SNP Profiles of GU 221 /H   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
AACCCCGGGGCTCCCCCCGGTTCCTTAA
1._GC-01-074-4-10
AACCCCGGGGCTCCCCCCGGTTCCTTAA
2._GC-01-074-4-10
AACCCCGGGGCTCCCCCCGGTTCCTTAA
3._GC-01-074-4-10
AACCCCGGGGCTCCCCCCGGTTCCTTAA
4._GC-01-074-4-10
AACCCCGGGGCTCCCCCCGGTTCCTTAA
5._GC-01-074-4-10
AACCCCGGGGCTCCCCCCGGTTCCTTAA
6._GC-01-074-4-10
AACCCCGGGGCTCCCCCCGGTTCCTTAA
7._GU_221_/H
AACCCC________CCCCGG__CC____
8._GU_221_/H
AACCCC________CCCCGG__CC____
9._GU_221_/H
AACCCC________CCCCGG__CC____
10._GU_221_/H
AACCCC________CCCCGG__CC____
11._GU_221_/H
AACCCC________CCCCGG__CC____
12._GU_221_/H
AACCCC________CCCCGG__CC____
13._GU_221_/H
AACCCC________CCCCGG__CC____
14._GC-01-074-4-10
ATCCCCAAAACTTTCCTTGGTTTTTTAA
15._GU_221_/H
ATCCCC________CCTTGG__TT____
16._GC-01-74-4-10
AA__CCGGGG__GGGG__GGAAGGAATT
17._GU_221_H_Fld#_162_Plt#_1
AA__CCGGGG__GGGG__GGAAGGAATT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCGGCCGGCTAATTGGAAAACCGGAATT
1._GC-01-074-4-10
CCGGCCGGCTAATTGGAAAACCGGAATT
2._GC-01-074-4-10
CCGGCCGGCTAATTGGAAAACCGGAATT
3._GC-01-074-4-10
CCGGCCGGCTAATTGGAAAACCGGAATT
4._GC-01-074-4-10
CCGGCCGGCTAATTGGAAAACCGGAATT
5._GC-01-074-4-10
CCGGCCGGCTAATTGGAAAACCGGAATT
6._GC-01-074-4-10
CCGGCCGGCTAATTGGAAAACCGGAATT
7._GU_221_/H
__GG__GG________AAAA__GGAA__
8._GU_221_/H
__GG__GG________AAAA__GGAA__
9._GU_221_/H
__GG__GG________AAAA__GGAA__
10._GU_221_/H
__GG__GG________AAAA__GGAA__
11._GU_221_/H
__GG__GG________AAAA__GGAA__
12._GU_221_/H
__GG__GG________AAAA__GGAA__
13._GU_221_/H
__GG__GG________AAAA__GGAA__
14._GC-01-074-4-10
AAGGGGCGCCAACCGGAAAAGGCCTTTT
15._GU_221_/H
__GG__CG________AAAA__CCTT__
16._GC-01-74-4-10
CCGG__GGAGAGAAGGAAAAGGCCAAAA
17._GU_221_H_Fld#_162_Plt#_1
CCGG__GGAGAGAAGGAAAAGGCCAAAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTGGCCCCAATTGGTTAGCCGGCCGGTT
1._GC-01-074-4-10
TTGGCCCCAATTGGTTAGCCGGCCGGTT
2._GC-01-074-4-10
TTGGCCCCAATTGGTTAGCCGGCCGGTT
3._GC-01-074-4-10
TTGGCCCCAATTGGTTAGCCGGCCGGTT
4._GC-01-074-4-10
TTGGCCCCAATTGGTTAGCCGGCCGGTT
5._GC-01-074-4-10
TTGGCCCCAATTGGTTAGCCGGCCGGTT
6._GC-01-074-4-10
TTGGCCCCAATTGGTTAGCCGGCCGGTT
7._GU_221_/H
____CC__AATT____AG__________
8._GU_221_/H
____CC__AATT____AG__________
9._GU_221_/H
____CC__AATT____AG__________
10._GU_221_/H
____CC__AATT____AG__________
11._GU_221_/H
____CC__AATT____AG__________
12._GU_221_/H
____CC__AATT____AG__________
13._GU_221_/H
____CC__AATT____AG__________
14._GC-01-074-4-10
TTAAGGCCAAGGTTTTAGCCGGCGGGTT
15._GU_221_/H
____GG__AAGG____AG__________
16._GC-01-74-4-10
AAGGCCCCAAAACCAAAGGGGGGGCC__
17._GU_221_H_Fld#_162_Plt#_1
AAGGCCCCAAAACCAAAGGGGGGGCC__
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
TTAAAGAACCCCGGGGTTTTTTCCTTGG
1._GC-01-074-4-10
TTAAAGAACCCCGGGGTTTTTTCCTTGG
2._GC-01-074-4-10
TTAAAGAACCCCGGGGTTTTTTCCTTGG
3._GC-01-074-4-10
TTAAAGAACCCCGGGGTTTTTTCCTTGG
4._GC-01-074-4-10
TTAAAGAACCCCGGGGTTTTTTCCTTGG
5._GC-01-074-4-10
TTAAAGAACCCCGGGGTTTTTTCCTTGG
6._GC-01-074-4-10
TTAAAGAACCCCGGGGTT__TTCCTTGG
7._GU_221_/H
TT__________________TTCC____
8._GU_221_/H
TT__________________TTCC____
9._GU_221_/H
TT__________________TTCC____
10._GU_221_/H
TT__________________TTCC____
11._GU_221_/H
TT__________________TTCC____
12._GU_221_/H
TT__________________TTCC____
13._GU_221_/H
TT__________________TTCC____
14._GC-01-074-4-10
TTGGAAAACCACAGAATTTTTTCCTTGG
15._GU_221_/H
TT__________________TTCC____
16._GC-01-74-4-10
AA__AGAAGG__GGGGAAAGAAGGAAGG
17._GU_221_H_Fld#_162_Plt#_1
AA__AGAAGG__GGGGAAAGAAGGAAGG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCCCCCAAGGGGAAGGGGGGAACCCCAG
1._GC-01-074-4-10
CCCCCCAAGGGGAAGGGGGGAACCCCAG
2._GC-01-074-4-10
CCCCCCAAGGGGAAGGGGGGAACCCCAG
3._GC-01-074-4-10
CCCCCCAAGGGGAAGGGGGGAACCCCAG
4._GC-01-074-4-10
CCCCCCAAGGGGAAGGGGGGAACCCCAG
5._GC-01-074-4-10
CCCCCCAAGGGGAAGGGGGGAACCCCAG
6._GC-01-074-4-10
CCCCCCAAGGGGAAGGGGGGAACCCCAG
7._GU_221_/H
CC__CCAAGG__AAGGGGGG______AG
8._GU_221_/H
CC__CCAAGG__AAGGGGGG______AG
9._GU_221_/H
CC__CCAAGG__AAGGGGGG______AG
10._GU_221_/H
CC__CCAAGG__AAGGGGGG______AG
11._GU_221_/H
CC__CCAAGG__AAGGGGGG______AG
12._GU_221_/H
CC__CCAAGG__AAGGGGGG______AG
13._GU_221_/H
CC__CCAAGG__AAGGGGGG______AG
14._GC-01-074-4-10
CGCCCCCCGGGGACGGGGGGAACTCGAA
15._GU_221_/H
CG__CCCCGG__ACGGGGGG______AA
16._GC-01-74-4-10
GGGGGGAAGGGGAAGGCCCCAA______
17._GU_221_H_Fld#_162_Plt#_1
GGGGGGAAGGGGAAGGCCCCAA______
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
CCAAAGCCCCGGAAGGCCTTAACCTTCC
1._GC-01-074-4-10
CCAAAGCCCCGGAAGGCCTTAACCTTCC
2._GC-01-074-4-10
CCAAAGCCCCGGAAGGCCTTAACCTTCC
3._GC-01-074-4-10
CCAAAGCCCCGGAAGGCCTTAACCTTCC
4._GC-01-074-4-10
CCAAAGCCCCGGAAGGCCTTAACCTTCC
5._GC-01-074-4-10
CCAAAGCCCCGGAAGGCCTTAACCTTCC
6._GC-01-074-4-10
CCAAAGCCCCGGAAGGCCTTAACCTTCC
7._GU_221_/H
CC__________AAGG______CCTTCC
8._GU_221_/H
CC__________AAGG______CCTTCC
9._GU_221_/H
CC__________AAGG______CCTTCC
10._GU_221_/H
CC__________AAGG______CCTTCC
11._GU_221_/H
CC__________AAGG______CCTTCC
12._GU_221_/H
CC__________AAGG______CCTTCC
13._GU_221_/H
CC__________AAGG______CCTTCC
14._GC-01-074-4-10
CTCCGGCCCCGGACCCCCAACCTTCCCC
15._GU_221_/H
CT__________ACCC______TTCCCC
16._GC-01-74-4-10
GGAAAGCCCC__AACCGGTTAAGGAA__
17._GU_221_H_Fld#_162_Plt#_1
GGAAAGCCCC__AACCGGTTAAGGAA__
 85 86 87 88 89 90 91 92       
_Input profile
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
1._GC-01-074-4-10
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
2._GC-01-074-4-10
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
3._GC-01-074-4-10
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
4._GC-01-074-4-10
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
5._GC-01-074-4-10
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
6._GC-01-074-4-10
CCAGCCCCTTTTAAGGX_XX_XX_XX_XX_XX_X
7._GU_221_/H
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
8._GU_221_/H
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
9._GU_221_/H
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
10._GU_221_/H
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
11._GU_221_/H
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
12._GU_221_/H
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
13._GU_221_/H
__AG__CCTTTT____X_XX_XX_XX_XX_XX_X
14._GC-01-074-4-10
CCGGCCTTGTTTTTGGX_XX_XX_XX_XX_XX_X
15._GU_221_/H
__GG__TTGTTT____X_XX_XX_XX_XX_XX_X
16._GC-01-74-4-10
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X
17._GU_221_H_Fld#_162_Plt#_1
GG____GGAAAATTGGX_XX_XX_XX_XX_XX_X

Input profile: GU_221_/H GC-01-074-4-10

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

1._GU_221_/H GC-01-074-4-10

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

2._GU_221_/H GC-01-074-4-10

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

3._GU_221_/H GC-01-074-4-10

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP4
 Mars, 2018

4._GU_221_/H GC-01-074-4-10

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

5._GU_221_/H GC-01-074-4-10

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

6._GU_221_/H GC-01-074-4-10

identical
91 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018

7._GU_221_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 6
 Dapeng Zhang, 2016

8._GU_221_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 9
 Dapeng Zhang, 2016

9._GU_221_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 15
 Dapeng Zhang, 2016

10._GU_221_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 16
 Dapeng Zhang, 2016

11._GU_221_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 1 > FP
 Dapeng Zhang, 2016

12._GU_221_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 12 > F
 Dapeng Zhang, 2016

13._GU_221_/H

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 14 > F
 Dapeng Zhang, 2016

14._GU_221_/H GC-01-074-4-10

62.5 %
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

15._GU_221_/H

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 4 > FP
 Dapeng Zhang, 2016

16._GU_221_/H GC-01-74-4-10

48.1 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._GU_221_/H GU_221_H_Fld#_162_Plt#_1

48.1 %
78 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP1062 17TcSNP878 18TcSNP929 19TcSNP413 20TcSNP653
21TcSNP1149 22TcSNP174 23TcSNP32 24TcSNP372 25TcSNP448
26TcSNP872 27TcSNP953 28TcSNP1034 29TcSNP1175 30TcSNP1111
31TcSNP577 32TcSNP90 33TcSNP998 34TcSNP150 35TcSNP28
36TcSNP751 37TcSNP1484 38TcSNP602 39TcSNP561 40TcSNP894
41TcSNP1063 42TcSNP1126 43TcSNP1270 44TcSNP606 45TcSNP329
46TcSNP689 47TcSNP944 48TcSNP1242 49TcSNP1383 50TcSNP547
51TcSNP776 52TcSNP1309 53TcSNP151 54TcSNP1520 55TcSNP799
56TcSNP899 57TcSNP226 58TcSNP1439 59TcSNP1442 60TcSNP193
61TcSNP25 62TcSNP364 63TcSNP144 64TcSNP230 65TcSNP560
66TcSNP723 67TcSNP731 68TcSNP701 69TcSNP1041 70TcSNP645
71TcSNP917 72Tcm003s01336581 73Tcm003s07402719 74Tcm001s00947643 75Tcm006s26664133
76Tcm002s20575712 77TcSNP529 78TcSNP1458 79TcSNP60 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1253 90TcSNP1414
91TcSNP154 92TcSNP240