SNP Profiles matching GU 123 /V

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 Key

 1234567891011121314
_Input profile
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
1._RUQ_1068
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
2._GC-01-95-5-12
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
3._RUQ_1549
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
4._MITC-000379
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
5._RUQ_880
CCACAGCCAAGGGGCCAAGGGGAAGGAA
6._RUQ_1545
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
7._GC-01-100-5-17
CCACAGCCAAGGGGCCAAGGGGAAGGAA
8._RUQ_768
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
9._MITC-000403
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
10._GU-156B_Fld#_198_Plt#_2
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
11._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
12._RUQ_813
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
13._RUQ_191
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
14._RUQ_222
CCAAAACCAAGGGGCCAAGGGGAAGGAA
15._MITC-000615
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
16._MITC-000578
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
17._GC-03-19-2-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
18._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
19._GC-08-172-4-15
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
20._RUQ_228
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
21._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
22._GC-08-052-1-63
CCAAAACCAAGGGGCCAAGGGGAAGGAA
23._MITC-000047
CCACAGCCAAGGGGCCAAGGGGAAGGAA
24._GU_185_Fld#_200_Plt#_1
CCACAGCCAAGGGGCCAAGGGGAAGGAA
25._GC-08-170-4-13
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
26._GC-01-138-7-17
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
27._GC-01-76-4-12
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
28._RUQ_1543
CCACGGCCAAGGGGCCAAGGGGAAGGAA
29._GC-01-80-4-16
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
30._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
31._GC-04-23-2-5
CCAAAACCAAGGGGCCAAGGGGAAGGAA
32._RUQ_188
CCACAACCAAGGGGCCAAGGGGAAGGAA
33._RUQ_1370
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
34._RUQ_771
CCACAGCCAAGGGGCCAAGGGGAAGGAA
35._MITC-000670
CCACGGCCAAGGGGCCAAGGGGAAGGAA
36._MITC-000581
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
37._GC-01-78-4-14
CCACAACCAAGGGGCCAAGGGGAAGGAA
38._GC-01-116-6-13
CCACGGCCAAGGGGCCAAGGGGAAGGAA
39._GC-08-268-8-40
CCAAAACCAAGGGGCCAAGGGGAAGGAA
40._RUQ_195
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
41._RUQ_814
CCACAGCCAAGGGGCCAAGGGGAAGGAA
42._RUQ_815
CCAAAACCAAGGGGCCAAGGGGAAGGAA
43._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
44._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
45._GC-03-23-2-12
CCCCAACCAAGGGGCCAAGGGGAAGGAA
46._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
47._GC-08-266-8-38
CCACAGCCAAGGGGCCAAGGGGAAGGAA
48._RUQ_1431
CCACAGCCAAGGGGCCAAGGGGAAGGAA
49._MITC-000612
CCACAGCCAAGGGGCCAAGGGGAAGGAA
50._GU_221_H_Fld#_162_Plt#_1
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
51._GC-01-74-4-10
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
52._GC-01-75-4-11
CCAAAACCAAGGGGCCAAGGGGAAGGAA
53._RUQ_200
CCAAAACCAAGGGGCCAAGGGGAAGGAA
54._RUQ_1069
CCAAAACCAAGGGGCCAAGGGGAAGGAA
 1516171819202122232425262728
_Input profile
AAAAAAAACCGGAAGGAAGGCCGGAAAA
1._RUQ_1068
AAAAAAAA_GGAAGGAAGGCCGGAAAA
2._GC-01-95-5-12
AAAAAAAACCGGAAGGAAGGCCGGAAAA
3._RUQ_1549
AAAAAAAACCGGAAGGAAGGCCGGAAAA
4._MITC-000379
AAAAAAAACCGGAAGGAAGGCCGGAAAA
5._RUQ_880
AAAAAAAACCGGAAGGAAGGCCGGAAAA
6._RUQ_1545
AAAAAAAACCGGAAGGAAGGGGGGAAAA
7._GC-01-100-5-17
AAAAAAAA_GGAAGGAAGGCCGGAAAA
8._RUQ_768
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
9._MITC-000403
AAAAAAAACCGGAAGGAAGGGGGGAAAA
10._GU-156B_Fld#_198_Plt#_2
AAAAAAAACCGGAAGGAAGGGGGGAAAA
11._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
12._RUQ_813
AAAAAAAGCCGGAAGGAAGGGGGGAAAA
13._RUQ_191
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
14._RUQ_222
AAAAAAAACCGGAAGGAAGGCCAGAAAA
15._MITC-000615
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
16._MITC-000578
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
17._GC-03-19-2-8
AAAAAAAAACGGAAGGAAGGCCGGAAAA
18._GC-01-73-4-9
AAAAAAAG_GGAAGGAAGGCCGGAAAA
19._GC-08-172-4-15
AAAAAAAA_GGAAGGAAGGCCGGAAAA
20._RUQ_228
AAAAAAAA_GGAAGGACGGCGGGAAAA
21._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
22._GC-08-052-1-63
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
23._MITC-000047
AAAAAAAACCGGAAGGACGGGGGGAAAA
24._GU_185_Fld#_200_Plt#_1
AAAAAAAACCGGAAGGACGGGGGGAAAA
25._GC-08-170-4-13
AAAAAAAGACGGAAGGAAGGGGGGAAAA
26._GC-01-138-7-17
AAAAAAAA_GGAAGGAAGGGGGGAAAA
27._GC-01-76-4-12
AAAAAAAG_GGAAGGAAGGCGGGAAAA
28._RUQ_1543
AAAAAAAG_GGAAGGAAGGCGGGAAAA
29._GC-01-80-4-16
AAAAAAAA_GGAAGGAAGGGGGGAAAA
30._GC-01-72-4-8
AAAAAAAACCGGAAGGAAGGGGGGAAAA
31._GC-04-23-2-5
AAAAAAGGACGGAAGGAAGGCCGGAAAA
32._RUQ_188
AAAAAAAACCGGAAGGAAGGCGGGAAAA
33._RUQ_1370
AAAAAAAACCGGAAGGAAGGGGGGAAAA
34._RUQ_771
AAAAAAAACCGGAAGGAAGGGGGGAAAA
35._MITC-000670
AAAAAAAACCGGAAGGAAGGCGGGAAAA
36._MITC-000581
AAAAAAAACCGGAAGGAAGGGGGGAAAA
37._GC-01-78-4-14
AAAAAAAA_GGAAGGAAGGCGGGAAAA
38._GC-01-116-6-13
AAAAAAAA_GGAAGGAAGGCGGGAAAA
39._GC-08-268-8-40
AAAAAAAACCGGAAGGAAGGCCGGAAAA
40._RUQ_195
AAAAAAAACCGGAAGGAAGGCCAAAAAA
41._RUQ_814
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
42._RUQ_815
AAAAAAAACCGGAAGGAAGGCCGGAAAA
43._GC-01-94-5-11
AAAAAAAACCGGAAGGAAGGCCAAAAAA
44._GC-01-72-4-8
AAAAAAAAACGGAAGGAAGGGGGGAAAA
45._GC-03-23-2-12
AAAAAAAA_GGAAGGAAGGGGGGAAAA
46._GC-01-94-5-11
AAAAAAAA_GGAAGGAAGGCCAAAAAA
47._GC-08-266-8-38
AAAAAAAACCGGAAGGAAGGCGAGAAAA
48._RUQ_1431
AAAAAAAACCGGAAGGAAGGCGAGAAAA
49._MITC-000612
AAAAAAAACCGGAAGGAAGGCGAGAAAA
50._GU_221_H_Fld#_162_Plt#_1
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
51._GC-01-74-4-10
AAAAAAAG_GGAAGGAAGGCCAGAAAA
52._GC-01-75-4-11
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
53._RUQ_200
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
54._RUQ_1069
AAAAAAGG_GGAAGGAAGGCCGGAAAA
 2930313233343536373839404142
_Input profile
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
1._RUQ_1068
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
2._GC-01-95-5-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
3._RUQ_1549
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
4._MITC-000379
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
5._RUQ_880
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
6._RUQ_1545
GGTTGGAAGGGGGGGGGGCCTTATGGGG
7._GC-01-100-5-17
GGTTGGAAGGGGGGGGGG_TTTTGGGG
8._RUQ_768
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
9._MITC-000403
GGTTGGAAGGGGGGGGGGCCTTATGGGG
10._GU-156B_Fld#_198_Plt#_2
GGTTGGAAGGGGGGGGGGCCTTATGGGG
11._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
12._RUQ_813
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
13._RUQ_191
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
14._RUQ_222
GGTTGGAAGGGGGGGGGGCCTTATGGGG
15._MITC-000615
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
16._MITC-000578
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
17._GC-03-19-2-8
GGTTGGAAGGGGGGGGGG_TTATGGGG
18._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
19._GC-08-172-4-15
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
20._RUQ_228
GGTTGGAAGGGGGGGGGGCCTTATGGGG
21._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
22._GC-08-052-1-63
GGTTGGAAGGGGGGGGGGCCTTATGGGG
23._MITC-000047
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
24._GU_185_Fld#_200_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
25._GC-08-170-4-13
GGTTGGAAGGGGGGGGGG_TTAAGGGG
26._GC-01-138-7-17
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
27._GC-01-76-4-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
28._RUQ_1543
GGTTGGAAGGGGGGGGGGCCTTATAGGG
29._GC-01-80-4-16
GGTTGGAAGGGGGGGGGG_TTATGGGG
30._GC-01-72-4-8
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
31._GC-04-23-2-5
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
32._RUQ_188
GGTTGGAAGGGGGGGGGGCCTTATGGGG
33._RUQ_1370
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
34._RUQ_771
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
35._MITC-000670
GGTTGGAAGGGGGGGGGGCCTTATGGGG
36._MITC-000581
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
37._GC-01-78-4-14
GGTTGGAAGGGGGGGGGGCCTTATGGGG
38._GC-01-116-6-13
GGTTGGAAGGGGGGGGGG_TTATGGGG
39._GC-08-268-8-40
GGTTGGAAGGGGGGGGGGCCTTATGGGG
40._RUQ_195
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
41._RUQ_814
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
42._RUQ_815
GGTTGGAAGGGGGGGGGGCCTTATGGGG
43._GC-01-94-5-11
GGTTGGAAGGGGGGGGGG_TTTTGGGG
44._GC-01-72-4-8
GGTTGGAAGGGGGGGGGG_TTAAGGGG
45._GC-03-23-2-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
46._GC-01-94-5-11
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
47._GC-08-266-8-38
GGTTGGAAGGGGGGGGGGCCTTATAGGG
48._RUQ_1431
GGTTGGAAGGGGGGGGGGCCTTATAGGG
49._MITC-000612
GGTTGGAAGGGGGGGGGGCCTTATAGGG
50._GU_221_H_Fld#_162_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
51._GC-01-74-4-10
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
52._GC-01-75-4-11
GGTTGGAAGGGGGGGGGGCCTTATGGGG
53._RUQ_200
GGTTGGAAGGGGGGGGGGCCTTATGGGG
54._RUQ_1069
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
 4344454647484950515253545556
_Input profile
AAGGGGGGGGTTGGAACCAAGGCCAGCC
1._RUQ_1068
AAGGGGGGGGTTGGAACCAAGGCCAGCC
2._GC-01-95-5-12
AAGGGGGGGGTTGGAACCAAGGCCAGCC
3._RUQ_1549
AAGGGGGGGGTTGGAACCAAGGCCAACC
4._MITC-000379
AAGGGGGGGGTTGGAACCAAGGCCAACC
5._RUQ_880
AAAAGGGGGGTTGGAACCAAGGCCAGCC
6._RUQ_1545
AAAAGGGGGGTTGGAACCAAGGCCAGCC
7._GC-01-100-5-17
AAAAGGGGGGTTGGAACCAAGGCCAGCC
8._RUQ_768
AAAAGGGGGGTTGGAACCAAGGCCGGCC
9._MITC-000403
AAAGGGGGGGTTGGAACCAAGGCCGGCC
10._GU-156B_Fld#_198_Plt#_2
AAAGGGGGGGTTGGAACCAAGGCCGGCC
11._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
12._RUQ_813
AAAAGGGGGGTTGGAACCAAGGCCGGCC
13._RUQ_191
AAAGGGGGGGTTGGAACCAAGGCCAGCC
14._RUQ_222
AAAAGGGGGGTTGGAACCAAGGCCGGCC
15._MITC-000615
AAAGGGGGGGTTGGAACCAAGGCCAGCC
16._MITC-000578
AAAGGGGGGGTTGGAACCAAGGCCAGCC
17._GC-03-19-2-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
18._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
19._GC-08-172-4-15
AAAAGGGGGGTTGGAACCAAGGCCGGCC
20._RUQ_228
AAAGGGGGGGTTGGAACCAAGGCCGGCC
21._GC-01-73-4-9
AAAAGGGGGGTTGGAACCAAGGCCGGCC
22._GC-08-052-1-63
AAAAGGGGGGTTGGAACCAAGGCCGGCC
23._MITC-000047
AAAGGGGGGGTTGGAACCAAGGCCGGCC
24._GU_185_Fld#_200_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
25._GC-08-170-4-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
26._GC-01-138-7-17
AAAAGGGGGGTTGGAACCAAGGCCGGCC
27._GC-01-76-4-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
28._RUQ_1543
AAAGGGGGGGTTGGAACCAAGGCCGGCC
29._GC-01-80-4-16
AAAGGGGGGGTTGGAACCAAGGCCGGCC
30._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
31._GC-04-23-2-5
AAAAGGGGGGTTGGAACCAAGGCCGGCC
32._RUQ_188
AAAGGGGGGGTTGGAACCAAGGCCGGCC
33._RUQ_1370
AAAAGGGGGGTTGGAACCAAGGCCGGCC
34._RUQ_771
AAAAGGGGGGTTGGAACCAAGGCCGGCC
35._MITC-000670
AAAAGGGGGGTTGGAACCAAGGCCGGCC
36._MITC-000581
AAAAGGGGGGTTGGAACCAAGGCCGGCC
37._GC-01-78-4-14
AAAGGGGGGGTTGGAACCAAGGCCGGCC
38._GC-01-116-6-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
39._GC-08-268-8-40
AAAAGGGGGGTTGGAACCAAGGCCGGCC
40._RUQ_195
AAAAGGGGGGTTGGAACCAAGGCCGGCC
41._RUQ_814
AAAGGGGGGGTTGGAACCAAGGCCAGCC
42._RUQ_815
AAAAGGGGGGTTGGAACCAAGGCCGGCC
43._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
44._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
45._GC-03-23-2-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
46._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
47._GC-08-266-8-38
AAAAGGGGGGTTGGAACCAAGGCCGGCC
48._RUQ_1431
AAAAGGGGGGTTGGAACCAAGGCCGGCC
49._MITC-000612
AAAAGGGGGGTTGGAACCAAGGCCGGCC
50._GU_221_H_Fld#_162_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
51._GC-01-74-4-10
AAAGGGGGGGTTGGAACCAAGGCCGGCC
52._GC-01-75-4-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
53._RUQ_200
AAAAGGGGGGTTGGAACCAAGGCCGGCC
54._RUQ_1069
AAAAGGGGGGTTGGAACCAAGGCCGGCC
 5758596061626364656667686970
_Input profile
CCGGGGAAAAAACCAAAACCAAAAAACC
1._RUQ_1068
CCGGGGAAAAAACCAAAACCAAAAAACC
2._GC-01-95-5-12
CCGGGGAAAAAACCAAAACCAAAAAACC
3._RUQ_1549
CCGGGGAAAAAACCAAAACCAAAAAACC
4._MITC-000379
CCGGGGAAAAAACCAAAACCAAAAAACC
5._RUQ_880
CCGGGGGGAAAACCAAAACCAAAAAACC
6._RUQ_1545
CCGGGGAGAAAACCAAAACCAAAAAACC
7._GC-01-100-5-17
CCGGGGGGAAAACCAAAACCAAAAAACC
8._RUQ_768
CCGGGGAGAGAACCAAAACCAAAAAACC
9._MITC-000403
CCGGGGGGAAAACCAAAACCAAAAAACC
10._GU-156B_Fld#_198_Plt#_2
CCGGGGGGAAAACCAAAACCAAAAAACC
11._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
12._RUQ_813
CCGGGGAGAGAACCAAAACCAAAAAACC
13._RUQ_191
CCGGGGGGGGAACCAAAACCAAAAAACC
14._RUQ_222
CCGGGGGGAGAACCAAAAACAAAAAACC
15._MITC-000615
CCGGGGGGGGAACCAAAACCAAAAAACC
16._MITC-000578
CCGGGGGGGGAACCAAAACCAAAAAACC
17._GC-03-19-2-8
CCGGGGGGGGAACCAAAACCAAAAAACC
18._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
19._GC-08-172-4-15
CCGGGGGGGGAACCAAAACCAAAAAACC
20._RUQ_228
AAGGGGGGAAAACCAAAACCAAAAAACC
21._GC-01-73-4-9
ACGGGGGGGGAACCAAAACCAAAAAACC
22._GC-08-052-1-63
CCGGGGGGAGAACCAAAAACAAAAAACC
23._MITC-000047
ACGGGGAGAAAACCAAAACCAAAAAACC
24._GU_185_Fld#_200_Plt#_1
ACGGGGAGAAAACCAAAACCAAAAAACC
25._GC-08-170-4-13
CCGGGGAGAGAACCAAAACCAAAAAACC
26._GC-01-138-7-17
CCGGGGGGAAAACCAAAACCAAAAAACC
27._GC-01-76-4-12
ACGGGGGGGGAACCAAAACCAAAAAACC
28._RUQ_1543
AAGGGGAGAAAACCAAAAACAAAAAACC
29._GC-01-80-4-16
AAGGGGAGGGAACCAAAACCAAAAAACC
30._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
31._GC-04-23-2-5
ACGGGGGGAGAACCAAAAACAAAAAACC
32._RUQ_188
ACGGGGGGGGAACCAAAACCAAAAAACC
33._RUQ_1370
ACGGGGGGAGAACCAAAACCAAAAAACC
34._RUQ_771
ACGGGGGGAAAACCAAAACCAAAAAACC
35._MITC-000670
ACGGGGGGGGAACCAAAACCAAAAAACC
36._MITC-000581
ACGGGGGGAGAACCAAAACCAAAAAACC
37._GC-01-78-4-14
ACGGGGGGGGAACCAAAACCAAAAAACC
38._GC-01-116-6-13
ACGGGGGGGGAACCAAAACCAAAAAACC
39._GC-08-268-8-40
CCGGGGGGGGAACCAAAAAAAAAAAACC
40._RUQ_195
CCGGGGGGGGAACCAAAAACAAAAAACC
41._RUQ_814
AAGGGGGGGGAACCAAAAACAAAAAACC
42._RUQ_815
CCGGGGGGGGAACCAAAAAAAAAAAACC
43._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
44._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
45._GC-03-23-2-12
CCGGGGGGAGAACCAAAACCAAAAAACC
46._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
47._GC-08-266-8-38
ACGGGGGGAGAACCAAAAACAAAAAACC
48._RUQ_1431
ACGGGGGGAGAACCAAAAACAAAAAACC
49._MITC-000612
ACGGGGGGAGAACCAAAAACAAAAAACC
50._GU_221_H_Fld#_162_Plt#_1
CCGGGGGGAGAACCAAAAAAAAAAAACC
51._GC-01-74-4-10
CCGGGGGGAGAACCAAAAAAAAAAAACC
52._GC-01-75-4-11
ACGGGGGGAGAACCAAAAAAAAAAAACC
53._RUQ_200
ACGGGGGGAGAACCAAAAAAAAAAAACC
54._RUQ_1069
AAGGGGGGAAAACCAAAAACAAAAAACC
 717273747576777879808182  
_Input profile
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
1._RUQ_1068
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
2._GC-01-95-5-12
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
3._RUQ_1549
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
4._MITC-000379
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
5._RUQ_880
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
6._RUQ_1545
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
7._GC-01-100-5-17
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
8._RUQ_768
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
9._MITC-000403
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
10._GU-156B_Fld#_198_Plt#_2
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
11._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
12._RUQ_813
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
13._RUQ_191
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
14._RUQ_222
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
15._MITC-000615
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
16._MITC-000578
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
17._GC-03-19-2-8
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
18._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
19._GC-08-172-4-15
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
20._RUQ_228
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
21._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
22._GC-08-052-1-63
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
23._MITC-000047
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
24._GU_185_Fld#_200_Plt#_1
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
25._GC-08-170-4-13
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
26._GC-01-138-7-17
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
27._GC-01-76-4-12
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
28._RUQ_1543
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
29._GC-01-80-4-16
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
30._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
31._GC-04-23-2-5
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
32._RUQ_188
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
33._RUQ_1370
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
34._RUQ_771
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
35._MITC-000670
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
36._MITC-000581
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
37._GC-01-78-4-14
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
38._GC-01-116-6-13
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
39._GC-08-268-8-40
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
40._RUQ_195
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
41._RUQ_814
GGCCGGGGGGCCGGGGGGAAAAGGX_XX_X
42._RUQ_815
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
43._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
44._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
45._GC-03-23-2-12
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
46._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
47._GC-08-266-8-38
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
48._RUQ_1431
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
49._MITC-000612
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
50._GU_221_H_Fld#_162_Plt#_1
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
51._GC-01-74-4-10
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
52._GC-01-75-4-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
53._RUQ_200
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
54._RUQ_1069
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X

Input profile: GU_123_/V MITC-000597

 
USDA-SHRS, United States of America
 Mars, 2018

1._GU_123_/V RUQ_1068

identical
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

2._GU_123_/C GC-01-95-5-12

99.4 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

3._GU_255_/V RUQ_1549

97.6 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._GU_255_/P MITC-000379

97.6 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

5._CRU_156 RUQ_880

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

6._GU_263_/V RUQ_1545

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

7._GU_175 GC-01-100-5-17

95 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

8._GU_219_/F RUQ_768

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

9._GU_156_B MITC-000403

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

10._GU_156_B GU-156B_Fld#_198_Plt#_2

93.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 198, Tree: 2
 Mars, 2018

11._GU_144_/C GC-01-73-4-9

93.3 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

12._GU_114_/P RUQ_813

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

13._GU_144_/C RUQ_191

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

14._GU_147_/H RUQ_222

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

15._GU_144_/C MITC-000615

93.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

16._GU_144_/C MITC-000578

93.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

17._GU_136_/H GC-03-19-2-8

93.2 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 8, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._GU_144_/C GC-01-73-4-9

93.2 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._GU_151 GC-08-172-4-15

93.2 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 1, Rep: 15, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

20._GU_249_/H RUQ_228

93.2 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

21._GU_144_/C GC-01-73-4-9

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

22._GU_335 GC-08-052-1-63

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 63, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

23._GU_185_/G MITC-000047

92.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

24._GU_185 GU_185_Fld#_200_Plt#_1

92.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 200, Tree: 1
 Mars, 2018

25._GU_114 GC-08-170-4-13

92.6 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

26._GU_125_/C GC-01-138-7-17

92.6 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 7, Rep: 17, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

27._GU_296_/H GC-01-76-4-12

92.6 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

28._GU_183_/G RUQ_1543

92.6 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

29._GU_147_/H GC-01-80-4-16

92.5 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 16, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

30._GU_261 GC-01-72-4-8

92.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

31._GU_353 GC-04-23-2-5

92.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 2, Rep: 5, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

32._GU_125_/C RUQ_188

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

33._GU_261_/P RUQ_1370

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._GU_277_/G RUQ_771

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

35._GU_133_/C MITC-000670

92.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

36._GU_261 MITC-000581

92.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

37._GU_154_/C GC-01-78-4-14

92 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

38._GU_133_/C GC-01-116-6-13

91.9 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 13, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

39._GU_310 GC-08-268-8-40

91.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

40._GU_171_/C RUQ_195

91.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

41._GU_243_/H RUQ_814

91.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

42._GU_310_/P RUQ_815

91.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

43._GU_171_/C GC-01-94-5-11

91.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

44._GU_261 GC-01-72-4-8

91.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

45._GU_168_/H GC-03-23-2-12

91.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

46._GU_171_/C GC-01-94-5-11

91.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

47._GU_241 GC-08-266-8-38

90.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

48._GU_241_/P RUQ_1431

90.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

49._GU_241_/P MITC-000612

90.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

50._GU_221_/H GU_221_H_Fld#_162_Plt#_1

90.9 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

51._GU_221_/H GC-01-74-4-10

90.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

52._GU_221_/C GC-01-75-4-11

90.2 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

53._GU_221_/C RUQ_200

90.2 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

54._GU_195_/V RUQ_1069

90.1 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998