SNP Profiles matching GU 123/V

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	TT	GG	GG	AA	TT	GG	TT	TT	AA	GG	CC	TT	GG
1._RUQ_203	AA	TT	GG	GG	AA	TT	GG	TT	TT	AA	GG	CC	TT	GG
2._RUQ_228B	AA	TT	GG	GG	AA	TT	GG	TT	__	AA	GG	CC	TT	GG
3._RUQ_1068	AA	TT	GG	GG	AA	TT	GG	TT	__	AA	__	CC	TT	GG
4._RUQ_190	AA	TT	CG	GG	AA	TT	GG	TT	TT	AA	GG	CC	TT	GG
5._RUQ_191	AA	TT	GG	GG	AA	TT	GG	TT	TT	AA	GG	CC	CT	GG
6._RUQ_200	AA	TT	GG	GG	AA	TT	GG	TT	__	AA	GT	CC	TT	GG
7._RUQ_200B	AA	TT	GG	GG	AA	TT	GG	TT	TT	AA	GT	CC	TT	GG
8._RUQ_815	AA	TT	GG	GG	AA	TT	GG	TT	__	AA	GG	CC	TT	GG
9._RUQ_188	AA	TT	CG	GG	AA	TT	GG	TT	TT	AA	GG	CC	CT	GG
10._RUQ_813	AA	TT	CC	GG	AG	TT	GG	TT	__	AA	GG	CC	TT	GG
11._RUQ_221	AA	TT	GG	GG	AA	TT	GG	TT	__	AA	GG	CC	TT	GG
12._RUQ_195	AA	TT	GG	GG	AA	__	GG	TT	__	AA	TT	CC	TT	GG
13._RUQ_1069	AA	TT	GG	GG	AA	TT	GG	TT	TT	AA	GG	CC	TT	GG
14._RUQ_225	AA	TT	GG	GG	AA	TT	GG	TT	TT	AA	TT	CC	TT	GG
15._RUQ_1070	AA	TT	GG	GG	AA	TT	GG	TT	TT	AA	TT	CC	TT	GG
16._RUQ_230	AA	TT	CG	GG	AA	TT	GG	TT	TT	AA	TT	CC	TT	GG
17._RUQ_231	AA	TT	CC	GG	AG	TT	GG	TT	TT	AA	GG	CC	TT	GG
18._RUQ_406	AA	TT	GG	GG	AA	TT	GG	TT	TT	AA	TT	CC	TT	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	CC	AA
1._RUQ_203	CC	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA
2._RUQ_228B	CC	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA
3._RUQ_1068	CC	AA	__	CC	__	CC	GG	GG	CC	AA	AA	TT	CT	AA
4._RUQ_190	CC	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA
5._RUQ_191	CT	AA	CT	CC	AA	CC	GG	GG	CT	AA	AA	TT	CT	AA
6._RUQ_200	CT	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA
7._RUQ_200B	CT	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA
8._RUQ_815	CT	AA	CT	CC	AA	CC	GG	GG	CT	AA	AA	TT	CT	AA
9._RUQ_188	CC	AA	CC	CC	AG	CC	GG	GG	CT	AA	AA	TT	TT	AA
10._RUQ_813	CC	AA	CC	CC	AG	CC	GG	GG	CC	AA	AA	TT	TT	AA
11._RUQ_221	CC	AA	TT	CC	AA	CC	GG	GG	CC	AA	AA	TT	TT	AA
12._RUQ_195	__	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	CT	AA
13._RUQ_1069	TT	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	CT	AA
14._RUQ_225	CC	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA
15._RUQ_1070	CT	AA	CC	CC	GG	CC	GG	GG	CC	AA	AA	TT	TT	AA
16._RUQ_230	CC	AA	CT	CC	GG	CC	GG	GG	CC	AA	AA	TT	CT	AA
17._RUQ_231	CC	AA	CT	CC	GG	CC	GG	GG	CC	AA	AA	TT	CT	AA
18._RUQ_406	TT	AA	CC	CC	AA	CC	GG	GG	CC	AA	AA	TT	CC	AA

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	GG	CC	CC	AA	CC	GG	CT	CC	CC	AT	CC	AG	AA	CC
1._RUQ_203	GG	CC	CC	AA	CC	GG	CT	CC	CC	AT	CC	AA	AA	CC
2._RUQ_228B	GG	CC	CC	AA	CC	GG	CT	CC	CC	AT	CC	AA	AA	CC
3._RUQ_1068	GG	CC	CC	AA	CC	GG	CC	CC	CC	AA	CC	AG	AA	TT
4._RUQ_190	GG	CC	CC	AA	CC	AG	CT	CC	AC	AT	CC	AG	AA	CC
5._RUQ_191	GG	CC	CC	AG	CC	GG	CT	CC	CC	AT	CC	AA	AA	CC
6._RUQ_200	GG	CC	CC	AA	CC	AG	CT	CC	AC	AT	CC	AG	AA	CT
7._RUQ_200B	GG	CC	__	AA	CC	AG	CT	CC	AC	AT	CC	AG	AA	CT
8._RUQ_815	GG	CC	CC	AA	CC	AA	CT	CC	CC	AT	CC	AA	AA	CC
9._RUQ_188	GG	CC	CC	AG	CC	GG	CT	CC	AC	AT	CC	AG	AA	CC
10._RUQ_813	GG	CC	CC	AA	CC	AG	CT	CC	CC	AT	CC	AG	AA	CT
11._RUQ_221	GG	CC	CC	AA	CC	GG	TT	CC	CC	TT	CC	GG	AA	CC
12._RUQ_195	GG	CC	CC	AA	CC	GG	CC	CC	CC	AA	CC	AA	__	CT
13._RUQ_1069	GG	CC	CC	AA	CC	AG	TT	CC	AA	TT	CC	AA	AA	CC
14._RUQ_225	GG	CC	CC	AA	CC	AG	TT	CC	CC	TT	CC	AA	AA	CC
15._RUQ_1070	GG	CC	CC	AA	CC	AG	CT	CC	CC	AT	CC	AA	AA	CC
16._RUQ_230	GG	CC	CC	AA	CC	GG	CT	CC	AC	AT	CC	AA	AA	CT
17._RUQ_231	GG	CC	CC	AA	CC	GG	TT	CC	CC	TT	CC	AG	AA	CC
18._RUQ_406	GG	CC	CC	AA	CC	GG	CC	CC	CC	AA	CC	AA	AA	CC

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	AC	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
1._RUQ_203	AC	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
2._RUQ_228B	AC	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
3._RUQ_1068	CC	TT	__	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
4._RUQ_190	AC	CC	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
5._RUQ_191	AA	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
6._RUQ_200	AC	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
7._RUQ_200B	AC	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
8._RUQ_815	CC	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
9._RUQ_188	AA	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
10._RUQ_813	CC	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
11._RUQ_221	AA	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
12._RUQ_195	CC	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
13._RUQ_1069	AA	TT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
14._RUQ_225	AC	CC	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
15._RUQ_1070	AC	TT	AA	AG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
16._RUQ_230	AC	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
17._RUQ_231	AA	CT	AA	GG	AA	CC	GG	GG	GG	CC	AA	AA	TT	GG
18._RUQ_406	AA	TT	AA	AA	AA	CC	GG	GG	GG	CC	CC	AA	TT	GG

	57	58	59	60
_Input profile	CC	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_203	CC	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_228B	CC	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._RUQ_1068	CC	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._RUQ_190	CC	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._RUQ_191	CC	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._RUQ_200	CC	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._RUQ_200B	CC	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._RUQ_815	CC	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._RUQ_188	CC	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._RUQ_813	CC	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._RUQ_221	CC	TT	AA	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._RUQ_195	CC	TT	AA	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._RUQ_1069	CC	TT	AA	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
14._RUQ_225	CC	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
15._RUQ_1070	CC	TT	AA	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
16._RUQ_230	CC	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
17._RUQ_231	CC	TT	AC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
18._RUQ_406	CC	TT	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: GU_123_/V RUQ_187

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

1._GU_259_/C RUQ_203

96.7 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

2._GU_249_/H RUQ_228B

96.6 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

3._GU_123_/V RUQ_1068

94.5 %
55 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

4._GU_133_/C RUQ_190

92.5 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

5._GU_144_/C RUQ_191

92.5 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

6._GU_221_/C RUQ_200

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

7._GU_221_/C RUQ_200B

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

8._GU_310_/P RUQ_815

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

9._GU_125_/C RUQ_188

91.7 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

10._GU_114_/P RUQ_813

91.5 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.997

11._GU_136_/H RUQ_221

91.5 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

12._GU_171_/C RUQ_195

90.2 %
56 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.996

13._GU_195_/V RUQ_1069

90 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

14._GU_207_/H RUQ_225

90 %
60 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

15._GU_226_/V RUQ_1070

90 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

16._GU_296_/H RUQ_230

90 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.993

17._GU_341_/H RUQ_231

90 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.998

18._KER_3 RUQ_406

90 %
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

GU
0.935

Key to SNP Markers

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1237	10	TcSNP1230
11	TcSNP1205	12	TcSNP1144	13	TcSNP1112	14	TcSNP1062	15	TcSNP1053
16	TcSNP1019	17	TcSNP1010	18	TcSNP999	19	TcSNP998	20	TcSNP945
21	TcSNP899	22	TcSNP872	23	TcSNP836	24	TcSNP835	25	TcSNP823
26	TcSNP800	27	TcSNP739	28	TcSNP731	29	TcSNP723	30	TcSNP702
31	TcSNP660	32	TcSNP645	33	TcSNP644	34	TcSNP642	35	TcSNP640
36	TcSNP602	37	TcSNP591	38	TcSNP589	39	TcSNP577	40	TcSNP546
41	TcSNP529	42	TcSNP522	43	TcSNP519	44	TcSNP421	45	TcSNP363
46	TcSNP329	47	TcSNP305	48	TcSNP290	49	TcSNP230	50	TcSNP194
51	TcSNP189	52	TcSNP176	53	TcSNP144	54	TcSNP143	55	TcSNP131
56	TcSNP52	57	TcSNP49	58	TcSNP33	59	TcSNP19	60	TcSNP13