SNP Profiles matching GU 133 /C

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 Key

 1234567891011121314
_Input profile
CCACGGCCAAGGGGCCAAGGGGAAGGAA
1._GC-01-116-6-13
CCACGGCCAAGGGGCCAAGGGGAAGGAA
2._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
3._RUQ_188
CCACAACCAAGGGGCCAAGGGGAAGGAA
4._RUQ_1370
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
5._MITC-000581
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
6._GC-08-172-4-15
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
7._GC-01-78-4-14
CCACAACCAAGGGGCCAAGGGGAAGGAA
8._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
9._GC-01-72-4-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
10._GC-01-76-4-12
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
11._GC-01-80-4-16
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
12._RUQ_771
CCACAGCCAAGGGGCCAAGGGGAAGGAA
13._GC-03-19-2-8
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
14._RUQ_1545
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
15._GC-01-138-7-17
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
16._GC-03-23-2-12
CCCCAACCAAGGGGCCAAGGGGAAGGAA
17._GC-08-266-8-38
CCACAGCCAAGGGGCCAAGGGGAAGGAA
18._RUQ_813
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
19._RUQ_1431
CCACAGCCAAGGGGCCAAGGGGAAGGAA
20._MITC-000612
CCACAGCCAAGGGGCCAAGGGGAAGGAA
21._RUQ_228
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
22._GC-08-268-8-40
CCAAAACCAAGGGGCCAAGGGGAAGGAA
23._GC-08-052-1-63
CCAAAACCAAGGGGCCAAGGGGAAGGAA
24._RUQ_880
CCACAGCCAAGGGGCCAAGGGGAAGGAA
25._RUQ_815
CCAAAACCAAGGGGCCAAGGGGAAGGAA
26._MITC-000403
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
27._MITC-000047
CCACAGCCAAGGGGCCAAGGGGAAGGAA
28._GU_185_Fld#_200_Plt#_1
CCACAGCCAAGGGGCCAAGGGGAAGGAA
29._GU-156B_Fld#_198_Plt#_2
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
30._GC-08-170-4-13
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
31._RUQ_1543
CCACGGCCAAGGGGCCAAGGGGAAGGAA
32._GC-01-100-5-17
CCACAGCCAAGGGGCCAAGGGGAAGGAA
33._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
34._RUQ_191
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
35._RUQ_222
CCAAAACCAAGGGGCCAAGGGGAAGGAA
36._MITC-000615
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
37._MITC-000578
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
38._GC-01-73-4-9
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
39._RUQ_195
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
40._RUQ_768
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
41._RUQ_814
CCACAGCCAAGGGGCCAAGGGGAAGGAA
42._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
43._GC-01-94-5-11
CCCCGGCCAAGGGGCCAAGGGGAAGGAA
44._GC-04-23-2-5
CCAAAACCAAGGGGCCAAGGGGAAGGAA
45._GC-01-75-4-11
CCAAAACCAAGGGGCCAAGGGGAAGGAA
46._RUQ_200
CCAAAACCAAGGGGCCAAGGGGAAGGAA
47._RUQ_1549
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
48._MITC-000597
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
49._MITC-000379
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
50._RUQ_1068
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
51._RUQ_1069
CCAAAACCAAGGGGCCAAGGGGAAGGAA
52._GC-01-95-5-12
CCAAGGCCAAGGGGCCAAGGGGAAGGAA
53._GU_221_H_Fld#_162_Plt#_1
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
54._GC-01-74-4-10
CCAAAGCCAAGGGGCCAAGGGGAAGGAA
 1516171819202122232425262728
_Input profile
AAAAAAAACCGGAAGGAAGGCGGGAAAA
1._GC-01-116-6-13
AAAAAAAA_GGAAGGAAGGCGGGAAAA
2._GC-01-72-4-8
AAAAAAAACCGGAAGGAAGGGGGGAAAA
3._RUQ_188
AAAAAAAACCGGAAGGAAGGCGGGAAAA
4._RUQ_1370
AAAAAAAACCGGAAGGAAGGGGGGAAAA
5._MITC-000581
AAAAAAAACCGGAAGGAAGGGGGGAAAA
6._GC-08-172-4-15
AAAAAAAA_GGAAGGAAGGCCGGAAAA
7._GC-01-78-4-14
AAAAAAAA_GGAAGGAAGGCGGGAAAA
8._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
9._GC-01-72-4-8
AAAAAAAAACGGAAGGAAGGGGGGAAAA
10._GC-01-76-4-12
AAAAAAAG_GGAAGGAAGGCGGGAAAA
11._GC-01-80-4-16
AAAAAAAA_GGAAGGAAGGGGGGAAAA
12._RUQ_771
AAAAAAAACCGGAAGGAAGGGGGGAAAA
13._GC-03-19-2-8
AAAAAAAAACGGAAGGAAGGCCGGAAAA
14._RUQ_1545
AAAAAAAACCGGAAGGAAGGGGGGAAAA
15._GC-01-138-7-17
AAAAAAAA_GGAAGGAAGGGGGGAAAA
16._GC-03-23-2-12
AAAAAAAA_GGAAGGAAGGGGGGAAAA
17._GC-08-266-8-38
AAAAAAAACCGGAAGGAAGGCGAGAAAA
18._RUQ_813
AAAAAAAGCCGGAAGGAAGGGGGGAAAA
19._RUQ_1431
AAAAAAAACCGGAAGGAAGGCGAGAAAA
20._MITC-000612
AAAAAAAACCGGAAGGAAGGCGAGAAAA
21._RUQ_228
AAAAAAAA_GGAAGGACGGCGGGAAAA
22._GC-08-268-8-40
AAAAAAAACCGGAAGGAAGGCCGGAAAA
23._GC-08-052-1-63
AAAAAAAGCCGGAAGGAAGGCGGGAAAA
24._RUQ_880
AAAAAAAACCGGAAGGAAGGCCGGAAAA
25._RUQ_815
AAAAAAAACCGGAAGGAAGGCCGGAAAA
26._MITC-000403
AAAAAAAACCGGAAGGAAGGGGGGAAAA
27._MITC-000047
AAAAAAAACCGGAAGGACGGGGGGAAAA
28._GU_185_Fld#_200_Plt#_1
AAAAAAAACCGGAAGGACGGGGGGAAAA
29._GU-156B_Fld#_198_Plt#_2
AAAAAAAACCGGAAGGAAGGGGGGAAAA
30._GC-08-170-4-13
AAAAAAAGACGGAAGGAAGGGGGGAAAA
31._RUQ_1543
AAAAAAAG_GGAAGGAAGGCGGGAAAA
32._GC-01-100-5-17
AAAAAAAA_GGAAGGAAGGCCGGAAAA
33._GC-01-73-4-9
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
34._RUQ_191
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
35._RUQ_222
AAAAAAAACCGGAAGGAAGGCCAGAAAA
36._MITC-000615
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
37._MITC-000578
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
38._GC-01-73-4-9
AAAAAAAG_GGAAGGAAGGCCGGAAAA
39._RUQ_195
AAAAAAAACCGGAAGGAAGGCCAAAAAA
40._RUQ_768
AAAAAAAGCCGGAAGGAAGGCCGGAAAA
41._RUQ_814
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
42._GC-01-94-5-11
AAAAAAAACCGGAAGGAAGGCCAAAAAA
43._GC-01-94-5-11
AAAAAAAA_GGAAGGAAGGCCAAAAAA
44._GC-04-23-2-5
AAAAAAGGACGGAAGGAAGGCCGGAAAA
45._GC-01-75-4-11
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
46._RUQ_200
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
47._RUQ_1549
AAAAAAAACCGGAAGGAAGGCCGGAAAA
48._MITC-000597
AAAAAAAACCGGAAGGAAGGCCGGAAAA
49._MITC-000379
AAAAAAAACCGGAAGGAAGGCCGGAAAA
50._RUQ_1068
AAAAAAAA_GGAAGGAAGGCCGGAAAA
51._RUQ_1069
AAAAAAGG_GGAAGGAAGGCCGGAAAA
52._GC-01-95-5-12
AAAAAAAACCGGAAGGAAGGCCGGAAAA
53._GU_221_H_Fld#_162_Plt#_1
AAAAAAAGCCGGAAGGAAGGCCAGAAAA
54._GC-01-74-4-10
AAAAAAAG_GGAAGGAAGGCCAGAAAA
 2930313233343536373839404142
_Input profile
GGTTGGAAGGGGGGGGGGCCTTATGGGG
1._GC-01-116-6-13
GGTTGGAAGGGGGGGGGG_TTATGGGG
2._GC-01-72-4-8
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
3._RUQ_188
GGTTGGAAGGGGGGGGGGCCTTATGGGG
4._RUQ_1370
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
5._MITC-000581
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
6._GC-08-172-4-15
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
7._GC-01-78-4-14
GGTTGGAAGGGGGGGGGGCCTTATGGGG
8._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
9._GC-01-72-4-8
GGTTGGAAGGGGGGGGGG_TTAAGGGG
10._GC-01-76-4-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
11._GC-01-80-4-16
GGTTGGAAGGGGGGGGGG_TTATGGGG
12._RUQ_771
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
13._GC-03-19-2-8
GGTTGGAAGGGGGGGGGG_TTATGGGG
14._RUQ_1545
GGTTGGAAGGGGGGGGGGCCTTATGGGG
15._GC-01-138-7-17
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
16._GC-03-23-2-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
17._GC-08-266-8-38
GGTTGGAAGGGGGGGGGGCCTTATAGGG
18._RUQ_813
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
19._RUQ_1431
GGTTGGAAGGGGGGGGGGCCTTATAGGG
20._MITC-000612
GGTTGGAAGGGGGGGGGGCCTTATAGGG
21._RUQ_228
GGTTGGAAGGGGGGGGGGCCTTATGGGG
22._GC-08-268-8-40
GGTTGGAAGGGGGGGGGGCCTTATGGGG
23._GC-08-052-1-63
GGTTGGAAGGGGGGGGGGCCTTATGGGG
24._RUQ_880
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
25._RUQ_815
GGTTGGAAGGGGGGGGGGCCTTATGGGG
26._MITC-000403
GGTTGGAAGGGGGGGGGGCCTTATGGGG
27._MITC-000047
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
28._GU_185_Fld#_200_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
29._GU-156B_Fld#_198_Plt#_2
GGTTGGAAGGGGGGGGGGCCTTATGGGG
30._GC-08-170-4-13
GGTTGGAAGGGGGGGGGG_TTAAGGGG
31._RUQ_1543
GGTTGGAAGGGGGGGGGGCCTTATAGGG
32._GC-01-100-5-17
GGTTGGAAGGGGGGGGGG_TTTTGGGG
33._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
34._RUQ_191
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
35._RUQ_222
GGTTGGAAGGGGGGGGGGCCTTATGGGG
36._MITC-000615
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
37._MITC-000578
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
38._GC-01-73-4-9
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
39._RUQ_195
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
40._RUQ_768
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
41._RUQ_814
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
42._GC-01-94-5-11
GGTTGGAAGGGGGGGGGG_TTTTGGGG
43._GC-01-94-5-11
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
44._GC-04-23-2-5
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
45._GC-01-75-4-11
GGTTGGAAGGGGGGGGGGCCTTATGGGG
46._RUQ_200
GGTTGGAAGGGGGGGGGGCCTTATGGGG
47._RUQ_1549
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
48._MITC-000597
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
49._MITC-000379
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
50._RUQ_1068
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
51._RUQ_1069
GGTTGGAAGGGGGGGGGGCCTTAAGGGG
52._GC-01-95-5-12
GGTTGGAAGGGGGGGGGGCCTTTTGGGG
53._GU_221_H_Fld#_162_Plt#_1
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
54._GC-01-74-4-10
GGTTGGAAGGGGGGGGGGCCTTAAAGGG
 4344454647484950515253545556
_Input profile
AAAAGGGGGGTTGGAACCAAGGCCGGCC
1._GC-01-116-6-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
2._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
3._RUQ_188
AAAGGGGGGGTTGGAACCAAGGCCGGCC
4._RUQ_1370
AAAAGGGGGGTTGGAACCAAGGCCGGCC
5._MITC-000581
AAAAGGGGGGTTGGAACCAAGGCCGGCC
6._GC-08-172-4-15
AAAAGGGGGGTTGGAACCAAGGCCGGCC
7._GC-01-78-4-14
AAAGGGGGGGTTGGAACCAAGGCCGGCC
8._GC-01-73-4-9
AAAAGGGGGGTTGGAACCAAGGCCGGCC
9._GC-01-72-4-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
10._GC-01-76-4-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
11._GC-01-80-4-16
AAAGGGGGGGTTGGAACCAAGGCCGGCC
12._RUQ_771
AAAAGGGGGGTTGGAACCAAGGCCGGCC
13._GC-03-19-2-8
AAAAGGGGGGTTGGAACCAAGGCCGGCC
14._RUQ_1545
AAAAGGGGGGTTGGAACCAAGGCCAGCC
15._GC-01-138-7-17
AAAAGGGGGGTTGGAACCAAGGCCGGCC
16._GC-03-23-2-12
AAAAGGGGGGTTGGAACCAAGGCCGGCC
17._GC-08-266-8-38
AAAAGGGGGGTTGGAACCAAGGCCGGCC
18._RUQ_813
AAAAGGGGGGTTGGAACCAAGGCCGGCC
19._RUQ_1431
AAAAGGGGGGTTGGAACCAAGGCCGGCC
20._MITC-000612
AAAAGGGGGGTTGGAACCAAGGCCGGCC
21._RUQ_228
AAAGGGGGGGTTGGAACCAAGGCCGGCC
22._GC-08-268-8-40
AAAAGGGGGGTTGGAACCAAGGCCGGCC
23._GC-08-052-1-63
AAAAGGGGGGTTGGAACCAAGGCCGGCC
24._RUQ_880
AAAAGGGGGGTTGGAACCAAGGCCAGCC
25._RUQ_815
AAAAGGGGGGTTGGAACCAAGGCCGGCC
26._MITC-000403
AAAGGGGGGGTTGGAACCAAGGCCGGCC
27._MITC-000047
AAAGGGGGGGTTGGAACCAAGGCCGGCC
28._GU_185_Fld#_200_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
29._GU-156B_Fld#_198_Plt#_2
AAAGGGGGGGTTGGAACCAAGGCCGGCC
30._GC-08-170-4-13
AAAAGGGGGGTTGGAACCAAGGCCGGCC
31._RUQ_1543
AAAGGGGGGGTTGGAACCAAGGCCGGCC
32._GC-01-100-5-17
AAAAGGGGGGTTGGAACCAAGGCCAGCC
33._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
34._RUQ_191
AAAGGGGGGGTTGGAACCAAGGCCAGCC
35._RUQ_222
AAAAGGGGGGTTGGAACCAAGGCCGGCC
36._MITC-000615
AAAGGGGGGGTTGGAACCAAGGCCAGCC
37._MITC-000578
AAAGGGGGGGTTGGAACCAAGGCCAGCC
38._GC-01-73-4-9
AAAGGGGGGGTTGGAACCAAGGCCAGCC
39._RUQ_195
AAAAGGGGGGTTGGAACCAAGGCCGGCC
40._RUQ_768
AAAAGGGGGGTTGGAACCAAGGCCGGCC
41._RUQ_814
AAAGGGGGGGTTGGAACCAAGGCCAGCC
42._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
43._GC-01-94-5-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
44._GC-04-23-2-5
AAAAGGGGGGTTGGAACCAAGGCCGGCC
45._GC-01-75-4-11
AAAAGGGGGGTTGGAACCAAGGCCGGCC
46._RUQ_200
AAAAGGGGGGTTGGAACCAAGGCCGGCC
47._RUQ_1549
AAGGGGGGGGTTGGAACCAAGGCCAACC
48._MITC-000597
AAGGGGGGGGTTGGAACCAAGGCCAGCC
49._MITC-000379
AAGGGGGGGGTTGGAACCAAGGCCAACC
50._RUQ_1068
AAGGGGGGGGTTGGAACCAAGGCCAGCC
51._RUQ_1069
AAAAGGGGGGTTGGAACCAAGGCCGGCC
52._GC-01-95-5-12
AAGGGGGGGGTTGGAACCAAGGCCAGCC
53._GU_221_H_Fld#_162_Plt#_1
AAAGGGGGGGTTGGAACCAAGGCCGGCC
54._GC-01-74-4-10
AAAGGGGGGGTTGGAACCAAGGCCGGCC
 5758596061626364656667686970
_Input profile
ACGGGGGGGGAACCAAAACCAAAAAACC
1._GC-01-116-6-13
ACGGGGGGGGAACCAAAACCAAAAAACC
2._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
3._RUQ_188
ACGGGGGGGGAACCAAAACCAAAAAACC
4._RUQ_1370
ACGGGGGGAGAACCAAAACCAAAAAACC
5._MITC-000581
ACGGGGGGAGAACCAAAACCAAAAAACC
6._GC-08-172-4-15
CCGGGGGGGGAACCAAAACCAAAAAACC
7._GC-01-78-4-14
ACGGGGGGGGAACCAAAACCAAAAAACC
8._GC-01-73-4-9
ACGGGGGGGGAACCAAAACCAAAAAACC
9._GC-01-72-4-8
ACGGGGGGAGAACCAAAACCAAAAAACC
10._GC-01-76-4-12
ACGGGGGGGGAACCAAAACCAAAAAACC
11._GC-01-80-4-16
AAGGGGAGGGAACCAAAACCAAAAAACC
12._RUQ_771
ACGGGGGGAAAACCAAAACCAAAAAACC
13._GC-03-19-2-8
CCGGGGGGGGAACCAAAACCAAAAAACC
14._RUQ_1545
CCGGGGAGAAAACCAAAACCAAAAAACC
15._GC-01-138-7-17
CCGGGGGGAAAACCAAAACCAAAAAACC
16._GC-03-23-2-12
CCGGGGGGAGAACCAAAACCAAAAAACC
17._GC-08-266-8-38
ACGGGGGGAGAACCAAAAACAAAAAACC
18._RUQ_813
CCGGGGAGAGAACCAAAACCAAAAAACC
19._RUQ_1431
ACGGGGGGAGAACCAAAAACAAAAAACC
20._MITC-000612
ACGGGGGGAGAACCAAAAACAAAAAACC
21._RUQ_228
AAGGGGGGAAAACCAAAACCAAAAAACC
22._GC-08-268-8-40
CCGGGGGGGGAACCAAAAAAAAAAAACC
23._GC-08-052-1-63
CCGGGGGGAGAACCAAAAACAAAAAACC
24._RUQ_880
CCGGGGGGAAAACCAAAACCAAAAAACC
25._RUQ_815
CCGGGGGGGGAACCAAAAAAAAAAAACC
26._MITC-000403
CCGGGGGGAAAACCAAAACCAAAAAACC
27._MITC-000047
ACGGGGAGAAAACCAAAACCAAAAAACC
28._GU_185_Fld#_200_Plt#_1
ACGGGGAGAAAACCAAAACCAAAAAACC
29._GU-156B_Fld#_198_Plt#_2
CCGGGGGGAAAACCAAAACCAAAAAACC
30._GC-08-170-4-13
CCGGGGAGAGAACCAAAACCAAAAAACC
31._RUQ_1543
AAGGGGAGAAAACCAAAAACAAAAAACC
32._GC-01-100-5-17
CCGGGGGGAAAACCAAAACCAAAAAACC
33._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
34._RUQ_191
CCGGGGGGGGAACCAAAACCAAAAAACC
35._RUQ_222
CCGGGGGGAGAACCAAAAACAAAAAACC
36._MITC-000615
CCGGGGGGGGAACCAAAACCAAAAAACC
37._MITC-000578
CCGGGGGGGGAACCAAAACCAAAAAACC
38._GC-01-73-4-9
CCGGGGGGGGAACCAAAACCAAAAAACC
39._RUQ_195
CCGGGGGGGGAACCAAAAACAAAAAACC
40._RUQ_768
CCGGGGAGAGAACCAAAACCAAAAAACC
41._RUQ_814
AAGGGGGGGGAACCAAAAACAAAAAACC
42._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
43._GC-01-94-5-11
CCGGGGGGGGAACCAAAAACAAAAAACC
44._GC-04-23-2-5
ACGGGGGGAGAACCAAAAACAAAAAACC
45._GC-01-75-4-11
ACGGGGGGAGAACCAAAAAAAAAAAACC
46._RUQ_200
ACGGGGGGAGAACCAAAAAAAAAAAACC
47._RUQ_1549
CCGGGGAAAAAACCAAAACCAAAAAACC
48._MITC-000597
CCGGGGAAAAAACCAAAACCAAAAAACC
49._MITC-000379
CCGGGGAAAAAACCAAAACCAAAAAACC
50._RUQ_1068
CCGGGGAAAAAACCAAAACCAAAAAACC
51._RUQ_1069
AAGGGGGGAAAACCAAAAACAAAAAACC
52._GC-01-95-5-12
CCGGGGAAAAAACCAAAACCAAAAAACC
53._GU_221_H_Fld#_162_Plt#_1
CCGGGGGGAGAACCAAAAAAAAAAAACC
54._GC-01-74-4-10
CCGGGGGGAGAACCAAAAAAAAAAAACC
 717273747576777879808182  
_Input profile
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
1._GC-01-116-6-13
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
2._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
3._RUQ_188
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
4._RUQ_1370
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
5._MITC-000581
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
6._GC-08-172-4-15
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
7._GC-01-78-4-14
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
8._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
9._GC-01-72-4-8
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
10._GC-01-76-4-12
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
11._GC-01-80-4-16
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
12._RUQ_771
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
13._GC-03-19-2-8
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
14._RUQ_1545
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
15._GC-01-138-7-17
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
16._GC-03-23-2-12
GGCCGGGGGGCCGGGGGGAAGGGGX_XX_X
17._GC-08-266-8-38
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
18._RUQ_813
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
19._RUQ_1431
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
20._MITC-000612
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
21._RUQ_228
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
22._GC-08-268-8-40
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
23._GC-08-052-1-63
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
24._RUQ_880
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
25._RUQ_815
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
26._MITC-000403
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
27._MITC-000047
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
28._GU_185_Fld#_200_Plt#_1
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
29._GU-156B_Fld#_198_Plt#_2
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
30._GC-08-170-4-13
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
31._RUQ_1543
GGCCGGGGGGCCGGGGGGAAAGGGX_XX_X
32._GC-01-100-5-17
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
33._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
34._RUQ_191
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
35._RUQ_222
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
36._MITC-000615
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
37._MITC-000578
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
38._GC-01-73-4-9
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
39._RUQ_195
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
40._RUQ_768
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
41._RUQ_814
GGCCGGGGGGCCGGGGGGAAAAGGX_XX_X
42._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
43._GC-01-94-5-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
44._GC-04-23-2-5
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
45._GC-01-75-4-11
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
46._RUQ_200
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
47._RUQ_1549
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
48._MITC-000597
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
49._MITC-000379
GGCCGGGGGGCCGGGGGGAAGGAGX_XX_X
50._RUQ_1068
GGCCGGGGGGCCGGGGGGAAAGAGX_XX_X
51._RUQ_1069
GGCCGGGGGGCCGGGGGGAAGGAAX_XX_X
52._GC-01-95-5-12
GGCCGGGGGGCCGGGGGGAAAGAAX_XX_X
53._GU_221_H_Fld#_162_Plt#_1
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X
54._GC-01-74-4-10
GGCCGGGGGGCCGGGGGGAAAAAAX_XX_X

Input profile: GU_133_/C MITC-000670

 
USDA-SHRS, United States of America
 Mars, 2018

1._GU_133_/C GC-01-116-6-13

identical
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 13, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._GU_261 GC-01-72-4-8

97.6 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

3._GU_125_/C RUQ_188

97.6 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._GU_261_/P RUQ_1370

97.6 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

5._GU_261 MITC-000581

97.6 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

6._GU_151 GC-08-172-4-15

97.5 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 1, Rep: 15, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

7._GU_154_/C GC-01-78-4-14

97.5 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

8._GU_144_/C GC-01-73-4-9

97 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

9._GU_261 GC-01-72-4-8

96.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 8, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

10._GU_296_/H GC-01-76-4-12

96.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

11._GU_147_/H GC-01-80-4-16

96.9 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 16, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

12._GU_277_/G RUQ_771

96.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

13._GU_136_/H GC-03-19-2-8

96.3 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 8, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

14._GU_263_/V RUQ_1545

95.7 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

15._GU_125_/C GC-01-138-7-17

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 7, Rep: 17, Tree: 3
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

16._GU_168_/H GC-03-23-2-12

95.7 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 3, Block: 2, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._GU_241 GC-08-266-8-38

95.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._GU_114_/P RUQ_813

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

19._GU_241_/P RUQ_1431

95.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

20._GU_241_/P MITC-000612

95.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

21._GU_249_/H RUQ_228

95.1 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._GU_310 GC-08-268-8-40

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

23._GU_335 GC-08-052-1-63

94.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 63, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

24._CRU_156 RUQ_880

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

25._GU_310_/P RUQ_815

94.5 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

26._GU_156_B MITC-000403

94.5 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

27._GU_185_/G MITC-000047

94.5 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

28._GU_185 GU_185_Fld#_200_Plt#_1

94.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 200, Tree: 1
 Mars, 2018

29._GU_156_B GU-156B_Fld#_198_Plt#_2

94.5 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 198, Tree: 2
 Mars, 2018

30._GU_114 GC-08-170-4-13

94.4 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

31._GU_183_/G RUQ_1543

94.4 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

32._GU_175 GC-01-100-5-17

94.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 17, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

33._GU_144_/C GC-01-73-4-9

93.9 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

34._GU_144_/C RUQ_191

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

35._GU_147_/H RUQ_222

93.9 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

36._GU_144_/C MITC-000615

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

37._GU_144_/C MITC-000578

93.9 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

38._GU_144_/C GC-01-73-4-9

93.8 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

39._GU_171_/C RUQ_195

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

40._GU_219_/F RUQ_768

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

41._GU_243_/H RUQ_814

93.3 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

42._GU_171_/C GC-01-94-5-11

93.2 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

43._GU_171_/C GC-01-94-5-11

93.2 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 11, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

44._GU_353 GC-04-23-2-5

92.7 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 4, Block: 2, Rep: 5, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

45._GU_221_/C GC-01-75-4-11

92.1 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

46._GU_221_/C RUQ_200

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

47._GU_255_/V RUQ_1549

92.1 %
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

48._GU_123_/V MITC-000597

92.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

49._GU_255_/P MITC-000379

92.1 %
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

50._GU_123_/V RUQ_1068

92 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

51._GU_195_/V RUQ_1069

92 %
81 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

52._GU_123_/C GC-01-95-5-12

91.5 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 5, Rep: 12, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

53._GU_221_/H GU_221_H_Fld#_162_Plt#_1

90.2 %
82 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

54._GU_221_/H GC-01-74-4-10

90.1 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998