SNP Profiles of C SUL 7   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCGGCGTTCTCCGGCTCCAAAGCTAACC
1._C_SUL_7___
CCGGCGTTCTCCGGCTCCAAAGCTAACC
2._C_SUL_7___
CCGGCGTTCTCCGGCTCCAAAGCTAACC
3._C_SUL_7___
CCGGCGTTCTCCGGCTCCAAAGCTAACC
4._C_SUL_7___
CCGGCGTTCTCCGGCTCCAAAGCTAACC
5._C_SUL_7___
CCGGCGTTCTCCGGCTCCAAAGCTAACC
6._C_SUL_7___
CCGGCGTTCTCCGGCTCCAAAGCTAACC
7._C_SUL_7___
CCGGCGTTCTCCGGCTCCAAAGCTAACC
8._C_SUL_7___
CCGGCGTTCTCCGGCTCCAAAGCTAACC
9._C_SUL_7___
CCGGCGTTCTCCGGCTCCAAAGCTAACC
10._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAACC
11._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAACC
12._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAACC
13._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAACC
14._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAACC
15._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAACC
16._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAACC
17._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAACC
18._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAACC
19._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAA__
20._C_SUL_7___
CCAACCCTCCTTGGCTCCAAGGCCAA__
21._C_SUL_7___
CTAGCGCTCTCTGTCTCTATAGCCAGTT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
ATCGCTCTCGGGAGCTACCCGGCTACGG
1._C_SUL_7___
ATCGCTCTCGGGAGCTACCCGGCTACGG
2._C_SUL_7___
ATCGCTCTCGGGAGCTACCCGGCTACGG
3._C_SUL_7___
ATCGCTCTCGGGAGCTACCCGGCTACGG
4._C_SUL_7___
ATCGCTCTCGGGAGCTACCCGGCTACGG
5._C_SUL_7___
ATCGCTCTCGGGAGCTACCCGGCTACGG
6._C_SUL_7___
ATCGCTCTCGGGAGCTACCCGGCTACGG
7._C_SUL_7___
ATCGCTCTCGGGAGCTACCCGGCTACGG
8._C_SUL_7___
ATCGCTCTCGGGAGCTACCCGGCTACGG
9._C_SUL_7___
ATCGCTCTCGGGAGCTACCCGGCTACGG
10._C_SUL_7___
ATGGCTTTCGGTAGCCCCCCGGCCACGG
11._C_SUL_7___
ATGGCTTTCGGTAACCCCCCGGCCACGG
12._C_SUL_7___
ATGGCTTTCGGTAACCCCCCGGCCACGG
13._C_SUL_7___
ATGGCTTTCGGTAACCCCCCGGCCACGG
14._C_SUL_7___
ATGGCTTTCGGTAACCCCCCGGCCACGG
15._C_SUL_7___
ATGGCTTTCGGTAACCCCCCGGCCACGG
16._C_SUL_7___
ATGGCTTTCGGTAACCCCCCGGCCACGG
17._C_SUL_7___
ATGGCTTTCGGTAACCCCCCGGCCACGG
18._C_SUL_7___
ATGGCTTTCGGTAACCCCCCGGCCACGG
19._C_SUL_7___
ATGG__TTCGGTAACCCCCCGGCCACGG
20._C_SUL_7___
ATGG__TTCGGTAACCCCCCGGCCACGG
21._C_SUL_7___
ATGGCTCTGGGGAGTTCCCGGTCTACAG
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
GGAACTAACGACTTGGACATCGX_XX_XX_X
1._C_SUL_7___
GGAACTAACGACTTGGACATCGX_XX_XX_X
2._C_SUL_7___
GGAACTAACGACTTGGACATCGX_XX_XX_X
3._C_SUL_7___
GGAACTAACGACTTGGACATCGX_XX_XX_X
4._C_SUL_7___
GGAACTAACGACTTGGACATCGX_XX_XX_X
5._C_SUL_7___
GGAACTAACGACTTGGACATCGX_XX_XX_X
6._C_SUL_7___
GGAACTAACGACTTGGACATCGX_XX_XX_X
7._C_SUL_7___
GGAACTAACGACTTGGACATCGX_XX_XX_X
8._C_SUL_7___
GGAACTAACG__TTGGACATCGX_XX_XX_X
9._C_SUL_7___
GGAACTAACG__TTGGACATCGX_XX_XX_X
10._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
11._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
12._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
13._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
14._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
15._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
16._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
17._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
18._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
19._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
20._C_SUL_7___
GGAACTAACGCCTTGGACAAGGX_XX_XX_X
21._C_SUL_7___
GGATCCAACGCCCTGTCCATCGX_XX_XX_X

Input profile: C_SUL_7

 
Mars Center for Cocoa Science, Brazil
Location: 8829 7
 Dapeng Zhang, 2016

1._C_SUL_7

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8829 4
 Dapeng Zhang, 2016

2._C_SUL_7 GC-08-261-8-29

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

3._C_SUL_7 GC-08-261-8-29

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

4._C_SUL_7 GC-08-261-8-29

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

5._C_SUL_7 GC-08-261-8-29

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

6._C_SUL_7

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8829 3
 Dapeng Zhang, 2016

7._C_SUL_7

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8829 5
 Dapeng Zhang, 2016

8._C_SUL_7 GC-08-261-8-29

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

9._C_SUL_7

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8829 2
 Dapeng Zhang, 2016

10._C_SUL_7

76.9 %
39 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P95 583
 Dapeng Zhang, 2016

11._C_SUL_7 NA

75.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

12._C_SUL_7 NA

75.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

13._C_SUL_7 NA

75.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

14._C_SUL_7 NA

75.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

15._C_SUL_7

75.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8129 1
 Dapeng Zhang, 2016

16._C_SUL_7

75.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8129 5
 Dapeng Zhang, 2016

17._C_SUL_7

75.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8129 6
 Dapeng Zhang, 2016

18._C_SUL_7

75.6 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8129 7
 Dapeng Zhang, 2016

19._C_SUL_7 NA

74.3 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

20._C_SUL_7

74.3 %
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8129 3
 Dapeng Zhang, 2016

21._C_SUL_7

69.2 %
39 shared markers

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica
Location: Cabiria
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25