SNP Profiles of GU 175 /P   View Data

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 Key

 1234567891011121314
_Input profile
CCGGGGCCTTTTTTCCCCAAGGCCAACC
1._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
2._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
3._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
4._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
5._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
6._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
7._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
8._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
9._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
10._GU_175_/P
CCGGGGCCTTTTTTCCCCAAGGCCAACC
11._RUQ_1373
_GGGGCC__TT____CCAA_
12._RUQ_1373
CCGGGGCCTTTTTTCCCCAAGGCCAACC
 1516171819202122232425262728
_Input profile
AAGGCCCCGGGGAACCCCCCGGCCAAAG
1._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
2._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
3._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
4._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
5._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
6._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
7._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
8._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
9._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
10._GU_175_/P
AAGGCCCCGGGGAACCCCCCGGCCAAAG
11._RUQ_1373
___CCGGGG_CCCCCCGGCCAAAG
12._RUQ_1373
AAGGCCCCGGGGAACCCCCCGGCCAAAG
 2930313233343536373839   
_Input profile
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
1._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
2._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
3._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
4._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
5._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
6._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
7._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
8._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
9._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
10._GU_175_/P
GGAACCGGCCAATTTTAATTGGX_XX_XX_X
11._RUQ_1373
_AACCGGCCAATTTTAA__X_XX_XX_X
12._RUQ_1373
AGAACCGGCCAATTTTAATTGGX_XX_XX_X

Input profile: GU_175_/P

 
Mars Center for Cocoa Science, Brazil
Location: 1517 1 > FP
 Dapeng Zhang, 2016

1._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5248 4 > FP
 Dapeng Zhang, 2016

2._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5248 2 > FP
 Dapeng Zhang, 2016

3._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5248 1 > FP
 Dapeng Zhang, 2016

4._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5248 5
 Dapeng Zhang, 2016

5._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1517 8 > FP
 Dapeng Zhang, 2016

6._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1517 11 > F
 Dapeng Zhang, 2016

7._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1517 15
 Dapeng Zhang, 2016

8._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1517 14
 Dapeng Zhang, 2016

9._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1517 9
 Dapeng Zhang, 2016

10._GU_175_/P

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1517 6
 Dapeng Zhang, 2016

11._GU_175_/P RUQ_1373

identical
24 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

12._GU_175_/P RUQ_1373

98.7 %
39 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25