SNP Profiles of PA 137 [PER]   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
AAACCTCCGGAGCCCCCCCCGGTTCCTT
1._GC-05-009-1-09
AAACCTCCGGAGCCCCCCCCGGTTCCTT
2._GC-05-009-1-09
AAACCTCCGGAGCCCCCCCCGGTTCCTT
3._GC-05-009-1-09
AAACCTCCGGAGCCCCCCCCGGTTCCTT
4._GC-05-117-3-19
AAACCTCCGGAGCCCCCCCCGGTTCCTT
5._GC-05-117-3-19
AAACCTCCGGAGCCCCCCCCGGTTCCTT
6._GC-05-117-3-19
AAACCTCCGGAGCCCCCCCCGGTTCCTT
7._GC-05-117-3-19
AAACCTCCGGAGCCCCCCCCGGTTCCTT
8._GC-05-117-3-19
AAACCTCCGGAGCCCCCCCCGGTTCCTT
9._GC-05-009-1-09
AAACCTCCGGAGCCCCCCCCGG__CCTT
10._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
11._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
12._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
13._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
14._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
15._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
16._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
17._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
18._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
19._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
20._RUQ_1081
____CTCC____CC__CC____TTCC__
21._RUQ_1081
AAACCTCC________CCCCGG__CC__
22._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
23._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
24._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
25._RUQ_36
AAACCTCC________CCCCGG__CC__
26._RUQ_1081
AAACCTCC________CCCCGG__CC__
27._RUQ_36
____CT__________________CC__
28._PA_137_[PER]
AAACCTCC________CCCCGG__CC__
29._RUQ_1081
______CC____CC______________
30._RUQ_36
______CC____CC______________
31._RUQ_36
AAACCT____________CCGG__CC__
32._PA137[PER]
______CC________CC______CC__
33._RUQ_36
AAAC__CCGGAG__GGGG__GGAAGGAA
34._MITC-000400
AAAC__CCGGAG__GGGG__GGAAGGAA
35._PA_137_[PER]_Fld#_201_Plt#_2
AAAC__CCGGAG__GGGG__GGAAGGAA
 1516171819202122232425262728
_Input profile
AAAAGGCGCCCGCCAATTGGATAACCGG
1._GC-05-009-1-09
AAAAGGCGCCCGCCAATTGGATAACCGG
2._GC-05-009-1-09
AAAAGGCGCCCGCCAATTGGATAACCGG
3._GC-05-009-1-09
AAAAGGCGCCCGCCAATTGGATAACCGG
4._GC-05-117-3-19
AAAAGGCGCCCGCCAATTGGATAACCGG
5._GC-05-117-3-19
AAAAGGCGCCCGCCAATTGGATAACCGG
6._GC-05-117-3-19
AAAAGGCGCCCGCCAATTGGATAACCGG
7._GC-05-117-3-19
AAAAGGCGCCCGCCAATTGGATAACCGG
8._GC-05-117-3-19
AAAAGGCGCCCGCCAATTGGATAACCGG
9._GC-05-009-1-09
AAAAGGCGCCCGCCAATTGGATAACCGG
10._PA_137_[PER]
____GG____CG________ATAA__GG
11._PA_137_[PER]
____GG____CG________ATAA__GG
12._PA_137_[PER]
____GG____CG________ATAA__GG
13._PA_137_[PER]
____GG____CG________ATAA__GG
14._PA_137_[PER]
____GG____CG________ATAA__GG
15._PA_137_[PER]
____GG____CG________ATAA__GG
16._PA_137_[PER]
____GG____CG________ATAA__GG
17._PA_137_[PER]
____GG____CG________ATAA__GG
18._PA_137_[PER]
____GG____CG________ATAA__GG
19._PA_137_[PER]
____GG____CG________ATAA__GG
20._RUQ_1081
________CC________GG__AACCGG
21._RUQ_1081
____GG____CG________ATAA__GG
22._PA_137_[PER]
____GG____CG________ATAA__GG
23._PA_137_[PER]
____GG____CG________ATAA__GG
24._PA_137_[PER]
____GG____CG________ATAA__GG
25._RUQ_36
____GG____CG________ATAA__GG
26._RUQ_1081
____GG____CG________ATAA__GG
27._RUQ_36
______________________AACC__
28._PA_137_[PER]
____GGTTCCCG________ATAA__GG
29._RUQ_1081
____GGTT__________________GG
30._RUQ_36
____GGTT__________________GG
31._RUQ_36
____GG____CG________ATAA____
32._PA137[PER]
__AG____GG__CC____GG__AACCCC
33._RUQ_36
TTAGGGCG__CGGGAGAAGGATAAGGCC
34._MITC-000400
TTAGGGCG__CGGGAGAAGGATAAGGCC
35._PA_137_[PER]_Fld#_201_Plt#_2
TTAGGGCG__CGGGAGAAGGATAAGGCC
 2930313233343536373839404142
_Input profile
AATTGTGGCGCCAGGTGGGTGGTTAGCC
1._GC-05-009-1-09
AATTGTGGCGCCAGGTGGGTGGTTAGCC
2._GC-05-009-1-09
AATTGTGGCGCCAGGTGGGTGGTTAGCC
3._GC-05-009-1-09
AATTGTGGCGCCAGGTGGGTGGTTAGCC
4._GC-05-117-3-19
AATTGTGGCGCCAGGTGGGTGGTTAGCC
5._GC-05-117-3-19
AATTGTGGCGCCAGGTGGGTGGTTAGCC
6._GC-05-117-3-19
AATTGTGGCGCCAGGTGGGTGGTTAGCC
7._GC-05-117-3-19
AATTGTGGCGCCAGGTGGGTGGTTAGCC
8._GC-05-117-3-19
AATTGTGGCGCCAGGTGGGTGGTTAGCC
9._GC-05-009-1-09
AATTGTGGCGCCAGGTGGGTGGTTAGCC
10._PA_137_[PER]
AA______CG__AGGT____GG______
11._PA_137_[PER]
AA______CG__AGGT____GG______
12._PA_137_[PER]
AA______CG__AGGT____GG______
13._PA_137_[PER]
AA______CG__AGGT____GG______
14._PA_137_[PER]
AA______CG__AGGT____GG______
15._PA_137_[PER]
AA______CG__AGGT____GG______
16._PA_137_[PER]
AA______CG__AGGT____GG______
17._PA_137_[PER]
AA______CG__AGGT____GG______
18._PA_137_[PER]
AA______CG__AGGT____GG______
19._PA_137_[PER]
AA______CG__AGGT____GG______
20._RUQ_1081
______GGCGCCAGGT____GGTT____
21._RUQ_1081
AA______CG__AGGT____GG______
22._PA_137_[PER]
AA______CG__AGGT____GG______
23._PA_137_[PER]
AA______CG__AGGT____GG______
24._PA_137_[PER]
AA______CG__AGGT____GG______
25._RUQ_36
AA______CG__AGGT____GG______
26._RUQ_1081
AA______CG__AGGT____GG______
27._RUQ_36
______GGCGCCAGGT____________
28._PA_137_[PER]
AA______CG__AGGT____GG______
29._RUQ_1081
________CG__AG________TT____
30._RUQ_36
________CG__AG________TT____
31._RUQ_36
AA______CG__AGGT____AG______
32._PA137[PER]
______GGCG________GT__TT____
33._RUQ_36
AAAAACGGCGCCAGACCCACGGAAAGGG
34._MITC-000400
AAAAACGGCGCCAGACCCACGGAAAGGG
35._PA_137_[PER]_Fld#_201_Plt#_2
AAAAACGGCGCCAGACCCACGGAAAGGG
 4344454647484950515253545556
_Input profile
GGTTCTAAGGAACCCCGGGGGGCTCCTT
1._GC-05-009-1-09
GGTTCTAAGGAACCCCGGGGGGCTCCTT
2._GC-05-009-1-09
GGTTCTAAGGAACCCCGGGGGGCTCCTT
3._GC-05-009-1-09
GGTTCTAAGGAACCCCGGGGGGCTCCTT
4._GC-05-117-3-19
GGTTCTAAGGAACCCCGGGGGGCTCCTT
5._GC-05-117-3-19
GGTTCTAAGGAACCCCGGGGGGCTCCTT
6._GC-05-117-3-19
GGTTCTAAGGAACCCCGGGGGGCTCCTT
7._GC-05-117-3-19
GGTTCTAAGGAACCCCGGGGGGCTCCTT
8._GC-05-117-3-19
GGTTCTAAGGAACCCCGGGGGGCTCCTT
9._GC-05-009-1-09
GGTTCTAAGGAACCCCGGGGGGCTCCTT
10._PA_137_[PER]
____CT________________CTCC__
11._PA_137_[PER]
____CT________________CTCC__
12._PA_137_[PER]
____CT________________CTCC__
13._PA_137_[PER]
____CT________________CTCC__
14._PA_137_[PER]
____CT________________CTCC__
15._PA_137_[PER]
____CT________________CTCC__
16._PA_137_[PER]
____CT________________CTCC__
17._PA_137_[PER]
____CT________________CTCC__
18._PA_137_[PER]
____CT________________CTCC__
19._PA_137_[PER]
____CT________________CTCC__
20._RUQ_1081
GGTT____GG____________CT__TT
21._RUQ_1081
____CT________________CTCC__
22._PA_137_[PER]
____CT________________CTCC__
23._PA_137_[PER]
____CT________________CTCC__
24._PA_137_[PER]
____CT________________CTCC__
25._RUQ_36
____CT________________CTCC__
26._RUQ_1081
____CT________________CTCC__
27._RUQ_36
GGTT________________________
28._PA_137_[PER]
____CT________________CTCC__
29._RUQ_1081
________GG__________________
30._RUQ_36
________GG__________________
31._RUQ_36
____CT________________CTCC__
32._PA137[PER]
__TT__AA______________CT____
33._RUQ_36
CC__AG__GGAAGG__GGGGCCAGGGAA
34._MITC-000400
CC__AG__GGAAGG__GGGGCCAGGGAA
35._PA_137_[PER]_Fld#_201_Plt#_2
CC__AG__GGAAGG__GGGGCCAGGGAA
 5758596061626364656667686970
_Input profile
GGCCCCCTAAGGGGACAGGGGGGGCCCC
1._GC-05-009-1-09
GGCCCCCTAAGGGGACAGGGGGGGCCCC
2._GC-05-009-1-09
GGCCCCCTAAGGGGACAGGGGGGGCCCC
3._GC-05-009-1-09
GGCCCCCTAAGGGGACAGGGGGGGCCCC
4._GC-05-117-3-19
GGCCCCCTAAGGGGACAGGGGGGGCCCC
5._GC-05-117-3-19
GGCCCCCTAAGGGGACAGGGGGGGCCCC
6._GC-05-117-3-19
GGCCCCCTAAGGGGACAGGGGGGGCCCC
7._GC-05-117-3-19
GGCCCCCTAAGGGGACAGGGGGGGCCCC
8._GC-05-117-3-19
GGCCCCCTAAGGGGACAGGGGGGGCCCC
9._GC-05-009-1-09
GGCCCCCTAAGGGGACAGGGGGGGCCCC
10._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
11._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
12._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
13._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
14._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
15._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
16._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
17._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
18._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
19._PA_137_[PER]
__CC__CTAAGG__ACAGGGGG______
20._RUQ_1081
__CCCCCTAC__GGACAGGGGGGG____
21._RUQ_1081
__CC__CTACGG__ACAGGGGG______
22._PA_137_[PER]
__CC__CTACGG__ACAGGGGG______
23._PA_137_[PER]
______CTACGG__ACAGGGGG______
24._PA_137_[PER]
______CTACGG__ACAGGGGG______
25._RUQ_36
__CC__CTACGG__ACAGGGGG______
26._RUQ_1081
__CC__CTACGG__ACAGGGGG______
27._RUQ_36
GG____CTAC____ACAGGGGG______
28._PA_137_[PER]
______CTACGG__ACAGGG________
29._RUQ_1081
GG____________ACAG__GGGG____
30._RUQ_36
GG____________ACAG__GGGG____
31._RUQ_36
__CG__CTACGG__ACAGGGGT______
32._PA137[PER]
__GGCC__AC__GGACAG________CC
33._RUQ_36
GGGGGGAGACGGGGACAGCCCCGG____
34._MITC-000400
GGGGGGAGACGGGGACAGCCCCGG____
35._PA_137_[PER]_Fld#_201_Plt#_2
GGGGGGAGACGGGGACAGCCCCGG____
 7172737475767778798081828384
_Input profile
AGCTCCAAAAAAGGACCCCCATAATTCT
1._GC-05-009-1-09
AGCTCCAAAAAAGGACCCCCATAATTCT
2._GC-05-009-1-09
AGCTCCAAAAAAGGACCCCCATAATTCT
3._GC-05-009-1-09
AGCTCCAAAAAAGGACCCCCATAATTCT
4._GC-05-117-3-19
AGCTCCAAAAAAGGACCCCCATAATTCT
5._GC-05-117-3-19
AGCTCCAAAAAAGGACCCCCATAATTCT
6._GC-05-117-3-19
AGCTCCAAAAAAGGACCCCCATAATTCT
7._GC-05-117-3-19
AGCTCCAAAAAAGGACCCCCATAATTCT
8._GC-05-117-3-19
AGCTCCAAAAAAGGACCCCCATAATTCT
9._GC-05-009-1-09
AGCTCCAAAAAAGGACCCCCATAATTCT
10._PA_137_[PER]
AGCT__________ACCC______TTCT
11._PA_137_[PER]
AGCT__________ACCC______TTCT
12._PA_137_[PER]
AGCT__________ACCC______TTCT
13._PA_137_[PER]
AGCT__________ACCC______TTCT
14._PA_137_[PER]
AGCT__________ACCC______TTCT
15._PA_137_[PER]
AGCT__________ACCC______TTCT
16._PA_137_[PER]
AGCT__________ACCC______TTCT
17._PA_137_[PER]
AGCT__________ACCC______TTCT
18._PA_137_[PER]
AGCT__________ACCC______TTCT
19._PA_137_[PER]
AGCT__________ACCC______TTCT
20._RUQ_1081
______________ACCC____AATT__
21._RUQ_1081
AACT__________ACCC______TTCT
22._PA_137_[PER]
AACT__________ACCC______TTCT
23._PA_137_[PER]
AACT__________ACCC______TTCT
24._PA_137_[PER]
AACT__________ACCC______TTCT
25._RUQ_36
AACT__________ACCC______CTCT
26._RUQ_1081
AACT__________ACCC______CTCT
27._RUQ_36
______________AC____________
28._PA_137_[PER]
AACT__________ACCC______TTCT
29._RUQ_1081
AA____________ACCC____AA____
30._RUQ_36
AA____________AACC____AA____
31._RUQ_36
AACT__________ACCG______TTCT
32._PA137[PER]
________________GG________CT
33._RUQ_36
__AGCCAAAAAA__ACGGGGATAAAAAG
34._MITC-000400
__AGCCAAAAAA__ACGGGGATAAAAAG
35._PA_137_[PER]_Fld#_201_Plt#_2
__AGCCAAAAAA__ACGGGGATAAAAAG
 858687888990919293     
_Input profile
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
1._GC-05-009-1-09
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
2._GC-05-009-1-09
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
3._GC-05-009-1-09
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
4._GC-05-117-3-19
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
5._GC-05-117-3-19
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
6._GC-05-117-3-19
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
7._GC-05-117-3-19
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
8._GC-05-117-3-19
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
9._GC-05-009-1-09
CCCCAGTTCCTTTTAAGGX_XX_XX_XX_XX_X
10._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
11._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
12._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
13._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
14._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
15._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
16._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
17._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
18._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
19._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
20._RUQ_1081
____AGTTCCTT______X_XX_XX_XX_XX_X
21._RUQ_1081
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
22._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
23._PA_137_[PER]
____AG__CCTTTT____X_XX_XX_XX_XX_X
24._PA_137_[PER]
____AG__CCTTTT____X_XX_XX_XX_XX_X
25._RUQ_36
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
26._RUQ_1081
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
27._RUQ_36
____AGCT__________X_XX_XX_XX_XX_X
28._PA_137_[PER]
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
29._RUQ_1081
CC____TT__TT______X_XX_XX_XX_XX_X
30._RUQ_36
CC____TT__TT______X_XX_XX_XX_XX_X
31._RUQ_36
____AG____GTTT____X_XX_XX_XX_XX_X
32._PA137[PER]
__________________X_XX_XX_XX_XX_X
33._RUQ_36
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
34._MITC-000400
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
35._PA_137_[PER]_Fld#_201_Plt#_2
__GG____GGAAAATTGGX_XX_XX_XX_XX_X

Input profile: PA_137_[PER] GC-05-009-1-09

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

1._PA_137_[PER] GC-05-009-1-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._PA_137_[PER] GC-05-009-1-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

3._PA_137_[PER] GC-05-009-1-09

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

4._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP3
 Mars, 2018

5._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

6._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

7._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

8._PA_137_[PER] GC-05-117-3-19

identical
93 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._PA_137_[PER] GC-05-009-1-09

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 3
 Dapeng Zhang, 2016

11._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

12._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 4
 Dapeng Zhang, 2016

13._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 5
 Dapeng Zhang, 2016

14._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 1 > FP
 Dapeng Zhang, 2016

15._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5109 3 > FP
 Dapeng Zhang, 2016

16._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 2
 Dapeng Zhang, 2016

17._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 4
 Dapeng Zhang, 2016

18._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 5
 Dapeng Zhang, 2016

19._PA_137_[PER]

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5319 1 > FP
 Dapeng Zhang, 2016

20._PA_137_[PER] RUQ_1081

98.8 %
41 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

21._PA_137_[PER] RUQ_1081

97.5 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

22._PA_137_[PER]

97.5 %
40 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: Plot 1 - Row 7 C0181 28
 Dapeng Zhang, 2016

23._PA_137_[PER]

97.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D430
 Dapeng Zhang, 2016

24._PA_137_[PER]

97.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5A D274 T1
 Dapeng Zhang, 2016

25._PA_137_[PER] RUQ_36

96.3 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

26._PA_137_[PER] RUQ_1081

96.3 %
40 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

27._PA_137_[PER] RUQ_36

95.2 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

28._PA_137_[PER]

95 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 5A D274 T1
 Dapeng Zhang, 2014

29._PA_137_[PER] RUQ_1081

92.9 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

30._PA_137_[PER] RUQ_36

90.5 %
21 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

31._PA_137_[PER] RUQ_36

90 %
35 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

32._PA_137_[PER] PA137[PER]

80.8 %
26 shared markers

Center for Forestry Research and Technology Transfer, Vietnam
Location: CEFORTT
 Jocelyn De Wever et al., 2019

33._PA_137_[PER] RUQ_36

48.7 %
79 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._PA_137_[PER] MITC-000400

48.7 %
79 shared markers

USDA-SHRS, United States of America
 Mars, 2018

35._PA_137_[PER] PA_137_[PER]_Fld#_201_Plt#_2

48.7 %
79 shared markers

USDA-TARS, United States of America
Location: Field: 201, Tree: 2
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP860 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP151 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240