SNP Profiles of POUND 25 /A   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAACGTTTTACTTGTCCCCAAGGCCAG
1._POUND_25_/A
CCAACCTTTTAATTTTCC__AAAGCCGG
2._POUND_25_/A
CCAACCCCCCAATTGGTTTTAAGGCTAA
3._POUND_25_/A
CCAACCCCCCAATTGGTTTTAAGGCTAA
4._POUND_25_/A
CCAACCCCCCAATTGGTTTTAAGGCTAA
5._POUND_25_/A
CCAACCCCCCAATTGGTTTTAAGGCTAA
6._GC-08-086-2-09
CCAACCCCCCAATTGGTTTTAAGGCTAA
7._GC-08-086-2-09
CCAACCCCCCAATTGGTTTTAAGGCTAA
8._GC-08-086-2-09
CCAACCCCCCAATTGGTTTTAAGGCTAA
9._GC-08-086-2-09
CCAACCCCCCAATTGGTTTTAAGGCTAA
10._Pound_25/A_[POU]_Fld#_151A_Plt#_1
GGAACGAAAAACAAAA____AAGGGGAG
11._GC-08-86-2-9
GGAA__GGGGAAAACC____AAGGAGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTAAGGCCCCCGGTAACCAAGGGGCTCC
1._POUND_25_/A
TTAAGGCCCCGGGGAACCAAGGGGTTCC
2._POUND_25_/A
CCAACGCTTTGGGGAACCCCGGGGCCAC
3._POUND_25_/A
CCAACGCTTTGGGGAACCCCGGGGCCAC
4._POUND_25_/A
CCAACGCTTTGGGGAACCCCGGGGCCAC
5._POUND_25_/A
CCAACGCTTTGGGGAACCCCGGGGCCAC
6._GC-08-086-2-09
CCAACGCTTTGGGGAACCCCGGGGCCAC
7._GC-08-086-2-09
CCAACGCTTTGGGGAACCCCGGGGCCAC
8._GC-08-086-2-09
CCAACGCTTTGGGGAACCCCGGGGCCAC
9._GC-08-086-2-09
CCAACGCTTTGGGGAACCCCGGGGCCAC
10._Pound_25/A_[POU]_Fld#_151A_Plt#_1
AAAAGGGGGGCGAC__GGAACGCC__CC
11._GC-08-86-2-9
GGAACGAGAACCCC__GGCCGGCC__AC
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AAGGAACTGGCGACCCTTCCTTGGX_XX_X
1._POUND_25_/A
AAGGAACCAA__AACCGGCCTTGGX_XX_X
2._POUND_25_/A
AAGGAACTAAGGCCCCGGACAAGGX_XX_X
3._POUND_25_/A
AAGGAACTAAGGCCCCGGACAAGGX_XX_X
4._POUND_25_/A
AAGGAACTAAGGCCCCGGACAAGGX_XX_X
5._POUND_25_/A
AAGGAACTAAGGCCCCGGACAAGGX_XX_X
6._GC-08-086-2-09
AAGGAACTAAGGCCCCGGACAAGGX_XX_X
7._GC-08-086-2-09
AAGGAACTAAGGCCCCGGACAAGGX_XX_X
8._GC-08-086-2-09
AAGGAACTAAGGCCCCGGACAAGGX_XX_X
9._GC-08-086-2-09
AAGGAACTAAGGCCCCGGACAAGGX_XX_X
10._Pound_25/A_[POU]_Fld#_151A_Plt#_1
__GGAAAGGG__ACGGACCCTTGGX_XX_X
11._GC-08-86-2-9
__GGAAAGAACCCCGGCCACAAGGX_XX_X

Input profile: POUND_25_/A

 
 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F452 T9
 Dapeng Zhang, 2016

1._POUND_25_/A

81.6 %
38 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F406 T5
 Dapeng Zhang, 2016

2._POUND_25_/A

57.5 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8209 1 > FP
 Dapeng Zhang, 2016

3._POUND_25_/A

57.5 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8209 2 > FP
 Dapeng Zhang, 2016

4._POUND_25_/A

57.5 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8209 3 > FP
 Dapeng Zhang, 2016

5._POUND_25_/A

57.5 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8209 4 > FP
 Dapeng Zhang, 2016

6._POUND_25_/A GC-08-086-2-09

57.5 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

7._POUND_25_/A GC-08-086-2-09

57.5 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP3
 Mars, 2018

8._POUND_25_/A GC-08-086-2-09

57.5 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

9._POUND_25_/A GC-08-086-2-09

57.5 %
40 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP1
 Mars, 2018

10._POUND_25_/A Pound_25/A_[POU]_Fld#_151A_Plt#_1

54.4 %
34 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 151A, Tree: 1
 Mars, 2018

11._POUND_25_/A GC-08-86-2-9

35.3 %
34 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1 > FP2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25