SNP Profiles of EQX-0 (> EQX-O)   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCGGGGCCTTACCCTTCCCCAAAGCCCT
1._EQX_/O_[CHA]___
CCGGGGCCTTACCCTTCCCCAAAGCCCT
2._EQX_/O_[CHA]___
CTAGGGCCTTACCCTTCCCTAAAACCCT
3._EQX_/O_[CHA]___
CTAGGGCCTTACCCTTCCCTAAAACCCT
4._EQX_/O_[CHA]___
CCAGCCTTTTACCTTTCTCCAAAGCCTT
5._EQX_/O_[CHA]___
__AG__TT______TT________CC__
6._EQX_/O_[CHA]___
TTAAGGCTTTAACCTTCCTTAAAACTTT
7._EQX_/O_[CHA]___
TTAAGGCTTTAACCTTCCTTAAAACTTT
8._EQX_/O_[CHA]___
TTAAGGCTTTAACCTTCCTTAAAACTTT
9._EQX_/O_[CHA]___
TTAAGGCTTTAACCTTCCTTAAAACTTT
10._EQX_/O_[CHA]___
TTAAGGCTTTAACCTTCCTTAAAACTTT
11._EQX_/O_[CHA]___
TTAAGGCTTTAACCTTCCTTAAAACTTT
12._EQX_/O_[CHA]___
TTAAGGCTTTAACCTTCCTTAAAACTTT
13._EQX_/O_[CHA]___
TTAAGGCTTTAACCTTCCTTAAAACTTT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCCTCCGGGGAGTTCCCGGTCCACAA
1._EQX_/O_[CHA]___
AACCCTCCGGGGAGTTCCCGGTCCACAA
2._EQX_/O_[CHA]___
AAGGCTCCGGGGAGTTACCCTTCTACAA
3._EQX_/O_[CHA]___
AAGGCTCCGGGGAGTTACCCTTCTACAA
4._EQX_/O_[CHA]___
AAGGTTCTCGGTAACTACGGGTCTACAG
5._EQX_/O_[CHA]___
______CTCGGT__CTACCGGTCTACAG
6._EQX_/O_[CHA]___
AAGGTTCCCCGTGGTTACCGTTTTCCAG
7._EQX_/O_[CHA]___
AAGGTTCCCCGTGGTTACCGTTTTCCAG
8._EQX_/O_[CHA]___
AAGGTTCCCCGTGGTTACCGTTTTCCAG
9._EQX_/O_[CHA]___
AAGGTTCCCCGTGGTTACCGTTTTCCAG
10._EQX_/O_[CHA]___
AAGGTTCCCCGTGGTTACCGTTTTCCAG
11._EQX_/O_[CHA]___
AAGGTTCCCCGTGGTTACCGTTTTCCAG
12._EQX_/O_[CHA]___
AAGGTTCCCCGTGGTTACCGTTTTCCAG
13._EQX_/O_[CHA]___
AAGGTTCCCCGTGGTTACCGTTTTCCAG
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
GGAACCAGCCCCCCGGCCATGGX_XX_XX_X
1._EQX_/O_[CHA]___
GGAACCAGCCCCCCGGCCATGGX_XX_XX_X
2._EQX_/O_[CHA]___
GGAACCAGCCAACCGTACATGGX_XX_XX_X
3._EQX_/O_[CHA]___
GGAACCAGCCAACCGTACATGGX_XX_XX_X
4._EQX_/O_[CHA]___
AGATCCAACGCCTTGGACAAGGX_XX_XX_X
5._EQX_/O_[CHA]___
__ATCCAACGCCTTGGAC____X_XX_XX_X
6._EQX_/O_[CHA]___
GGAACCGGCCAACCGTACTTGGX_XX_XX_X
7._EQX_/O_[CHA]___
GGAACCGGCCAACCGTACTTGGX_XX_XX_X
8._EQX_/O_[CHA]___
GGAACCGGCCAACCGTACTTGGX_XX_XX_X
9._EQX_/O_[CHA]___
GGAACCGGCCAACCGTACTTGGX_XX_XX_X
10._EQX_/O_[CHA]___
GGAACCGGCCAACCGTACTTGGX_XX_XX_X
11._EQX_/O_[CHA]___
GGAACCGGCCAACCGTACTTGGX_XX_XX_X
12._EQX_/O_[CHA]___
GGAACCGGCCAACCGTACTTGGX_XX_XX_X
13._EQX_/O_[CHA]___
GGAACCGGCCAACCGTACTTGGX_XX_XX_X

Input profile: EQX_/O_[CHA]

 
Mars Center for Cocoa Science, Brazil
Location: 7421 2
 Dapeng Zhang, 2016

1._EQX_/O_[CHA] GC-07-077-4-21

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

2._EQX_/O_[CHA]

82.1 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7522 1 > FP
 Dapeng Zhang, 2016

3._EQX_/O_[CHA] GC-07-087-5-22

82.1 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

4._EQX_/O_[CHA] RUQ_138

64.1 %
39 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

5._EQX_/O_[CHA] RUQ_138

63.6 %
22 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

6._EQX_/O_[CHA]

61.5 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7522 4 > FP
 Dapeng Zhang, 2016

7._EQX_/O_[CHA]

61.5 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7522 2 > FP
 Dapeng Zhang, 2016

8._EQX_/O_[CHA]

61.5 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7421 3
 Dapeng Zhang, 2016

9._EQX_/O_[CHA]

61.5 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 7421 1
 Dapeng Zhang, 2016

10._EQX_/O_[CHA] GC-07-077-4-21

61.5 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

11._EQX_/O_[CHA] GC-07-077-4-21

61.5 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

12._EQX_/O_[CHA] GC-07-087-5-22

61.5 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

13._EQX_/O_[CHA] GC-07-087-5-22

61.5 %
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25