SNP Profiles of GU 310   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
CCGGGGCCTTTTTTCCCCAAGGCCAACC
1._GU_310_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
2._GU_310_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
3._GU_310_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
4._GU_310_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
5._RUQ_815
__GGGGCC____TT________CCAA__
6._RUQ_815
CCGGGGCCTTTTTTCCCCAAGGCCAACC
7._GU_310_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
8._RUQ_815
____GG______TT__CC__GG__AA__
9._RUQ_815
GGGGCCGGAAAAAA____AAGGGGAAGG
 1516171819202122232425262728
_Input profile
AAGGCCCCGGGGGGCCCCCCCCAAGGGG
1._GU_310_/P
AAGGCCCCGGGGGGCCCCCCCCAAGGGG
2._GU_310_/P
AAGGCCCCGGGGGGCCCCCCCCAAGGGG
3._GU_310_/P
AAGGCCCCGGGGGGCCCCCCCCAAGGGG
4._GU_310_/P
__GGCCCCGGGGGGCCCCCCCCAAGGGG
5._RUQ_815
______CCGGGG__CCCCCCCCAAGG__
6._RUQ_815
AAGGCCCCGGGGAACCCCCCCCAAGGGG
7._GU_310_/P
AAGGCCCCGGGGAACCCCCCCCAAGGAG
8._RUQ_815
________GGGGAA__CCCC__AA____
9._RUQ_815
AAGGGGGGCCCC__GGCCCC__AA__GG
 29303132333435363738    
_Input profile
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
1._GU_310_/P
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
2._GU_310_/P
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
3._GU_310_/P
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
4._GU_310_/P
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
5._RUQ_815
AACCGGCCAATTTTAA____X_XX_XX_XX_X
6._RUQ_815
AACCGGCCAATTTTAAATGGX_XX_XX_XX_X
7._GU_310_/P
AACCGG__AATTTTAAATGGX_XX_XX_XX_X
8._RUQ_815
____GG________AA____X_XX_XX_XX_X
9._RUQ_815
AAGGGGGGAAAAAAAAATGGX_XX_XX_XX_X

Input profile: GU_310_/P

 
Mars Center for Cocoa Science, Brazil
Location: 8840 5
 Dapeng Zhang, 2016

1._GU_310_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8840 4
 Dapeng Zhang, 2016

2._GU_310_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8840 3
 Dapeng Zhang, 2016

3._GU_310_/P

identical
38 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8840 1
 Dapeng Zhang, 2016

4._GU_310_/P

identical
37 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8840 2
 Dapeng Zhang, 2016

5._GU_310_/P RUQ_815

identical
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

6._GU_310_/P RUQ_815

97.4 %
38 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

7._GU_310_/P

95.9 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 1 A X1 Y33
 Dapeng Zhang, 2016

8._GU_310_/P RUQ_815

92.3 %
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

9._GU_310_/P RUQ_815

48.5 %
33 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP534
26TcSNP529 27TcSNP469 28TcSNP429 29TcSNP372 30TcSNP242
31TcSNP230 32TcSNP226 33TcSNP193 34TcSNP151 35TcSNP150
36TcSNP144 37TcSNP32 38TcSNP25