SNP Profiles of EET 19   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CTAGCGCTCTAACTGTCTCTATAGCCAG
1._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
2._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
3._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
4._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
5._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
6._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
7._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
8._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
9._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
10._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
11._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
12._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
13._JA_6_/2_[POU]___
CCGGCCCTCTACCTGTCTCC__AACCAA
14._JA_6_/2_[POU]___
CCGGCCCTCT__CTGTCTCCTTAACCAA
15._JA_6_/2_[POU]___
CCGGCCCTCTCCCTGTCTCCATAACCAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTATGGCTCTGGGGAATTCCCGGTCTAC
1._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
2._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
3._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
4._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
5._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
6._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
7._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
8._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
9._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
10._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
11._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
12._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
13._JA_6_/2_[POU]___
TTATGGCTCTGG__AACTCCCCGGCCAA
14._JA_6_/2_[POU]___
TTATGGCTCTGGGGAACTCCCCGGCCAA
15._JA_6_/2_[POU]___
TTATGGCTCTGGGGAGCTCCCCGGCCAA
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
AGGGATCCAACGCCCTGTCCATCGX_XX_X
1._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
2._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
3._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
4._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
5._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
6._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
7._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
8._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
9._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
10._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
11._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
12._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
13._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X
14._JA_6_/2_[POU]___
AGAGATCCAACCAC__GTCCATCGX_XX_X
15._JA_6_/2_[POU]___
AGAGATCCAACCACCTGTCCATCGX_XX_X

Input profile: JA_6_/2_[POU]

 
Mars Center for Cocoa Science, Brazil
Location: 8214 12
 Dapeng Zhang, 2016

1._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 3 > FP
 Dapeng Zhang, 2016

2._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 2 > FP
 Dapeng Zhang, 2016

3._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 1 > FP
 Dapeng Zhang, 2016

4._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 13
 Dapeng Zhang, 2016

5._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 11
 Dapeng Zhang, 2016

6._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 9
 Dapeng Zhang, 2016

7._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 7
 Dapeng Zhang, 2016

8._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 5
 Dapeng Zhang, 2016

9._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 4
 Dapeng Zhang, 2016

10._JA_6_/2_[POU]

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 4
 Dapeng Zhang, 2016

11._JA_6_/2_[POU] GC-08-091-2-14

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

12._JA_6_/2_[POU] GC-08-091-2-14

80.8 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

13._JA_6_/2_[POU]

80.3 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 15
 Dapeng Zhang, 2016

14._JA_6_/2_[POU]

80.3 %
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8214 10
 Dapeng Zhang, 2016

15._JA_6_/2_[POU]

78.8 %
40 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper C 364
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25