SNP Profiles of GU-114   View Data

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 Key

 1234567891011121314
_Input profile
AACCCCGGGGTTCCCCCCGGTTCCTTAA
1._GC-08-170-4-13
AACCCCGGGGTTCCCCCCGGTTCCTTAA
2._GC-08-170-4-13
AACCCCGGGGTTCCCCCCGGTTCCTTAA
3._GC-08-170-4-13
AACCCCGGGGTTCCCCCCGGTTCCTTAA
4._GC-08-170-4-13
AACCCCGGGGTTCCCCCCGGTTCCTTAA
5._GC-08-170-4-13
AACCCCGGGGTTCCCCCCGGTTCCTTAA
6._GC-08-170-4-13
AACCCCGGGGTTCCCCCCGGTTCCTTAA
7._GC-08-170-4-13
AA__CCGGGG__GGGG__GGAAGGAATT
 1516171819202122232425262728
_Input profile
CCGGCCGGTTAATTGGAAAACCGGAATT
1._GC-08-170-4-13
CCGGCCGGTTAATTGGAAAACCGGAATT
2._GC-08-170-4-13
CCGGCCGGTTAATTGGAAAACCGGAATT
3._GC-08-170-4-13
CCGGCCGGTTAATTGGAAAACCGGAATT
4._GC-08-170-4-13
CCGGCC__TTAATTGGAAAACCGGAATT
5._GC-08-170-4-13
CCGGCCGGTTAATTGGAAAACCGGAATT
6._GC-08-170-4-13
CCGGCCGGTTAATTGGAAAACCGGAATT
7._GC-08-170-4-13
CCCC__GGAAAGAAGGAAAAGGCCAAAA
 2930313233343536373839404142
_Input profile
TTGGCCCCAGTTGGGGGGCCGGCCGGTT
1._GC-08-170-4-13
TTGGCCCCAGTTGGGGGGCCGGCCGGTT
2._GC-08-170-4-13
TTGGCCCCAGTTGGGGGGCCGGCCGGTT
3._GC-08-170-4-13
TTGGCCCCAGTTGGGGGGCCGGCCGGTT
4._GC-08-170-4-13
TTGGCCCCAGTTGGGGGGCCGGCCGGTT
5._GC-08-170-4-13
TTGGCCCC__TTGGGGGGCCGGCCGGTT
6._GC-08-170-4-13
TTGGCCCCAGTTGGGGGGCCGGCCGGTT
7._GC-08-170-4-13
AAGGCCCCAGAA__CCGGGGGGGGCC__
 4344454647484950515253545556
_Input profile
TTAAGGAACCCCGGGGTTTTTTCCTTGG
1._GC-08-170-4-13
TTAAGGAACCCCGGGGTTTTTTCCTTGG
2._GC-08-170-4-13
TTAAGGAACCCCGGGGTTTTTTCCTTGG
3._GC-08-170-4-13
TTAAGGAACCCCGGGGTTTT__CCTTGG
4._GC-08-170-4-13
TTAAGGAACCCCGGGGTTTTTTCCTTGG
5._GC-08-170-4-13
TTAAGGAACCCCGGGGTTTTTTCCTTGG
6._GC-08-170-4-13
TTAAGGAACCCCGG__TTTTTTCCTTGG
7._GC-08-170-4-13
AA__GGAAGG__GGGGAAAGAAGGAAGG
 5758596061626364656667686970
_Input profile
CCCCCCAAGGGGAAGGGGGGAACCCCAG
1._GC-08-170-4-13
CCCCCCAAGGGGAAGGGGGGAACCCCAG
2._GC-08-170-4-13
CCCCCCAAGGGGAAGGGGGGAACCCCAG
3._GC-08-170-4-13
CCCCCCAAGGGGAAGGGGGGAACCCCAG
4._GC-08-170-4-13
CCCCCCAAGGGGAAGGGGGGAACCCCAG
5._GC-08-170-4-13
CCCCCCAAGGGGAAGGGGGGAACCCCAG
6._GC-08-170-4-13
CCCCCCAAGGGGAAGGGGGGAACCCCAG
7._GC-08-170-4-13
GGGGGGAAGGGGAAGGCCCCAA______
 7172737475767778798081828384
_Input profile
CCAAGGCCCCGGAACCCCTTAACTCCCC
1._GC-08-170-4-13
CCAAGGCCCCGGAACCCCTTAACTCCCC
2._GC-08-170-4-13
CCAAGGCCCCGGAACCCCTTAACTCCCC
3._GC-08-170-4-13
CCAAGGCCCCGGAACCCCTTAACTCCCC
4._GC-08-170-4-13
CCAAGGCCCCGGAACCCCTTAACTCCCC
5._GC-08-170-4-13
CCAAGGCCCCGGAACCCCTTAACTCCCC
6._GC-08-170-4-13
CCAAGGCCCCGGAA__CCTTAACTCCCC
7._GC-08-170-4-13
GGAAGGCCCC__AAGGGGTTAAAGGG__
 8586878889909192      
_Input profile
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
1._GC-08-170-4-13
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
2._GC-08-170-4-13
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
3._GC-08-170-4-13
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
4._GC-08-170-4-13
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
5._GC-08-170-4-13
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
6._GC-08-170-4-13
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
7._GC-08-170-4-13
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X

Input profile: GU_114 GC-08-170-4-13

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

1._GU_114 GC-08-170-4-13

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

2._GU_114 GC-08-170-4-13

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

3._GU_114 GC-08-170-4-13

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

4._GU_114 GC-08-170-4-13

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

5._GU_114 GC-08-170-4-13

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

6._GU_114 GC-08-170-4-13

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

7._GU_114 GC-08-170-4-13

47.4 %
77 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP836 17TcSNP878 18TcSNP929 19TcSNP413 20TcSNP653
21TcSNP1149 22TcSNP174 23TcSNP32 24TcSNP372 25TcSNP448
26TcSNP872 27TcSNP953 28TcSNP1034 29TcSNP1175 30TcSNP1111
31TcSNP577 32TcSNP90 33TcSNP998 34TcSNP150 35TcSNP28
36TcSNP751 37TcSNP1484 38TcSNP602 39TcSNP561 40TcSNP894
41TcSNP1063 42TcSNP1126 43TcSNP1270 44TcSNP606 45TcSNP329
46TcSNP689 47TcSNP944 48TcSNP1242 49TcSNP1383 50TcSNP547
51TcSNP776 52TcSNP1309 53TcSNP151 54TcSNP1520 55TcSNP799
56TcSNP899 57TcSNP226 58TcSNP1439 59TcSNP1442 60TcSNP193
61TcSNP25 62TcSNP364 63TcSNP144 64TcSNP230 65TcSNP560
66TcSNP723 67TcSNP731 68TcSNP701 69TcSNP1041 70TcSNP645
71TcSNP917 72Tcm003s01336581 73Tcm003s07402719 74Tcm001s00947643 75Tcm006s26664133
76Tcm002s20575712 77TcSNP529 78TcSNP1458 79TcSNP60 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1253 90TcSNP1414
91TcSNP154 92TcSNP240