SNP Profiles of CL 9 /11   View Data

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 Key

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_Input profile
CTAGCGCTCTCTGGCTCTATAGAATTAT
1._CL_9_/11
CTAGCGCTCTCTGGCTCTATAGAATTAT
2._CL_9_/11
CTAGCGCTCTCTGGCTCTATAGAATTAT
3._CL_9_/11
CTAGCGCTCTCTGGCTCTATAGAATTAT
4._CL_9_/11
CTAGCGCTCTCTGGCTCTATAGAATTAT
5._GC-08-151-3-50
CTAGCGCTCTCTGGCTCTATAGAATTAT
6._GC-08-151-3-50
CTAGCGCTCTCTGGCTCTATAGAATTAT
7._GC-08-151-3-50
CTAGCGCTCTCTGGCTCTATAGAATTAT
8._GC-08-151-3-50
CTAGCGCTCTCTGGCTCTATAGAATTAT
9._GC-08-151-3-50
CTAGCGCTCTCTGGCTCTATAGAATTAT
10._CL_9_/11
CTAGCCCCTTCTGTTTCCATGGGGTTAT
 1516171819202122232425262728
_Input profile
GGCTCTGGGGAGTTCCCGGGCTACGGAG
1._CL_9_/11
GGCTCTGGGGAGTTCCCGGGCTACGGAG
2._CL_9_/11
GGCTCTGGGGAGTTCCCGGGCTACGGAG
3._CL_9_/11
GGCTCTGGGGAGTTCCCGGGCTACGGAG
4._CL_9_/11
GGCTCTGGGGAGTTCCCGGGCTACGGAG
5._GC-08-151-3-50
GGCTCTGGGGAGTTCCCGGGCTACGGAG
6._GC-08-151-3-50
GGCTCTGGGGAGTTCCCGGGCTACGGAG
7._GC-08-151-3-50
GGCTCTGGGGAGTTCCCGGGCTACGGAG
8._GC-08-151-3-50
GGCTCTGGGGAGTTCCCGGGCTACGGAG
9._GC-08-151-3-50
GGCTCTGGGGAGTTCCCGGGCTACGGAG
10._CL_9_/11
GGCTCTGGTTGGTTCCCCGGCCAAGGGG
 293031323334353637     
_Input profile
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
1._CL_9_/11
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
2._CL_9_/11
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
3._CL_9_/11
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
4._CL_9_/11
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
5._GC-08-151-3-50
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
6._GC-08-151-3-50
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
7._GC-08-151-3-50
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
8._GC-08-151-3-50
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
9._GC-08-151-3-50
CCAACCCCCTGGCCAACGX_XX_XX_XX_XX_X
10._CL_9_/11
CCAGCCCCCCTTCCAAGGX_XX_XX_XX_XX_X

Input profile: CL_9_/11

 
Mars Center for Cocoa Science, Brazil
Location: 8350 1
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

1._CL_9_/11

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8350 11
 Dapeng Zhang, 2016

2._CL_9_/11

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8350 9
 Dapeng Zhang, 2016

3._CL_9_/11

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8350 7
 Dapeng Zhang, 2016

4._CL_9_/11

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8350 4
 Dapeng Zhang, 2016

5._CL_9_/11 GC-08-151-3-50

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

6._CL_9_/11 GC-08-151-3-50

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

7._CL_9_/11 GC-08-151-3-50

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

8._CL_9_/11 GC-08-151-3-50

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

9._CL_9_/11 GC-08-151-3-50

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

10._CL_9_/11

71.6 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper C 520
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP998 13TcSNP994 14TcSNP953 15TcSNP929
16TcSNP917 17TcSNP891 18TcSNP872 19TcSNP723 20TcSNP645
21TcSNP619 22TcSNP591 23TcSNP577 24TcSNP560 25TcSNP534
26TcSNP529 27TcSNP469 28TcSNP429 29TcSNP242 30TcSNP230
31TcSNP226 32TcSNP193 33TcSNP151 34TcSNP150 35TcSNP144
36TcSNP32 37TcSNP25