SNP Profiles matching SPEC 41 /6-18

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AATTGGTTAACCAACCAAGGGGTTTTTT
1._RUQ_843
AATTGGTTAACCAACCAAGGGGTTTTTT
2._RUQ_1695
AATTGGTTAACCAACCAAGGGGTTTTTT
3._RUQ_1588
AATTGGTTAACCGGCCAAAGGGTTTTTT
4._RUQ_1504
AATTGGTTAACCAGCCAAAGGGTTTTTT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGGGTTAACCAACCAAATCGCCTTCCGG
1._RUQ_843
GGGGTTAACCAACCAATTCCACTTCCGG
2._RUQ_1695
GGGGTTAACCAACCAATTCCACTTCCGG
3._RUQ_1588
GGGGTTAACCAACCAAATGGCCCTCCGG
4._RUQ_1504
GGGGTTAACCAACCAAAAGGCCCTCCGG
 29 30 31 32 33 34 35 36 37 38     
_Input profile
AAAAGGCCCCTTGGCCCCTTX_XX_XX_XX_X
1._RUQ_843
AAAAGGCCCCTTGGCCCCTTX_XX_XX_XX_X
2._RUQ_1695
AAAAGGCCCCTTGGCCCCTTX_XX_XX_XX_X
3._RUQ_1588
AAAAGGCCCCTTGGCCACCTX_XX_XX_XX_X
4._RUQ_1504
AA__GGCCCCTTGGCCACCTX_XX_XX_XX_X

Input profile: SPEC_41_/6-18 RUQ_1325

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._APA_4 RUQ_843

96.1 %
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._APA_5 RUQ_1695

96.1 %
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

3._NA_710 RUQ_1588

90.8 %
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

4._NA_232 RUQ_1504

90.5 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1404 4TcSNP1253 5TcSNP1230
6TcSNP1144 7TcSNP1062 8TcSNP1053 9TcSNP1019 10TcSNP998
11TcSNP872 12TcSNP836 13TcSNP800 14TcSNP739 15TcSNP731
16TcSNP723 17TcSNP702 18TcSNP645 19TcSNP644 20TcSNP642
21TcSNP602 22TcSNP591 23TcSNP589 24TcSNP577 25TcSNP529
26TcSNP522 27TcSNP421 28TcSNP329 29TcSNP305 30TcSNP230
31TcSNP189 32TcSNP176 33TcSNP144 34TcSNP131 35TcSNP52
36TcSNP49 37TcSNP19 38TcSNP13