SNP Profiles of EET 390 [ECU] View Data

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_Input profile	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
1._EET_390_[ECU]	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
2._EET_390_[ECU]	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
3._EET_390_[ECU]	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
4._EET_390_[ECU]	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
5._GC-01-035-2-12	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
6._GC-01-035-2-12	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
7._GC-01-035-2-12	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
8._GC-01-035-2-12	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
9._GC-01-035-2-12	CC	AA	CG	CC	CT	AC	CT	GG	TT	CT	AA	AG	CC	AA
10._EET_390_[ECU]	CC	__	CG	CT	CT	CC	CT	GG	TT	__	AA	AG	CC	AA
11._EET_390_[ECU]_Fld#_82_Plt#_6	GG	AA	CG	GG	AG	AC	AG	CC	__	__	AA	AG	GG	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
1._EET_390_[ECU]	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
2._EET_390_[ECU]	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
3._EET_390_[ECU]	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
4._EET_390_[ECU]	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
5._GC-01-035-2-12	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
6._GC-01-035-2-12	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
7._GC-01-035-2-12	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
8._GC-01-035-2-12	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
9._GC-01-035-2-12	CT	TT	CG	CT	CT	CG	GT	AA	TT	CC	CG	GG	CT	AA
10._EET_390_[ECU]	CT	TT	CG	CT	CT	CG	GT	AG	TT	__	CG	GG	CT	AA
11._EET_390_[ECU]_Fld#_82_Plt#_6	AG	TT	CG	AG	AG	CG	AC	__	AA	CC	CG	CC	__	AA

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
1._EET_390_[ECU]	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
2._EET_390_[ECU]	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
3._EET_390_[ECU]	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
4._EET_390_[ECU]	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
5._GC-01-035-2-12	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
6._GC-01-035-2-12	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
7._GC-01-035-2-12	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
8._GC-01-035-2-12	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
9._GC-01-035-2-12	GG	AA	AA	CC	AG	CC	CC	CT	GT	CC	AA	CG	X_X	X_X
10._EET_390_[ECU]	GG	__	__	CC	AG	__	CC	__	GT	CC	AA	CG	X_X	X_X
11._EET_390_[ECU]_Fld#_82_Plt#_6	__	AA	AA	GG	AG	GG	CC	AG	AC	CC	AA	CG	X_X	X_X

Input profile: EET_390_[ECU]

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Mars Center for Cocoa Science, Brazil

Location: 1210a 8

Dapeng Zhang, 2016

1._EET_390_[ECU]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1210a 6 > FP

Dapeng Zhang, 2016

2._EET_390_[ECU]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1210a 4 > FP

Dapeng Zhang, 2016

3._EET_390_[ECU]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1210a 1 > FP

Dapeng Zhang, 2016

4._EET_390_[ECU]

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1210a 3

Dapeng Zhang, 2016

5._EET_390_[ECU] GC-01-035-2-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

6._EET_390_[ECU] GC-01-035-2-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

7._EET_390_[ECU] GC-01-035-2-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP2

8._EET_390_[ECU] GC-01-035-2-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6 > FP3

9._EET_390_[ECU] GC-01-035-2-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

10._EET_390_[ECU]

95.5 %
33 shared markers

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Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: La Montaña Lot 6 Row 37 46-48

Dapeng Zhang, 2016

11._EET_390_[ECU] EET_390_[ECU]_Fld#_82_Plt#_6

54.3 %
35 shared markers

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USDA-TARS, United States of America

Location: Field: 82, Tree: 6

Notes: TARS_Cacao_collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25