SNP Profiles of GU-114   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCCCGGGGTTCCCCCCGGTTCCTTAA
1._GU_114___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
2._GU_114___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
3._GU_114___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
4._GU_114___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
5._GU_114___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
6._GU_114___
AACCCCGGGGTTCCCCCCGGTTCCTTAA
7._GU_114___
AA__CCGGGG__GGGG__GGAAGGAATT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCGGGGCCGGTTAATTGGAAAACCGGAA
1._GU_114___
CCGGGGCCGGTTAATTGGAAAACCGGAA
2._GU_114___
CCGGGGCCGGTTAATTGGAAAACCGGAA
3._GU_114___
CCGGGGCCGGTTAATTGGAAAACCGGAA
4._GU_114___
CCGGGGCC__TTAATTGGAAAACCGGAA
5._GU_114___
CC__GGCCGGTTAATTGGAAAACCGGAA
6._GU_114___
CCGGGGCCGGTTAATTGGAAAACCGGAA
7._GU_114___
CCGGCC__GGAAAGAAGGAAAAGGCCAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTTTGGCCCCTTGGGGGGCCGGCCGGTT
1._GU_114___
TTTTGGCCCCTTGGGGGGCCGGCCGGTT
2._GU_114___
TTTTGGCCCCTTGGGGGGCCGGCCGGTT
3._GU_114___
TTTTGGCCCCTTGGGGGGCCGGCCGGTT
4._GU_114___
TTTTGGCCCCTTGGGGGGCCGGCCGGTT
5._GU_114___
TTTTGGCCCCTTGGGGGGCCGGCCGGTT
6._GU_114___
TTTTGGCCCCTTGGGGGGCCGGCCGGTT
7._GU_114___
AAAAGGCCCCAA__CCGGGGGGGGCC__
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
TTAAGGAACCCCGGGGTTTTTTCCTTGG
1._GU_114___
TTAAGGAACCCCGGGGTTTTTTCCTTGG
2._GU_114___
TTAAGGAACCCCGGGGTTTTTTCCTTGG
3._GU_114___
TTAAGGAACCCCGGGGTTTT__CCTTGG
4._GU_114___
TTAAGGAACCCCGGGGTTTTTTCCTTGG
5._GU_114___
TTAAGGAACCCCGGGGTTTTTTCCTTGG
6._GU_114___
TTAAGGAACCCCGG__TTTTTTCCTTGG
7._GU_114___
AA__GGAAGG__GGGGAAAGAAGGAAGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCCCCCAAGGGGAAGGGGGGAACCCCAG
1._GU_114___
CCCCCCAAGGGGAAGGGGGGAACCCCAG
2._GU_114___
CCCCCCAAGGGGAAGGGGGGAACCCCAG
3._GU_114___
CCCCCCAAGGGGAAGGGGGGAACCCCAG
4._GU_114___
CCCCCCAAGGGGAAGGGGGGAACCCCAG
5._GU_114___
CCCCCCAAGGGGAAGGGGGGAACCCCAG
6._GU_114___
CCCCCCAAGGGGAAGGGGGGAACCCCAG
7._GU_114___
GGGGGGAAGGGGAAGGCCCCAA______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCAAGGCCCCGGAACCCCTTAACTCCCC
1._GU_114___
CCAAGGCCCCGGAACCCCTTAACTCCCC
2._GU_114___
CCAAGGCCCCGGAACCCCTTAACTCCCC
3._GU_114___
CCAAGGCCCCGGAACCCCTTAACTCCCC
4._GU_114___
CCAAGGCCCCGGAACCCCTTAACTCCCC
5._GU_114___
CCAAGGCCCCGGAACCCCTTAACTCCCC
6._GU_114___
CCAAGGCCCCGGAA__CCTTAACTCCCC
7._GU_114___
GGAAGGCCCC__AAGGGGTTAAAGGG__
 85 86 87 88 89 90 91 92       
_Input profile
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
1._GU_114___
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
2._GU_114___
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
3._GU_114___
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
4._GU_114___
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
5._GU_114___
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
6._GU_114___
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
7._GU_114___
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X

Input profile: GU_114 GC-08-170-4-13

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

1._GU_114 GC-08-170-4-13

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

2._GU_114 GC-08-170-4-13

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

3._GU_114 GC-08-170-4-13

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

4._GU_114 GC-08-170-4-13

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

5._GU_114 GC-08-170-4-13

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

6._GU_114 GC-08-170-4-13

identical
90 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

7._GU_114 GC-08-170-4-13

47.4 %
77 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP1062 17TcSNP836 18TcSNP878 19TcSNP929 20TcSNP413
21TcSNP653 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP150 35TcSNP28
36TcSNP751 37TcSNP1484 38TcSNP602 39TcSNP561 40TcSNP894
41TcSNP1063 42TcSNP1126 43TcSNP1270 44TcSNP606 45TcSNP329
46TcSNP689 47TcSNP944 48TcSNP1242 49TcSNP1383 50TcSNP547
51TcSNP776 52TcSNP1309 53TcSNP151 54TcSNP1520 55TcSNP799
56TcSNP899 57TcSNP226 58TcSNP1439 59TcSNP1442 60TcSNP193
61TcSNP25 62TcSNP364 63TcSNP144 64TcSNP230 65TcSNP560
66TcSNP723 67TcSNP731 68TcSNP701 69TcSNP1041 70TcSNP645
71TcSNP917 72Tcm003s01336581 73Tcm003s07402719 74Tcm001s00947643 75Tcm006s26664133
76Tcm002s20575712 77TcSNP529 78TcSNP1458 79TcSNP60 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1253 90TcSNP1414
91TcSNP154 92TcSNP240