SNP Profiles matching GU 123/V

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AATTGGGGAATTGGTTTTAAGGCCTTGG
1._GU_259_/C___
AATTGGGGAATTGGTTTTAAGGCCTTGG
2._GU_249_/H___
AATTGGGGAATTGGTT__AAGGCCTTGG
3._GU_123_/V___
AATTGGGGAATTGGTT__AA__CCTTGG
4._GU_133_/C___
AATTCGGGAATTGGTTTTAAGGCCTTGG
5._GU_144_/C___
AATTGGGGAATTGGTTTTAAGGCCCTGG
6._GU_221_/C___
AATTGGGGAATTGGTT__AAGTCCTTGG
7._GU_221_/C___
AATTGGGGAATTGGTTTTAAGTCCTTGG
8._GU_310_/P___
AATTGGGGAATTGGTT__AAGGCCTTGG
9._GU_125_/C___
AATTCGGGAATTGGTTTTAAGGCCCTGG
10._GU_114_/P___
AATTCCGGAGTTGGTT__AAGGCCTTGG
11._GU_136_/H___
AATTGGGGAATTGGTT__AAGGCCTTGG
12._GU_171_/C___
AATTGGGGAA__GGTT__AATTCCTTGG
13._GU_195_/V___
AATTGGGGAATTGGTTTTAAGGCCTTGG
14._GU_207_/H___
AATTGGGGAATTGGTTTTAATTCCTTGG
15._GU_226_/V___
AATTGGGGAATTGGTTTTAATTCCTTGG
16._GU_296_/H___
AATTCGGGAATTGGTTTTAATTCCTTGG
17._GU_341_/H___
AATTCCGGAGTTGGTTTTAAGGCCTTGG
18._KER_3___
AATTGGGGAATTGGTTTTAATTCCTTGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCAACCCCAACCGGGGCCAAAATTCCAA
1._GU_259_/C___
CCAACCCCAACCGGGGCCAAAATTTTAA
2._GU_249_/H___
CCAACCCCAACCGGGGCCAAAATTTTAA
3._GU_123_/V___
CCAA__CC__CCGGGGCCAAAATTCTAA
4._GU_133_/C___
CCAACCCCGGCCGGGGCCAAAATTTTAA
5._GU_144_/C___
CTAACTCCAACCGGGGCTAAAATTCTAA
6._GU_221_/C___
CTAACCCCAACCGGGGCCAAAATTTTAA
7._GU_221_/C___
CTAACCCCAACCGGGGCCAAAATTTTAA
8._GU_310_/P___
CTAACTCCAACCGGGGCTAAAATTCTAA
9._GU_125_/C___
CCAACCCCAGCCGGGGCTAAAATTTTAA
10._GU_114_/P___
CCAACCCCAGCCGGGGCCAAAATTTTAA
11._GU_136_/H___
CCAATTCCAACCGGGGCCAAAATTTTAA
12._GU_171_/C___
__AACCCCAACCGGGGCCAAAATTCTAA
13._GU_195_/V___
TTAACCCCAACCGGGGCCAAAATTCTAA
14._GU_207_/H___
CCAACCCCGGCCGGGGCCAAAATTTTAA
15._GU_226_/V___
CTAACCCCGGCCGGGGCCAAAATTTTAA
16._GU_296_/H___
CCAACTCCGGCCGGGGCCAAAATTCTAA
17._GU_341_/H___
CCAACTCCGGCCGGGGCCAAAATTCTAA
18._KER_3___
TTAACCCCAACCGGGGCCAAAATTCCAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
GGCCCCAACCGGCTCCCCATCCAGAACC
1._GU_259_/C___
GGCCCCAACCGGCTCCCCATCCAAAACC
2._GU_249_/H___
GGCCCCAACCGGCTCCCCATCCAAAACC
3._GU_123_/V___
GGCCCCAACCGGCCCCCCAACCAGAATT
4._GU_133_/C___
GGCCCCAACCAGCTCCACATCCAGAACC
5._GU_144_/C___
GGCCCCAGCCGGCTCCCCATCCAAAACC
6._GU_221_/C___
GGCCCCAACCAGCTCCACATCCAGAACT
7._GU_221_/C___
GGCC__AACCAGCTCCACATCCAGAACT
8._GU_310_/P___
GGCCCCAACCAACTCCCCATCCAAAACC
9._GU_125_/C___
GGCCCCAGCCGGCTCCACATCCAGAACC
10._GU_114_/P___
GGCCCCAACCAGCTCCCCATCCAGAACT
11._GU_136_/H___
GGCCCCAACCGGTTCCCCTTCCGGAACC
12._GU_171_/C___
GGCCCCAACCGGCCCCCCAACCAA__CT
13._GU_195_/V___
GGCCCCAACCAGTTCCAATTCCAAAACC
14._GU_207_/H___
GGCCCCAACCAGTTCCCCTTCCAAAACC
15._GU_226_/V___
GGCCCCAACCAGCTCCCCATCCAAAACC
16._GU_296_/H___
GGCCCCAACCGGCTCCACATCCAAAACT
17._GU_341_/H___
GGCCCCAACCGGTTCCCCTTCCAGAACC
18._KER_3___
GGCCCCAACCGGCCCCCCAACCAAAACC
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
ACTTAAGGAACCGGGGGGCCAAAATTGG
1._GU_259_/C___
ACTTAAGGAACCGGGGGGCCAAAATTGG
2._GU_249_/H___
ACTTAAGGAACCGGGGGGCCAAAATTGG
3._GU_123_/V___
CCTT__GGAACCGGGGGGCCAAAATTGG
4._GU_133_/C___
ACCCAAGGAACCGGGGGGCCAAAATTGG
5._GU_144_/C___
AACTAAGGAACCGGGGGGCCAAAATTGG
6._GU_221_/C___
ACCTAAGGAACCGGGGGGCCAAAATTGG
7._GU_221_/C___
ACCTAAGGAACCGGGGGGCCAAAATTGG
8._GU_310_/P___
CCTTAAGGAACCGGGGGGCCAAAATTGG
9._GU_125_/C___
AACTAAGGAACCGGGGGGCCAAAATTGG
10._GU_114_/P___
CCCTAAGGAACCGGGGGGCCAAAATTGG
11._GU_136_/H___
AATTAAGGAACCGGGGGGCCAAAATTGG
12._GU_171_/C___
CCCTAAGGAACCGGGGGGCCAAAATTGG
13._GU_195_/V___
AATTAAGGAACCGGGGGGCCAAAATTGG
14._GU_207_/H___
ACCCAAGGAACCGGGGGGCCAAAATTGG
15._GU_226_/V___
ACTTAAAGAACCGGGGGGCCAAAATTGG
16._GU_296_/H___
ACCTAAGGAACCGGGGGGCCAAAATTGG
17._GU_341_/H___
AACTAAGGAACCGGGGGGCCAAAATTGG
18._KER_3___
AATTAAAAAACCGGGGGGCCCCAATTGG
 57 58 59 60           
_Input profile
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._GU_259_/C___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._GU_249_/H___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._GU_123_/V___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._GU_133_/C___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._GU_144_/C___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._GU_221_/C___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._GU_221_/C___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._GU_310_/P___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._GU_125_/C___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._GU_114_/P___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
11._GU_136_/H___
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
12._GU_171_/C___
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
13._GU_195_/V___
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
14._GU_207_/H___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
15._GU_226_/V___
CCTTAATTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
16._GU_296_/H___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
17._GU_341_/H___
CCTTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
18._KER_3___
CCTTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_123_/V RUQ_187

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._GU_259_/C RUQ_203

96.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._GU_249_/H RUQ_228B

96.6 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

3._GU_123_/V RUQ_1068

94.5 %
55 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

4._GU_133_/C RUQ_190

92.5 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

5._GU_144_/C RUQ_191

92.5 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

6._GU_221_/C RUQ_200

92.4 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

7._GU_221_/C RUQ_200B

92.4 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

8._GU_310_/P RUQ_815

92.4 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

9._GU_125_/C RUQ_188

91.7 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

10._GU_114_/P RUQ_813

91.5 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

11._GU_136_/H RUQ_221

91.5 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

12._GU_171_/C RUQ_195

90.2 %
56 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

13._GU_195_/V RUQ_1069

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

14._GU_207_/H RUQ_225

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

15._GU_226_/V RUQ_1070

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

16._GU_296_/H RUQ_230

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

17._GU_341_/H RUQ_231

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

18._KER_3 RUQ_406

90 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1237 10TcSNP1230
11TcSNP1205 12TcSNP1144 13TcSNP1112 14TcSNP1062 15TcSNP1053
16TcSNP1019 17TcSNP1010 18TcSNP999 19TcSNP998 20TcSNP945
21TcSNP899 22TcSNP872 23TcSNP836 24TcSNP835 25TcSNP823
26TcSNP800 27TcSNP739 28TcSNP731 29TcSNP723 30TcSNP702
31TcSNP660 32TcSNP645 33TcSNP644 34TcSNP642 35TcSNP640
36TcSNP602 37TcSNP591 38TcSNP589 39TcSNP577 40TcSNP546
41TcSNP529 42TcSNP522 43TcSNP519 44TcSNP421 45TcSNP363
46TcSNP329 47TcSNP305 48TcSNP290 49TcSNP230 50TcSNP194
51TcSNP189 52TcSNP176 53TcSNP144 54TcSNP143 55TcSNP131
56TcSNP52 57TcSNP49 58TcSNP33 59TcSNP19 60TcSNP13