SNP Profiles of GU 221 /H   View Data

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 Key

 1234567891011121314
_Input profile
CCAGCCCCTTAATTGTTTCCATGGCCAA
1._GC-01-074-4-10
CCAGCCCCTTAATTGTTTCCATGGCCAA
2._GC-01-074-4-10
CCAGGGCCTT__TTTTCCCCAAGGCCAA
3._GC-01-074-4-10
CCAGGGCCTT__TTTTCCCCAAGGCCAA
4._GC-01-074-4-10
CCAGGGCCTT__TTTTCCCCAAGGCCAA
5._GC-01-074-4-10
CCAGGGCCTT__TTTTCCCCAAGGCCAA
6._GC-01-074-4-10
CCAGGGCCTT__TTTTCCCCAAGGCCAA
7._GC-01-074-4-10
CCAGGGCCTT__TTTTCCCCAAGGCCAA
8._GC-01-074-4-10
CCAGGGCCTT__TTTTCCCCAAGGCCAA
9._GU_221_/H
CCAGGGCCTT__TTTTCCCCAAGGCCAA
10._GU_221_/H
CCAGGGCCTT__TTTTCCCCAAGGCCAA
11._GU_221_/H
CCAGGGCCTT__TTTTCCCCAAGGCCAA
12._GU_221_/H
CCAGGGCCTT__TTTTCCCCAAGGCCAA
13._GU_221_/H
CCAGGGCCTT__TTTTCCCCAAGGCCAA
14._GU_221_/H
CCAGGGCCTT__TTTTCCCCAAGGCCAA
15._GU_221_/H
CCAGGGCCTT__TTTTCCCCAAGGCCAA
16._GC-01-74-4-10
GGAGCCGGAA__AAAA____AAGGGGAA
17._GU_221_H_Fld#_162_Plt#_1
GGAGCCGGAACCAAAA____AAGGGGAA
 1516171819202122232425262728
_Input profile
CCTTCGCTTTCCGGAATTCCGGGGCCAC
1._GC-01-074-4-10
CCTTCGCTTTCCGGAATTCCGGGGCCAC
2._GC-01-074-4-10
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
3._GC-01-074-4-10
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
4._GC-01-074-4-10
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
5._GC-01-074-4-10
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
6._GC-01-074-4-10
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
7._GC-01-074-4-10
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
8._GC-01-074-4-10
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
9._GU_221_/H
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
10._GU_221_/H
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
11._GU_221_/H
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
12._GU_221_/H
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
13._GU_221_/H
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
14._GU_221_/H
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
15._GU_221_/H
TTAAGGCCCCGGGGAGCCCCCCGGCCAA
16._GC-01-74-4-10
AAAAGGGGGGCCCC__GGCCCCCC__AA
17._GU_221_H_Fld#_162_Plt#_1
AAAAGGGGGGCCCC__GGCCCCCC__AA
 293031323334353637383940  
_Input profile
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
1._GC-01-074-4-10
GGGGAATTGGCGCCTTGGACAAGGX_XX_X
2._GC-01-074-4-10
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
3._GC-01-074-4-10
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
4._GC-01-074-4-10
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
5._GC-01-074-4-10
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
6._GC-01-074-4-10
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
7._GC-01-074-4-10
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
8._GC-01-074-4-10
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
9._GU_221_/H
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
10._GU_221_/H
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
11._GU_221_/H
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
12._GU_221_/H
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
13._GU_221_/H
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
14._GU_221_/H
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
15._GU_221_/H
AGGGAACCGGCCAATTTTAAAAGGX_XX_X
16._GC-01-74-4-10
__GGAAGGGGGGAAAAAAAAAAGGX_XX_X
17._GU_221_H_Fld#_162_Plt#_1
__GGAAGGGGGGAAAAAAAAAAGGX_XX_X

Input profile: GU_221_/H

 
Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 4 > FP
 Dapeng Zhang, 2016

1._GU_221_/H GC-01-074-4-10

identical
40 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

2._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

3._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

4._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP4
 Mars, 2018

5._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP2
 Mars, 2018

6._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

7._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

8._GU_221_/H GC-01-074-4-10

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

9._GU_221_/H

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 6
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

10._GU_221_/H

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 9
 Dapeng Zhang, 2016

11._GU_221_/H

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 15
 Dapeng Zhang, 2016

12._GU_221_/H

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 16
 Dapeng Zhang, 2016

13._GU_221_/H

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 1 > FP
 Dapeng Zhang, 2016

14._GU_221_/H

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 12 > F
 Dapeng Zhang, 2016

15._GU_221_/H

60.3 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7410 ( >> 1410) 14 > F
 Dapeng Zhang, 2016

16._GU_221_/H GC-01-74-4-10

39.7 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 10, Tree: 6
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._GU_221_/H GU_221_H_Fld#_162_Plt#_1

38.6 %
35 shared markers

USDA-TARS, United States of America
Location: Field: 162, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP226 35TcSNP193
36TcSNP151 37TcSNP150 38TcSNP144 39TcSNP32 40TcSNP25