGGAAGGAA
28._RUQ_191
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
29._RUQ_222
CCAAAACCAAGGGGCCAAGGGGAAGGAA
30._RUQ_1431
CCACAGCCAAGGGGCCAAGGGGAAGGAA
31._MITC-000615
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
32._MITC-000578
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
33._MITC-000612
CCACAGCCAAGGGGCCAAGGGGAAGGAA
34._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
35._GC-08-268-8-40
CCAAAACCAAGGGGCCAAGGGGAAGGAA
36._RUQ_880
CCACAGCCAAGGGGCCAAGGGGAAGGAA
37._RUQ_1549
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
38._RUQ_815
CCAAAACCAAGGGGCCAAGGGGAAGGAA
39._MITC-000379
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
40._RUQ_1543
CCACGGCCAAGGGGCCAAGGGGAAGGAA
41._RUQ_1069
CCAAAACCAAGGGGCCAAGGGGAAGGAA
42._GC-01-100-5-17
CCACAGCCAAGGGGCCAAGGGGAAGGAA
43._GC-04-23-2-5
CCAAAACCAAGGGGCCAAGGGGAAGGAA
44._GC-01-75-4-11
CCAAAACCAAGGGGCCAAGGGGAAGGAA
45._RUQ_200
CCAAAACCAAGGGGCCAAGGGGAAGGAA
46._MITC-000597
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
47._RUQ_1068
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
48._GC-01-95-5-12
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
49._GU_221_H_Fld#_162_Plt#_1
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
50._GC-01-74-4-10
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
51._RUQ_195
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
52._RUQ_814
CCACAGCCAAGGGGCCAAGGGGAAGGAA
53._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
54._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
 1516171819202122232425262728
_Input profile
AAAAAAAACCGGAAGGAAGGGGGGAAAA
1._GC-01-72-4-8
AAAAAAAACCGGAAGGAAGGGGGGAAAA
2._RUQ_1370
AAAAAAAACCGGAAGGAAGGGGGGAAAA
3._GC-01-72-4-8
AAAAAAAAACGGAAGGAAGGGGGGAAAA
4._GC-01-138-7-17
AAAAAAAA__GGAAGGAAGGGGGGAAAA
5._RUQ_813
AAAAAAAGCCGGAAGGAAGGGGGGAAAA
6._RUQ_771
AAAAAAAACCGGAAGGAAGGGGGGAAAA
7._MITC-000670
AAAAAAAACCGGAAGGAAGGCGGGAAAA
8._GC-08-172-4-15
AAAAAAAA__GGAAGGAAGGCCGGAAAA
9._GC-01-116-6-13
AAAAAAAA__GGAAGGAAGGCGGGAAAA
10._RUQ_1545
AAAAAAAACCGGAAGGAAGGGGGGAAAA
11._GC-08-170-4-13
AAAAAAAGACGGAAGGAAGGGGGGAAAA
12._GC-01-80-4-16
AAAAAAAA__GGAAGGAAGGGGGGAAAA
13._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
14._MITC-000403
AAAAAAAACCGGAAGGAAGGGGGGAAAA
15._MITC-000047
AAAAAAAACCGGAAGGACGGGGGGAAAA
16._GU_185_Fld#_200_Plt#_1
AAAAAAAACCGGAAGGACGGGGGGAAAA
17._GU-156B_Fld#_198_Plt#_2
AAAAAAAACCGGAAGGAAGGGGGGAAAA
18._GC-03-23-2-12
AAAAAAAA__GGAAGGAAGGGGGGAAAA
19._GC-01-76-4-12
AAAAAAAG__GGAAGGAAGGCGGGAAAA
20._RUQ_188
AAAAAAAACCGGAAGGAAGGCGGGAAAA
21._GC-03-19-2-8
AAAAAAAAACGGAAGGAAGGCCGGAAAA
22._GC-01-78-4-14
AAAAAAAA__GGAAGGAAGGCGGGAAAA
23._RUQ_228
AAAAAAAA__GGAAGGACGGCGGGAAAA
24._GC-08-052-1-63
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
25._RUQ_768
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
26._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
27._GC-08-266-8-38
AAAAAAAACCGGAAGGAAGGCGAGAAAA
28._RUQ_191
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
29._RUQ_222
AAAAAAAACCGGAAGGAAGGCCAGAAAA
30._RUQ_1431
AAAAAAAACCGGAAGGAAGGCGAGAAAA
31._MITC-000615
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
32._MITC-000578
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
33._MITC-000612
AAAAAAAACCGGAAGGAAGGCGAGAAAA
34._GC-01-73-4-9
AAAAAAAG__GGAAGGAAGGCCGGAAAA
35._GC-08-268-8-40
AAAAAAAACCGGAAGGAAGGCCGGAAAA
36._RUQ_880
AAAAAAAACCGGAAGGAAGGCCGGAAAA
37._RUQ_1549
AAAAAAAACCGGAAGGAAGGCCGGAAAA
38._RUQ_815
AAAAAAAACCGGAAGGAAGGCCGGAAAA
39._MITC-000379
AAAAAAAACCGGAAGGAAGGCCGGAAAA
40._RUQ_1543
AAAAAAAG__GGAAGGAAGGCGGGAAAA
41._RUQ_1069
AAAAAAGG__GGAAGGAAGGCCGGAAAA
42._GC-01-100-5-17
AAAAAAAA__GGAAGGAAGGCCGGAAAA
43._GC-04-23-2-5
AAAAAAGGACGGAAGGAAGGCCGGAAAA
44._GC-01-75-4-11
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
45._RUQ_200
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
46._MITC-000597
AAAAAAAACCGGAAGGAAGGCCGGAAAA
47._RUQ_1068
AAAAAAAA__GGAAGGAAGGCCGGAAAA
48._GC-01-95-5-12
AAAAAAAACCGGAAGGAAGGCCGGAAAA
49._GU_221_H_Fld#_162_Plt#_1
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
50._GC-01-74-4-10
AAAAAAAG__GGAAGGAAGGCCAGAAAA
51._RUQ_195
AAAAAAAACCGGAAGGAAGGCCAAAAAA
52._RUQ_814
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
53._GC-01-94-5-11
AAAAAAAACCGGAAGGAAGGCCAAAAAA
54._GC-01-94-5-11
AAAAAAAA__GGAAGGAAGGCCAAAAAA
 2930313233343536373839404142
_Input profile
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
1._GC-01-72-4-8
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
2._RUQ_1370
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
3._GC-01-72-4-8
GGTTGGAAGGGGGGGGGG__TTAAGGGG
4._GC-01-138-7-17
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
5._RUQ_813
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
6._RUQ_771
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
7._MITC-000670
GGTTGGAAGGGGGGGGGGCCTTATGGGG
8._GC-08-172-4-15
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
9._GC-01-116-6-13
GGTTGGAAGGGGGGGGGG__TTATGGGG
10._RUQ_1545
GGTTGGAAGGGGGGGGGGCCTTATGGGG
11._GC-08-170-4-13
GGTTGGAAGGGGGGGGGG__TTAAGGGG
12._GC-01-80-4-16
GGTTGGAAGGGGGGGGGG__TTATGGGG
13._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
14._MITC-000403
GGTTGGAAGGGGGGGGGGCCTTATGGGG
15._MITC-000047
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
16._GU_185_Fld#_200_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
17._GU-156B_Fld#_198_Plt#_2
GGTTGGAAGGGGGGGGGGCCTTATGGGG
18._GC-03-23-2-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
19._GC-01-76-4-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
20._RUQ_188
GGTTGGAAGGGGGGGGGGCCTTATGGGG
21._GC-03-19-2-8
GGTTGGAAGGGGGGGGGG__TTATGGGG
22._GC-01-78-4-14
GGTTGGAAGGGGGGGGGGCCTTATGGGG
23._RUQ_228
GGTTGGAAGGGGGGGGGGCCTTATGGGG
24._GC-08-052-1-63
GGTTGGAAGGGGGGGGGGCCTTATGGGG
25._RUQ_768
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
26._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
27._GC-08-266-8-38
GGTTGGAAGGGGGGGGGGCCTTATAGGG
28._RUQ_191
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
29._RUQ_222
GGTTGGAAGGGGGGGGGGCCTTATGGGG
30._RUQ_1431
GGTTGGAAGGGGGGGGGGCCTTATAGGG
31._MITC-000615
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
32._MITC-000578
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
33._MITC-000612
GGTTGGAAGGGGGGGGGGCCTTATAGGG
34._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
35._GC-08-268-8-40
GGTTGGAAGGGGGGGGGGCCTTATGGGG
36._RUQ_880
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
37._RUQ_1549
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
38._RUQ_815
GGTTGGAAGGGGGGGGGGCCTTATGGGG
39._MITC-000379
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
40._RUQ_1543
GGTTGGAAGGGGGGGGGGCCTTATAGGG
41._RUQ_1069
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
42._GC-01-100-5-17
GGTTGGAAGGGGGGGGGG__TTTTGGGG
43._GC-04-23-2-5
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
44._GC-01-75-4-11
GGTTGGAAGGGGGGGGGGCCTTATGGGG
45._RUQ_200
GGTTGGAAGGGGGGGGGGCCTTATGGGG
46._MITC-000597
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
47._RUQ_1068
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
48._GC-01-95-5-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
49._GU_221_H_Fld#_162_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
50._GC-01-74-4-10
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
51._RUQ_195
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
52._RUQ_814
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
53._GC-01-94-5-11
GGTTGGAAGGGGGGGGGG__TTTTGGGG
54._GC-01-94-5-11
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
 4344454647484950515253545556
_Input profile
AAAAGGGGGGTTGGAACCAAGGCCGGCC
1._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
2._RUQ_1370
AAAAGGGGGGTTGGAACCAAGGCCGGCC
3._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
4._GC-01-138-7-17
AAAAGGGGGGTTGGAACCAAGGCCGGCC
5._RUQ_813
AAAAGGGGGGTTGGAACCAAGGCCGGCC
6._RUQ_771
AAAAGGGGGGTTGGAACCAAGGCCGGCC
7._MITC-000670
AAAAGGGGGGTTGGAACCAAGGCCGGCC
8._GC-08-172-4-15
AAAAGGGGGGTTGGAACCAAGGCCGGCC
9._GC-01-116-6-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
10._RUQ_1545
AAAAGGGGGGTTGGAACCAAGGCCAGCC
11._GC-08-170-4-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
12._GC-01-80-4-16
AAAGGGGGGGTTGGAACCAAGGCCGGCC
13._GC-01-73-4-9
AAAAGGGGGGTTGGAACCAAGGCCGGCC
14._MITC-000403
AAAGGGGGGGTTGGAACCAAGGCCGGCC
15._MITC-000047
AAAGGGGGGGTTGGAACCAAGGCCGGCC
16._GU_185_Fld#_200_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
17._GU-156B_Fld#_198_Plt#_2
AAAGGGGGGGTTGGAACCAAGGCCGGCC
18._GC-03-23-2-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
19._GC-01-76-4-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
20._RUQ_188
AAAGGGGGGGTTGGAACCAAGGCCGGCC
21._GC-03-19-2-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
22._GC-01-78-4-14
AAAGGGGGGGTTGGAACCAAGGCCGGCC
23._RUQ_228
AAAGGGGGGGTTGGAACCAAGGCCGGCC
24._GC-08-052-1-63
AAAAGGGGGGTTGGAACCAAGGCCGGCC
25._RUQ_768
AAAAGGGGGGTTGGAACCAAGGCCGGCC
26._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
27._GC-08-266-8-38
AAAAGGGGGGTTGGAACCAAGGCCGGCC
28._RUQ_191
AAAGGGGGGGTTGGAACCAAGGCCAGCC
29._RUQ_222
AAAAGGGGGGTTGGAACCAAGGCCGGCC
30._RUQ_1431
AAAAGGGGGGTTGGAACCAAGGCCGGCC
31._MITC-000615
AAAGGGGGGGTTGGAACCAAGGCCAGCC
32._MITC-000578
AAAGGGGGGGTTGGAACCAAGGCCAGCC
33._MITC-000612
AAAAGGGGGGTTGGAACCAAGGCCGGCC
34._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
35._GC-08-268-8-40
AAAAGGGGGGTTGGAACCAAGGCCGGCC
36._RUQ_880
AAAAGGGGGGTTGGAACCAAGGCCAGCC
37._RUQ_1549
AAGGGGGGGGTTGGAACCAAGGCCAACC
38._RUQ_815
AAAAGGGGGGTTGGAACCAAGGCCGGCC
39._MITC-000379
AAGGGGGGGGTTGGAACCAAGGCCAACC
40._RUQ_1543
AAAGGGGGGGTTGGAACCAAGGCCGGCC
41._RUQ_1069
AAAAGGGGGGTTGGAACCAAGGCCGGCC
42._GC-01-100-5-17
AAAAGGGGGGTTGGAACCAAGGCCAGCC
43._GC-04-23-2-5
AAAAGGGGGGTTGGAACCAAGGCCGGCC
44._GC-01-75-4-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
45._RUQ_200
AAAAGGGGGGTTGGAACCAAGGCCGGCC
46._MITC-000597
AAGGGGGGGGTTGGAACCAAGGCCAGCC
47._RUQ_1068
AAGGGGGGGGTTGGAACCAAGGCCAGCC
48._GC-01-95-5-12
AAGGGGGGGGTTGGAACCAAGGCCAGCC
49._GU_221_H_Fld#_162_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
50._GC-01-74-4-10
AAAGGGGGGGTTGGAACCAAGGCCGGCC
51._RUQ_195
AAAAGGGGGGTTGGAACCAAGGCCGGCC
52._RUQ_814
AAAGGGGGGGTTGGAACCAAGGCCAGCC
53._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
54._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
 5758596061626364656667686970
_Input profile
ACGGGGGGAGAACCAAAACCAAAAAACC
1._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
2._RUQ_1370
ACGGGGGGAGAACCAAAACCAAAAAACC
3._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
4._GC-01-138-7-17
CCGGGGGGAAAACCAAAACCAAAAAACC
5._RUQ_813
CCGGGGAGAGAACCAAAACCAAAAAACC
6._RUQ_771
ACGGGGGGAAAACCAAAACCAAAAAACC
7._MITC-000670
ACGGGGGGGGAACCAAAACCAAAAAACC
8._GC-08-172-4-15
CCGGGGGGGGAACCAAAACCAAAAAACC
9._GC-01-116-6-13
ACGGGGGGGGAACCAAAACCAAAAAACC
10._RUQ_1545
CCGGGGAGAAAACCAAAACCAAAAAACC
11._GC-08-170-4-13
CCGGGGAGAGAACCAAAACCAAAAAACC
12._GC-01-80-4-16
AAGGGGAGGGAACCAAAACCAAAAAACC
13._GC-01-73-4-9
ACGGGGGGGGAACCAAAACCAAAAAACC
14._MITC-000403
CCGGGGGGAAAACCAAAACCAAAAAACC
15._MITC-000047
ACGGGGAGAAAACCAAAACCAAAAAACC
16._GU_185_Fld#_200_Plt#_1
ACGGGGAGAAAACCAAAACCAAAAAACC
17._GU-156B_Fld#_198_Plt#_2
CCGGGGGGAAAACCAAAACCAAAAAACC
18._GC-03-23-2-12
CCGGGGGGAGAACCAAAACCAAAAAACC
19._GC-01-76-4-12
ACGGGGGGGGAACCAAAACCAAAAAACC
20._RUQ_188
ACGGGGGGGGAACCAAAACCAAAAAACC
21._GC-03-19-2-8
CCGGGGGGGGAACCAAAACCAAAAAACC
22._GC-01-78-4-14
ACGGGGGGGGAACCAAAACCAAAAAACC
23._RUQ_228
AAGGGGGGAAAACCAAAACCAAAAAACC
24._GC-08-052-1-63
CCGGGGGGAGAACCAAAAACAAAAAACC
25._RUQ_768
CCGGGGAGAGAACCAAAACCAAAAAACC
26._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
27._GC-08-266-8-38
ACGGGGGGAGAACCAAAAACAAAAAACC
28._RUQ_191
CCGGGGGGGGAACCAAAACCAAAAAACC
29._RUQ_222
CCGGGGGGAGAACCAAAAACAAAAAACC
30._RUQ_1431
ACGGGGGGAGAACCAAAAACAAAAAACC
31._MITC-000615
CCGGGGGGGGAACCAAAACCAAAAAACC
32._MITC-000578
CCGGGGGGGGAACCAAAACCAAAAAACC
33._MITC-000612
ACGGGGGGAGAACCAAAAACAAAAAACC
34._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
35._GC-08-268-8-40
CCGGGGGGGGAACCAAAAAAAAAAAACC
36._RUQ_880
CCGGGGGGAAAACCAAAACCAAAAAACC
37._RUQ_1549
CCGGGGAAAAAACCAAAACCAAAAAACC
38._RUQ_815
CCGGGGGGGGAACCAAAAAAAAAAAACC
39._MITC-000379
CCGGGGAAAAAACCAAAACCAAAAAACC
40._RUQ_1543
AAGGGGAGAAAACCAAAAACAAAAAACC
41._RUQ_1069
AAGGGGGGAAAACCAAAAACAAAAAACC
42._GC-01-100-5-17
CCGGGGGGAAAACCAAAACCAAAAAACC
43._GC-04-23-2-5
ACGGGGGGAGAACCAAAAACAAAAAACC
44._GC-01-75-4-11
ACGGGGGGAGAACCAAAAAAAAAAAACC
45._RUQ_200
ACGGGGGGAGAACCAAAAAAAAAAAACC
46._MITC-000597
CCGGGGAAAAAACCAAAACCAAAAAACC
47._RUQ_1068
CCGGGGAAAAAACCAAAACCAAAAAACC
48._GC-01-95-5-12
CCGGGGAAAAAACCAAAACCAAAAAACC
49._GU_221_H_Fld#_162_Plt#_1
CCGGGGGGAGAACCAAAAAAAAAAAACC
50._GC-01-74-4-10
CCGGGGGGAGAACCAAAAAAAAAAAACC
51._RUQ_195
CCGGGGGGGGAACCAAAAACAAAAAACC
52._RUQ_814
AAGGGGGGGGAACCAAAAACAAAAAACC
53._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
54._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
 717273747576777879808182  
_Input profile
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
1._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
2._RUQ_1370
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
3._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
4._GC-01-138-7-17
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
5._RUQ_813
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
6._RUQ_771
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
7._MITC-000670
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
8._GC-08-172-4-15
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
9._GC-01-116-6-13
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
10._RUQ_1545
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
11._GC-08-170-4-13
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
12._GC-01-80-4-16
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
13._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
14._MITC-000403
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
15._MITC-000047
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
16._GU_185_Fld#_200_Plt#_1
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
17._GU-156B_Fld#_198_Plt#_2
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
18._GC-03-23-2-12
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
19._GC-01-76-4-12
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
20._RUQ_188
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
21._GC-03-19-2-8
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
22._GC-01-78-4-14
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
23._RUQ_228
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
24._GC-08-052-1-63
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
25._RUQ_768
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
26._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
27._GC-08-266-8-38
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
28._RUQ_191
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
29._RUQ_222
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
30._RUQ_1431
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
31._MITC-000615
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
32._MITC-000578
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
33._MITC-000612
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
34._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
35._GC-08-268-8-40
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
36._RUQ_880
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
37._RUQ_1549
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
38._RUQ_815
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
39._MITC-000379
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
40._RUQ_1543
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
41._RUQ_1069
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
42._GC-01-100-5-17
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
43._GC-04-23-2-5
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
44._GC-01-75-4-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
45._RUQ_200
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
46._MITC-000597
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
47._RUQ_1068
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
48._GC-01-95-5-12
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
49._GU_221_H_Fld#_162_Plt#_1
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
50._GC-01-74-4-10
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
51._RUQ_195
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
52._RUQ_814
GGCCGGGGGGCCGGGGGGAAAAGGX_XX_X
53._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
54._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X

Input profile: GU_261 MITC-000581

 
USDA-SHRS, United States of America
 Mars, 2018

1._GU_261 GC-01-72-4-8

identical
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._GU_261_/P RUQ_1370

identical
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._GU_261 GC-01-72-4-8

99.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

4._GU_125_/C GC-01-138-7-17

98.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 7, Rep: 17, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

5._GU_114_/P RUQ_813

97.6 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

6._GU_277_/G RUQ_771

97.6 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

7._GU_133_/C MITC-000670

97.6 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

8._GU_151 GC-08-172-4-15

97.5 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 1, Rep: 15, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

9._GU_133_/C GC-01-116-6-13

97.5 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 13, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

10._GU_263_/V RUQ_1545

97 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

11._GU_114 GC-08-170-4-13

96.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

12._GU_147_/H GC-01-80-4-16

96.9 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 16, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

13._GU_144_/C GC-01-73-4-9

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

14._GU_156_B MITC-000403

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

15._GU_185_/G MITC-000047

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

16._GU_185 GU_185_Fld#_200_Plt#_1

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 200, Tree: 1
 Mars, 2018

17._GU_156_B GU-156B_Fld#_198_Plt#_2

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 198, Tree: 2
 Mars, 2018

18._GU_168_/H GC-03-23-2-12

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._GU_296_/H GC-01-76-4-12

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

20._GU_125_/C RUQ_188

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

21._GU_136_/H GC-03-19-2-8

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 8, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

22._GU_154_/C GC-01-78-4-14

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

23._GU_249_/H RUQ_228

95.1 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

24._GU_335 GC-08-052-1-63

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 63, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

25._GU_219_/F RUQ_768

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

26._GU_144_/C GC-01-73-4-9

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

27._GU_241 GC-08-266-8-38

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

28._GU_144_/C RUQ_191

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

29._GU_147_/H RUQ_222

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

30._GU_241_/P RUQ_1431

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

31._GU_144_/C MITC-000615

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

32._GU_144_/C MITC-000578

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

33._GU_241_/P MITC-000612

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

34._GU_144_/C GC-01-73-4-9

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

35._GU_310 GC-08-268-8-40

93.3 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

36._CRU_156 RUQ_880

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

37._GU_255_/V RUQ_1549

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

38._GU_310_/P RUQ_815

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

39._GU_255_/P MITC-000379

93.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

40._GU_183_/G RUQ_1543

93.2 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

41._GU_195_/V RUQ_1069

93.2 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

42._GU_175 GC-01-100-5-17

93.1 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

43._GU_353 GC-04-23-2-5

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 2, Rep: 5, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

44._GU_221_/C GC-01-75-4-11

92.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

45._GU_221_/C RUQ_200

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

46._GU_123_/V MITC-000597

92.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

47._GU_123_/V RUQ_1068

92 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

48._GU_123_/C GC-01-95-5-12

91.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

49._GU_221_/H GU_221_H_Fld#_162_Plt#_1

91.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

50._GU_221_/H GC-01-74-4-10

91.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

51._GU_171_/C RUQ_195

90.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

52._GU_243_/H RUQ_814

90.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

53._GU_171_/C GC-01-94-5-11

90.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

54._GU_171_/C GC-01-94-5-11

90.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998