SNP Profiles matching GU 144 /C

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 Key

 1234567891011121314
_Input profile
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
1._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
2._RUQ_191
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
3._MITC-000578
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
4._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
5._RUQ_768
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
6._GC-03-19-2-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
7._GC-08-172-4-15
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
8._GC-08-268-8-40
CCAAAACCAAGGGGCCAAGGGGAAGGAA
9._RUQ_880
CCACAGCCAAGGGGCCAAGGGGAAGGAA
10._RUQ_815
CCAAAACCAAGGGGCCAAGGGGAAGGAA
11._MITC-000403
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
12._GU-156B_Fld#_198_Plt#_2
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
13._GC-01-100-5-17
CCACAGCCAAGGGGCCAAGGGGAAGGAA
14._RUQ_813
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
15._RUQ_188
CCACAACCAAGGGGCCAAGGGGAAGGAA
16._GU_221_H_Fld#_162_Plt#_1
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
17._GC-01-78-4-14
CCACAACCAAGGGGCCAAGGGGAAGGAA
18._GC-01-74-4-10
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
19._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
20._GC-08-052-1-63
CCAAAACCAAGGGGCCAAGGGGAAGGAA
21._RUQ_1549
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
22._MITC-000379
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
23._GC-08-170-4-13
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
24._GC-01-138-7-17
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
25._GC-01-76-4-12
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
26._RUQ_1069
CCAAAACCAAGGGGCCAAGGGGAAGGAA
27._GC-01-95-5-12
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
28._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
29._RUQ_222
CCAAAACCAAGGGGCCAAGGGGAAGGAA
30._RUQ_1370
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
31._RUQ_771
CCACAGCCAAGGGGCCAAGGGGAAGGAA
32._MITC-000670
CCACGGCCAAGGGGCCAAGGGGAAGGAA
33._MITC-000581
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
34._RUQ_228
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
35._GC-01-116-6-13
CCACGGCCAAGGGGCCAAGGGGAAGGAA
36._GC-01-75-4-11
CCAAAACCAAGGGGCCAAGGGGAAGGAA
37._RUQ_200
CCAAAACCAAGGGGCCAAGGGGAAGGAA
38._RUQ_814
CCACAGCCAAGGGGCCAAGGGGAAGGAA
39._RUQ_1545
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
40._MITC-000597
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
41._MITC-000047
CCACAGCCAAGGGGCCAAGGGGAAGGAA
42._GU_185_Fld#_200_Plt#_1
CCACAGCCAAGGGGCCAAGGGGAAGGAA
43._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
44._RUQ_1068
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
45._GC-01-80-4-16
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
46._GC-08-266-8-38
CCACAGCCAAGGGGCCAAGGGGAAGGAA
47._GC-04-23-2-5
CCAAAACCAAGGGGCCAAGGGGAAGGAA
48._RUQ_1431
CCACAGCCAAGGGGCCAAGGGGAAGGAA
49._MITC-000612
CCACAGCCAAGGGGCCAAGGGGAAGGAA
50._RUQ_195
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
51._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
52._GC-03-23-2-12
CCCCAACCAAGGGGCCAAGGGGAAGGAA
53._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
54._RUQ_406
CCAAAACCAAGGGGCCAAGGGGAAGGAA
55._RUQ_1543
CCACGGCCAAGGGGCCAAGGGGAAGGAA
 1516171819202122232425262728
_Input profile
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
1._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
2._RUQ_191
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
3._MITC-000578
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
4._GC-01-73-4-9
AAAAAAAG_GGAAGGAAGGCCGGAAAA
5._RUQ_768
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
6._GC-03-19-2-8
AAAAAAAAACGGAAGGAAGGCCGGAAAA
7._GC-08-172-4-15
AAAAAAAA_GGAAGGAAGGCCGGAAAA
8._GC-08-268-8-40
AAAAAAAACCGGAAGGAAGGCCGGAAAA
9._RUQ_880
AAAAAAAACCGGAAGGAAGGCCGGAAAA
10._RUQ_815
AAAAAAAACCGGAAGGAAGGCCGGAAAA
11._MITC-000403
AAAAAAAACCGGAAGGAAGGGGGGAAAA
12._GU-156B_Fld#_198_Plt#_2
AAAAAAAACCGGAAGGAAGGGGGGAAAA
13._GC-01-100-5-17
AAAAAAAA_GGAAGGAAGGCCGGAAAA
14._RUQ_813
AAAAAAAGCCGGAAGGAAGGGGGGAAAA
15._RUQ_188
AAAAAAAACCGGAAGGAAGGCGGGAAAA
16._GU_221_H_Fld#_162_Plt#_1
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
17._GC-01-78-4-14
AAAAAAAA_GGAAGGAAGGCGGGAAAA
18._GC-01-74-4-10
AAAAAAAG_GGAAGGAAGGCCAGAAAA
19._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
20._GC-08-052-1-63
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
21._RUQ_1549
AAAAAAAACCGGAAGGAAGGCCGGAAAA
22._MITC-000379
AAAAAAAACCGGAAGGAAGGCCGGAAAA
23._GC-08-170-4-13
AAAAAAAGACGGAAGGAAGGGGGGAAAA
24._GC-01-138-7-17
AAAAAAAA_GGAAGGAAGGGGGGAAAA
25._GC-01-76-4-12
AAAAAAAG_GGAAGGAAGGCGGGAAAA
26._RUQ_1069
AAAAAAGG_GGAAGGAAGGCCGGAAAA
27._GC-01-95-5-12
AAAAAAAACCGGAAGGAAGGCCGGAAAA
28._GC-01-72-4-8
AAAAAAAACCGGAAGGAAGGGGGGAAAA
29._RUQ_222
AAAAAAAACCGGAAGGAAGGCCAGAAAA
30._RUQ_1370
AAAAAAAACCGGAAGGAAGGGGGGAAAA
31._RUQ_771
AAAAAAAACCGGAAGGAAGGGGGGAAAA
32._MITC-000670
AAAAAAAACCGGAAGGAAGGCGGGAAAA
33._MITC-000581
AAAAAAAACCGGAAGGAAGGGGGGAAAA
34._RUQ_228
AAAAAAAA_GGAAGGACGGCGGGAAAA
35._GC-01-116-6-13
AAAAAAAA_GGAAGGAAGGCGGGAAAA
36._GC-01-75-4-11
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
37._RUQ_200
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
38._RUQ_814
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
39._RUQ_1545
AAAAAAAACCGGAAGGAAGGGGGGAAAA
40._MITC-000597
AAAAAAAACCGGAAGGAAGGCCGGAAAA
41._MITC-000047
AAAAAAAACCGGAAGGACGGGGGGAAAA
42._GU_185_Fld#_200_Plt#_1
AAAAAAAACCGGAAGGACGGGGGGAAAA
43._GC-01-72-4-8
AAAAAAAAACGGAAGGAAGGGGGGAAAA
44._RUQ_1068
AAAAAAAA_GGAAGGAAGGCCGGAAAA
45._GC-01-80-4-16
AAAAAAAA_GGAAGGAAGGGGGGAAAA
46._GC-08-266-8-38
AAAAAAAACCGGAAGGAAGGCGAGAAAA
47._GC-04-23-2-5
AAAAAAGGACGGAAGGAAGGCCGGAAAA
48._RUQ_1431
AAAAAAAACCGGAAGGAAGGCGAGAAAA
49._MITC-000612
AAAAAAAACCGGAAGGAAGGCGAGAAAA
50._RUQ_195
AAAAAAAACCGGAAGGAAGGCCAAAAAA
51._GC-01-94-5-11
AAAAAAAACCGGAAGGAAGGCCAAAAAA
52._GC-03-23-2-12
AAAAAAAA_GGAAGGAAGGGGGGAAAA
53._GC-01-94-5-11
AAAAAAAA_GGAAGGAAGGCCAAAAAA
54._RUQ_406
AAAAAAGG_GGAAGGCCGGCCGGAAAA
55._RUQ_1543
AAAAAAAG_GGAAGGAAGGCGGGAAAA
 2930313233343536373839404142
_Input profile
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
1._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
2._RUQ_191
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
3._MITC-000578
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
4._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
5._RUQ_768
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
6._GC-03-19-2-8
GGTTGGAAGGGGGGGGGG_TTATGGGG
7._GC-08-172-4-15
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
8._GC-08-268-8-40
GGTTGGAAGGGGGGGGGGCCTTATGGGG
9._RUQ_880
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
10._RUQ_815
GGTTGGAAGGGGGGGGGGCCTTATGGGG
11._MITC-000403
GGTTGGAAGGGGGGGGGGCCTTATGGGG
12._GU-156B_Fld#_198_Plt#_2
GGTTGGAAGGGGGGGGGGCCTTATGGGG
13._GC-01-100-5-17
GGTTGGAAGGGGGGGGGG_TTTTGGGG
14._RUQ_813
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
15._RUQ_188
GGTTGGAAGGGGGGGGGGCCTTATGGGG
16._GU_221_H_Fld#_162_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
17._GC-01-78-4-14
GGTTGGAAGGGGGGGGGGCCTTATGGGG
18._GC-01-74-4-10
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
19._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
20._GC-08-052-1-63
GGTTGGAAGGGGGGGGGGCCTTATGGGG
21._RUQ_1549
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
22._MITC-000379
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
23._GC-08-170-4-13
GGTTGGAAGGGGGGGGGG_TTAAGGGG
24._GC-01-138-7-17
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
25._GC-01-76-4-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
26._RUQ_1069
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
27._GC-01-95-5-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
28._GC-01-72-4-8
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
29._RUQ_222
GGTTGGAAGGGGGGGGGGCCTTATGGGG
30._RUQ_1370
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
31._RUQ_771
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
32._MITC-000670
GGTTGGAAGGGGGGGGGGCCTTATGGGG
33._MITC-000581
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
34._RUQ_228
GGTTGGAAGGGGGGGGGGCCTTATGGGG
35._GC-01-116-6-13
GGTTGGAAGGGGGGGGGG_TTATGGGG
36._GC-01-75-4-11
GGTTGGAAGGGGGGGGGGCCTTATGGGG
37._RUQ_200
GGTTGGAAGGGGGGGGGGCCTTATGGGG
38._RUQ_814
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
39._RUQ_1545
GGTTGGAAGGGGGGGGGGCCTTATGGGG
40._MITC-000597
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
41._MITC-000047
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
42._GU_185_Fld#_200_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
43._GC-01-72-4-8
GGTTGGAAGGGGGGGGGG_TTAAGGGG
44._RUQ_1068
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
45._GC-01-80-4-16
GGTTGGAAGGGGGGGGGG_TTATGGGG
46._GC-08-266-8-38
GGTTGGAAGGGGGGGGGGCCTTATAGGG
47._GC-04-23-2-5
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
48._RUQ_1431
GGTTGGAAGGGGGGGGGGCCTTATAGGG
49._MITC-000612
GGTTGGAAGGGGGGGGGGCCTTATAGGG
50._RUQ_195
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
51._GC-01-94-5-11
GGTTGGAAGGGGGGGGGG_TTTTGGGG
52._GC-03-23-2-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
53._GC-01-94-5-11
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
54._RUQ_406
GGTTGGAAGGGGGGGGGGCCTTTTAAGG
55._RUQ_1543
GGTTGGAAGGGGGGGGGGCCTTATAGGG
 4344454647484950515253545556
_Input profile
AAAGGGGGGGTTGGAACCAAGGCCAGCC
1._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
2._RUQ_191
AAAGGGGGGGTTGGAACCAAGGCCAGCC
3._MITC-000578
AAAGGGGGGGTTGGAACCAAGGCCAGCC
4._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
5._RUQ_768
AAAAGGGGGGTTGGAACCAAGGCCGGCC
6._GC-03-19-2-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
7._GC-08-172-4-15
AAAAGGGGGGTTGGAACCAAGGCCGGCC
8._GC-08-268-8-40
AAAAGGGGGGTTGGAACCAAGGCCGGCC
9._RUQ_880
AAAAGGGGGGTTGGAACCAAGGCCAGCC
10._RUQ_815
AAAAGGGGGGTTGGAACCAAGGCCGGCC
11._MITC-000403
AAAGGGGGGGTTGGAACCAAGGCCGGCC
12._GU-156B_Fld#_198_Plt#_2
AAAGGGGGGGTTGGAACCAAGGCCGGCC
13._GC-01-100-5-17
AAAAGGGGGGTTGGAACCAAGGCCAGCC
14._RUQ_813
AAAAGGGGGGTTGGAACCAAGGCCGGCC
15._RUQ_188
AAAGGGGGGGTTGGAACCAAGGCCGGCC
16._GU_221_H_Fld#_162_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
17._GC-01-78-4-14
AAAGGGGGGGTTGGAACCAAGGCCGGCC
18._GC-01-74-4-10
AAAGGGGGGGTTGGAACCAAGGCCGGCC
19._GC-01-73-4-9
AAAAGGGGGGTTGGAACCAAGGCCGGCC
20._GC-08-052-1-63
AAAAGGGGGGTTGGAACCAAGGCCGGCC
21._RUQ_1549
AAGGGGGGGGTTGGAACCAAGGCCAACC
22._MITC-000379
AAGGGGGGGGTTGGAACCAAGGCCAACC
23._GC-08-170-4-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
24._GC-01-138-7-17
AAAAGGGGGGTTGGAACCAAGGCCGGCC
25._GC-01-76-4-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
26._RUQ_1069
AAAAGGGGGGTTGGAACCAAGGCCGGCC
27._GC-01-95-5-12
AAGGGGGGGGTTGGAACCAAGGCCAGCC
28._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
29._RUQ_222
AAAAGGGGGGTTGGAACCAAGGCCGGCC
30._RUQ_1370
AAAAGGGGGGTTGGAACCAAGGCCGGCC
31._RUQ_771
AAAAGGGGGGTTGGAACCAAGGCCGGCC
32._MITC-000670
AAAAGGGGGGTTGGAACCAAGGCCGGCC
33._MITC-000581
AAAAGGGGGGTTGGAACCAAGGCCGGCC
34._RUQ_228
AAAGGGGGGGTTGGAACCAAGGCCGGCC
35._GC-01-116-6-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
36._GC-01-75-4-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
37._RUQ_200
AAAAGGGGGGTTGGAACCAAGGCCGGCC
38._RUQ_814
AAAGGGGGGGTTGGAACCAAGGCCAGCC
39._RUQ_1545
AAAAGGGGGGTTGGAACCAAGGCCAGCC
40._MITC-000597
AAGGGGGGGGTTGGAACCAAGGCCAGCC
41._MITC-000047
AAAGGGGGGGTTGGAACCAAGGCCGGCC
42._GU_185_Fld#_200_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
43._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
44._RUQ_1068
AAGGGGGGGGTTGGAACCAAGGCCAGCC
45._GC-01-80-4-16
AAAGGGGGGGTTGGAACCAAGGCCGGCC
46._GC-08-266-8-38
AAAAGGGGGGTTGGAACCAAGGCCGGCC
47._GC-04-23-2-5
AAAAGGGGGGTTGGAACCAAGGCCGGCC
48._RUQ_1431
AAAAGGGGGGTTGGAACCAAGGCCGGCC
49._MITC-000612
AAAAGGGGGGTTGGAACCAAGGCCGGCC
50._RUQ_195
AAAAGGGGGGTTGGAACCAAGGCCGGCC
51._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
52._GC-03-23-2-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
53._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
54._RUQ_406
AAAAGGGGGGAAGGAACCAAGGCCAGCC
55._RUQ_1543
AAAGGGGGGGTTGGAACCAAGGCCGGCC
 5758596061626364656667686970
_Input profile
CCGGGGGGGGAACCAAAACCAAAAAACC
1._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
2._RUQ_191
CCGGGGGGGGAACCAAAACCAAAAAACC
3._MITC-000578
CCGGGGGGGGAACCAAAACCAAAAAACC
4._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
5._RUQ_768
CCGGGGAGAGAACCAAAACCAAAAAACC
6._GC-03-19-2-8
CCGGGGGGGGAACCAAAACCAAAAAACC
7._GC-08-172-4-15
CCGGGGGGGGAACCAAAACCAAAAAACC
8._GC-08-268-8-40
CCGGGGGGGGAACCAAAAAAAAAAAACC
9._RUQ_880
CCGGGGGGAAAACCAAAACCAAAAAACC
10._RUQ_815
CCGGGGGGGGAACCAAAAAAAAAAAACC
11._MITC-000403
CCGGGGGGAAAACCAAAACCAAAAAACC
12._GU-156B_Fld#_198_Plt#_2
CCGGGGGGAAAACCAAAACCAAAAAACC
13._GC-01-100-5-17
CCGGGGGGAAAACCAAAACCAAAAAACC
14._RUQ_813
CCGGGGAGAGAACCAAAACCAAAAAACC
15._RUQ_188
ACGGGGGGGGAACCAAAACCAAAAAACC
16._GU_221_H_Fld#_162_Plt#_1
CCGGGGGGAGAACCAAAAAAAAAAAACC
17._GC-01-78-4-14
ACGGGGGGGGAACCAAAACCAAAAAACC
18._GC-01-74-4-10
CCGGGGGGAGAACCAAAAAAAAAAAACC
19._GC-01-73-4-9
ACGGGGGGGGAACCAAAACCAAAAAACC
20._GC-08-052-1-63
CCGGGGGGAGAACCAAAAACAAAAAACC
21._RUQ_1549
CCGGGGAAAAAACCAAAACCAAAAAACC
22._MITC-000379
CCGGGGAAAAAACCAAAACCAAAAAACC
23._GC-08-170-4-13
CCGGGGAGAGAACCAAAACCAAAAAACC
24._GC-01-138-7-17
CCGGGGGGAAAACCAAAACCAAAAAACC
25._GC-01-76-4-12
ACGGGGGGGGAACCAAAACCAAAAAACC
26._RUQ_1069
AAGGGGGGAAAACCAAAAACAAAAAACC
27._GC-01-95-5-12
CCGGGGAAAAAACCAAAACCAAAAAACC
28._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
29._RUQ_222
CCGGGGGGAGAACCAAAAACAAAAAACC
30._RUQ_1370
ACGGGGGGAGAACCAAAACCAAAAAACC
31._RUQ_771
ACGGGGGGAAAACCAAAACCAAAAAACC
32._MITC-000670
ACGGGGGGGGAACCAAAACCAAAAAACC
33._MITC-000581
ACGGGGGGAGAACCAAAACCAAAAAACC
34._RUQ_228
AAGGGGGGAAAACCAAAACCAAAAAACC
35._GC-01-116-6-13
ACGGGGGGGGAACCAAAACCAAAAAACC
36._GC-01-75-4-11
ACGGGGGGAGAACCAAAAAAAAAAAACC
37._RUQ_200
ACGGGGGGAGAACCAAAAAAAAAAAACC
38._RUQ_814
AAGGGGGGGGAACCAAAAACAAAAAACC
39._RUQ_1545
CCGGGGAGAAAACCAAAACCAAAAAACC
40._MITC-000597
CCGGGGAAAAAACCAAAACCAAAAAACC
41._MITC-000047
ACGGGGAGAAAACCAAAACCAAAAAACC
42._GU_185_Fld#_200_Plt#_1
ACGGGGAGAAAACCAAAACCAAAAAACC
43._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
44._RUQ_1068
CCGGGGAAAAAACCAAAACCAAAAAACC
45._GC-01-80-4-16
AAGGGGAGGGAACCAAAACCAAAAAACC
46._GC-08-266-8-38
ACGGGGGGAGAACCAAAAACAAAAAACC
47._GC-04-23-2-5
ACGGGGGGAGAACCAAAAACAAAAAACC
48._RUQ_1431
ACGGGGGGAGAACCAAAAACAAAAAACC
49._MITC-000612
ACGGGGGGAGAACCAAAAACAAAAAACC
50._RUQ_195
CCGGGGGGGGAACCAAAAACAAAAAACC
51._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
52._GC-03-23-2-12
CCGGGGGGAGAACCAAAACCAAAAAACC
53._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
54._RUQ_406
CCGGGGGGGGAACCAAAAAAAAAAAACC
55._RUQ_1543
AAGGGGAGAAAACCAAAAACAAAAAACC
 717273747576777879808182  
_Input profile
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
1._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
2._RUQ_191
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
3._MITC-000578
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
4._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
5._RUQ_768
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
6._GC-03-19-2-8
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
7._GC-08-172-4-15
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
8._GC-08-268-8-40
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
9._RUQ_880
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
10._RUQ_815
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
11._MITC-000403
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
12._GU-156B_Fld#_198_Plt#_2
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
13._GC-01-100-5-17
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
14._RUQ_813
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
15._RUQ_188
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
16._GU_221_H_Fld#_162_Plt#_1
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
17._GC-01-78-4-14
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
18._GC-01-74-4-10
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
19._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
20._GC-08-052-1-63
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
21._RUQ_1549
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
22._MITC-000379
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
23._GC-08-170-4-13
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
24._GC-01-138-7-17
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
25._GC-01-76-4-12
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
26._RUQ_1069
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
27._GC-01-95-5-12
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
28._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
29._RUQ_222
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
30._RUQ_1370
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
31._RUQ_771
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
32._MITC-000670
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
33._MITC-000581
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
34._RUQ_228
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
35._GC-01-116-6-13
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
36._GC-01-75-4-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
37._RUQ_200
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
38._RUQ_814
GGCCGGGGGGCCGGGGGGAAAAGGX_XX_X
39._RUQ_1545
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
40._MITC-000597
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
41._MITC-000047
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
42._GU_185_Fld#_200_Plt#_1
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
43._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
44._RUQ_1068
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
45._GC-01-80-4-16
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
46._GC-08-266-8-38
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
47._GC-04-23-2-5
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
48._RUQ_1431
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
49._MITC-000612
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
50._RUQ_195
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
51._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
52._GC-03-23-2-12
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
53._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
54._RUQ_406
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
55._RUQ_1543
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X

Input profile: GU_144_/C MITC-000615

 
USDA-SHRS, United States of America
 Mars, 2018

1._GU_144_/C GC-01-73-4-9

identical
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

2._GU_144_/C RUQ_191

identical
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._GU_144_/C MITC-000578

identical
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

4._GU_144_/C GC-01-73-4-9

identical
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

5._GU_219_/F RUQ_768

97 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

6._GU_136_/H GC-03-19-2-8

96.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 8, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

7._GU_151 GC-08-172-4-15

96.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 1, Rep: 15, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

8._GU_310 GC-08-268-8-40

95.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

9._CRU_156 RUQ_880

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

10._GU_310_/P RUQ_815

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

11._GU_156_B MITC-000403

95.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

12._GU_156_B GU-156B_Fld#_198_Plt#_2

95.7 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 198, Tree: 2
 Mars, 2018

13._GU_175 GC-01-100-5-17

95.6 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

14._GU_114_/P RUQ_813

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

15._GU_125_/C RUQ_188

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

16._GU_221_/H GU_221_H_Fld#_162_Plt#_1

95.1 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

17._GU_154_/C GC-01-78-4-14

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._GU_221_/H GC-01-74-4-10

95.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._GU_144_/C GC-01-73-4-9

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

20._GU_335 GC-08-052-1-63

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 63, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

21._GU_255_/V RUQ_1549

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._GU_255_/P MITC-000379

94.5 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

23._GU_114 GC-08-170-4-13

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

24._GU_125_/C GC-01-138-7-17

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 7, Rep: 17, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

25._GU_296_/H GC-01-76-4-12

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

26._GU_195_/V RUQ_1069

94.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

27._GU_123_/C GC-01-95-5-12

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

28._GU_261 GC-01-72-4-8

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

29._GU_147_/H RUQ_222

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

30._GU_261_/P RUQ_1370

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

31._GU_277_/G RUQ_771

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

32._GU_133_/C MITC-000670

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

33._GU_261 MITC-000581

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

34._GU_249_/H RUQ_228

93.8 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

35._GU_133_/C GC-01-116-6-13

93.8 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 13, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

36._GU_221_/C GC-01-75-4-11

93.3 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

37._GU_221_/C RUQ_200

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

38._GU_243_/H RUQ_814

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

39._GU_263_/V RUQ_1545

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

40._GU_123_/V MITC-000597

93.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

41._GU_185_/G MITC-000047

93.3 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

42._GU_185 GU_185_Fld#_200_Plt#_1

93.3 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 200, Tree: 1
 Mars, 2018

43._GU_261 GC-01-72-4-8

93.2 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

44._GU_123_/V RUQ_1068

93.2 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

45._GU_147_/H GC-01-80-4-16

93.1 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 16, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

46._GU_241 GC-08-266-8-38

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

47._GU_353 GC-04-23-2-5

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 2, Rep: 5, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

48._GU_241_/P RUQ_1431

92.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

49._GU_241_/P MITC-000612

92.7 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

50._GU_171_/C RUQ_195

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

51._GU_171_/C GC-01-94-5-11

92 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

52._GU_168_/H GC-03-23-2-12

92 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

53._GU_171_/C GC-01-94-5-11

92 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

54._KER_3 RUQ_406

92 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

55._GU_183_/G RUQ_1543

90.7 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998