SNP Profiles matching GU 261 /P

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	TT	CC	GG	AG	TT	GG	TT	AA	GG	CC	TT	GG	CC
1._RUQ_222	AA	TT	CC	GG	AG	TT	GG	TT	AA	GG	CC	TT	GG	CC
2._RUQ_231	AA	TT	CC	GG	AG	TT	GG	TT	AA	GG	CC	TT	GG	CC
3._RUQ_188	AA	TT	CG	GG	AA	TT	GG	TT	AA	GG	CC	CT	GG	CC
4._RUQ_190	AA	TT	CG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC
5._RUQ_813	AA	TT	CC	GG	AG	TT	GG	TT	AA	GG	CC	TT	GG	CC
6._RUQ_771	AA	TT	CC	GG	AG	TT	GG	TT	AA	GG	CC	CT	GG	CC
7._RUQ_225	AA	TT	GG	GG	AA	TT	GG	TT	AA	TT	CC	TT	GG	CC
8._RUQ_890	AA	TT	CG	GG	AA	TT	GG	TT	AA	GG	CC	TT	GG	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CC	GG	CC	GG	GG	CT	AA	AA	TT	TT	AA	GG
1._RUQ_222	AA	CC	CC	GG	CC	GG	GG	CT	AA	AA	TT	TT	AA	GG
2._RUQ_231	AA	CT	CC	GG	CC	GG	GG	CC	AA	AA	TT	CT	AA	GG
3._RUQ_188	AA	CC	CC	AG	CC	GG	GG	CT	AA	AA	TT	TT	AA	GG
4._RUQ_190	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
5._RUQ_813	AA	CC	CC	AG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
6._RUQ_771	AA	CT	CC	AG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
7._RUQ_225	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG
8._RUQ_890	AA	CC	CC	AG	CC	GG	GG	CC	AA	AA	TT	TT	AA	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	AA	CC	GG	TT	CC	AC	TT	CC	AG	AA	CC	AA
1._RUQ_222	CC	CC	AA	CC	GG	TT	CC	AA	TT	CC	AG	AA	CC	AA
2._RUQ_231	CC	CC	AA	CC	GG	TT	CC	CC	TT	CC	AG	AA	CC	AA
3._RUQ_188	CC	CC	AG	CC	GG	CT	CC	AC	AT	CC	AG	AA	CC	AA
4._RUQ_190	CC	CC	AA	CC	AG	CT	CC	AC	AT	CC	AG	AA	CC	AC
5._RUQ_813	CC	CC	AA	CC	AG	CT	CC	CC	AT	CC	AG	AA	CT	CC
6._RUQ_771	CC	CC	AG	CC	AG	TT	CC	AC	TT	CC	AG	AA	CC	CC
7._RUQ_225	CC	CC	AA	CC	AG	TT	CC	CC	TT	CC	AA	AA	CC	AC
8._RUQ_890	CC	CC	AA	CC	AA	CC	CC	AA	AA	CC	AG	AA	CC	AA

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
1._RUQ_222	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
2._RUQ_231	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
3._RUQ_188	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
4._RUQ_190	CC	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
5._RUQ_813	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
6._RUQ_771	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
7._RUQ_225	CC	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC
8._RUQ_890	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG	CC

	57	58	59
_Input profile	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_222	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_231	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._RUQ_188	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._RUQ_190	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._RUQ_813	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._RUQ_771	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._RUQ_225	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._RUQ_890	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: GU_261_/P RUQ_1370

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

1._GU_147_/H RUQ_222

97.5 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

2._GU_341_/H RUQ_231

95.8 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

3._GU_125_/C RUQ_188

94.1 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

4._GU_133_/C RUQ_190

93.2 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

5._GU_114_/P RUQ_813

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

6._GU_277_/G RUQ_771

91.5 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

7._GU_207_/H RUQ_225

90.7 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

8._GU_265_/P RUQ_890

90.7 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

Key to SNP Markers

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1230	10	TcSNP1205
11	TcSNP1144	12	TcSNP1112	13	TcSNP1062	14	TcSNP1053	15	TcSNP1019
16	TcSNP1010	17	TcSNP999	18	TcSNP998	19	TcSNP945	20	TcSNP899
21	TcSNP872	22	TcSNP836	23	TcSNP835	24	TcSNP823	25	TcSNP800
26	TcSNP739	27	TcSNP731	28	TcSNP723	29	TcSNP702	30	TcSNP660
31	TcSNP645	32	TcSNP644	33	TcSNP642	34	TcSNP640	35	TcSNP602
36	TcSNP591	37	TcSNP589	38	TcSNP577	39	TcSNP546	40	TcSNP529
41	TcSNP522	42	TcSNP519	43	TcSNP421	44	TcSNP363	45	TcSNP329
46	TcSNP305	47	TcSNP290	48	TcSNP230	49	TcSNP194	50	TcSNP189
51	TcSNP176	52	TcSNP144	53	TcSNP143	54	TcSNP131	55	TcSNP52
56	TcSNP49	57	TcSNP33	58	TcSNP19	59	TcSNP13