SNP Profiles of POUND 7/B [POU]   View Data

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 Key

 1234567891011121314
_Input profile
TTCCACGGCTGGAACCAACTAGGGAACC
1._POUND_7_/B
____ACGGCT__AACCAACT____AA__
2._POUND_7_/B
____ACGGCT__AACCAACT____AA__
3._POUND_7_/B
____ACGGCT__AACCAACT____AA__
4._POUND_7_/B
____ACGGCT__AACCAACT____AA__
5._POUND_7_/B
____ACGGCT__AACCAACT____AA__
6._POUND_7_/B
____ACGGCT__AACCAACT____AA__
7._POUND_7_/B
____ACGGCT__AACCAACT____AA__
8._POUND_7_/B
____ACGGCT__AACCAACT____AA__
9._POUND_7_/B
____ACGGCT__AACCAACT____AA__
10._RUQ_24
____ACGGCT__AACCAACT____AA__
11._RUQ_24
____AC__________AA__AG______
12._RUQ_24B
____AC__________AA__AG______
13._GC-01-114-6-11
TTCCACGGCTGGAACCAACTAGGGAACC
14._GC-01-114-6-11
TTCCACGGCTGGAACCAACTAGGGAACC
15._GC-01-114-6-11
TTCCACGGCTGGAACCAACTAGGGAACC
16._GC-01-114-6-11
TTCCACGGCTGGAACCAACTAGGGAACC
17._GC-01-114-6-11
TTCCACGGCTGGAACCAACTAGGGAACC
18._GC-01-114-6-11
TTCCACGGCTGGAACCAACTAGGGAACC
19._GC-01-114-6-11
TTCCACGGCTGGAACCAACTAGGGAACC
20._GC-01-114-6-11
TTCCACGGCTGGAACCAACTAGGGAACC
21._RUQ_24
AACCACCCAGGGAAGGAAAGAGGGAAGG
 1516171819202122232425262728
_Input profile
AACCCTGTGGAACCCTTTGGGGTTACCC
1._POUND_7_/B
AACCCTGTGGAA__CT__GG______CC
2._POUND_7_/B
AACCCTGTGGAA__CT__GG______CC
3._POUND_7_/B
AACCCTGTGGAA__CT__GG______CC
4._POUND_7_/B
AACCCTGTGGAA__CT__GG______CC
5._POUND_7_/B
AACCCTGTGGAA__CT__GG______CC
6._POUND_7_/B
AACCCTGTGGAA__CT__GG______CC
7._POUND_7_/B
AACCCTGTGGAA__CT__GG______CC
8._POUND_7_/B
AACCCTGTGGAA__CT__GG______CC
9._POUND_7_/B
AACCCTGTGGAA__CT__GG______CC
10._RUQ_24
AACCCTGTGGAA__CT__GG______CC
11._RUQ_24
________GGAACC__TTGGGG__ACCC
12._RUQ_24B
________GGAACC__TTGGGG__ACCC
13._GC-01-114-6-11
AACCCTGTGGAACCCTCCGGGGTTACCC
14._GC-01-114-6-11
AACCCTGTGGAACCCTCCGGGGTTACCC
15._GC-01-114-6-11
AACCCTGTGGAACCCTCCGGGGTTACCC
16._GC-01-114-6-11
AACCCTGTGGAACCCTCCGGGGTTACCC
17._GC-01-114-6-11
AACCCTGTGGAACCCTCCGGGGTTACCC
18._GC-01-114-6-11
AACCCTGTGGAACCCTCCGGGGTTACCC
19._GC-01-114-6-11
AACCCTGTGGAACCCTCCGGGGTTACCC
20._GC-01-114-6-11
AACCCTGTGGAACCCTCCGGGGTTACCC
21._RUQ_24
__CC__ACGGAAGGAG__CCGGAAACGG
 29303132333435363738394041 
_Input profile
CCAGCCCTGGGGTTTTTTCCTTCCAAX_X
1._POUND_7_/B
__AG__CT______TT____TTCCAAX_X
2._POUND_7_/B
__AG__CT______TT____TTCCAAX_X
3._POUND_7_/B
__AG__CT______TT____TTCCAAX_X
4._POUND_7_/B
__AG__CT______TT____TTCCAAX_X
5._POUND_7_/B
__AG__CT______TT____TTCCAAX_X
6._POUND_7_/B
__AG__CT______TT____TTCCAAX_X
7._POUND_7_/B
__AG__CT______TT____TTCCAAX_X
8._POUND_7_/B
__AG__CT______TT____TTCCAAX_X
9._POUND_7_/B
__AG__CT______TT____TTCCAAX_X
10._RUQ_24
__AG__CT______TT____TTCCAGX_X
11._RUQ_24
__AGCT________TT______CC__X_X
12._RUQ_24B
__AGCT________TT______CC__X_X
13._GC-01-114-6-11
CCAGCTCTGGGGTTTTTTCCTTCCAAX_X
14._GC-01-114-6-11
CCAGCTCTGGGGTTTTTTCCTTCCAAX_X
15._GC-01-114-6-11
CCAGCTCTGGGGTTTTTTCCTTCCAAX_X
16._GC-01-114-6-11
CCAGCTCTGGGGTTTTTTCCTTCCAAX_X
17._GC-01-114-6-11
CCAGCTCTGGGGTTTTTTCCTTCCAAX_X
18._GC-01-114-6-11
CCAGCTCTGGGGTTTTTTCCTTCCAAX_X
19._GC-01-114-6-11
CCAGCTCTGGGGTTTTTTCCTTCCAAX_X
20._GC-01-114-6-11
CCAGCTCTGGGGTTTTTTCCTTCCAAX_X
21._RUQ_24
__AG__AGCCGG__AAAAGGAAGGAAX_X

Input profile: POUND_7_/B RUQ_24

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._POUND_7_/B

identical
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1611 9
 Dapeng Zhang, 2016

2._POUND_7_/B

identical
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1611 4 > FP
 Dapeng Zhang, 2016

3._POUND_7_/B

identical
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1611 11 > F
 Dapeng Zhang, 2016

4._POUND_7_/B

identical
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1611 10 > F
 Dapeng Zhang, 2016

5._POUND_7_/B

identical
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1611 1 > FP
 Dapeng Zhang, 2016

6._POUND_7_/B

identical
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1611 13
 Dapeng Zhang, 2016

7._POUND_7_/B

identical
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1611 3
 Dapeng Zhang, 2016

8._POUND_7_/B

identical
23 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1611 2
 Dapeng Zhang, 2016
Population Assignment: 
 Dapeng Zhang, 2016

9._POUND_7_/B

identical
23 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F407 T3
 Dapeng Zhang, 2016

10._POUND_7_/B RUQ_24

97.8 %
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

11._POUND_7_/B RUQ_24

96.7 %
15 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

12._POUND_7_/B RUQ_24B

96.7 %
15 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

13._POUND_7_/B GC-01-114-6-11

96.3 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

14._POUND_7_/B GC-01-114-6-11

96.3 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

15._POUND_7_/B GC-01-114-6-11

96.3 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

16._POUND_7_/B GC-01-114-6-11

96.3 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

17._POUND_7_/B GC-01-114-6-11

96.3 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

18._POUND_7_/B GC-01-114-6-11

96.3 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

19._POUND_7_/B GC-01-114-6-11

96.3 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP4
 Mars, 2018

20._POUND_7_/B GC-01-114-6-11

96.3 %
41 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

21._POUND_7_/B RUQ_24

45.7 %
35 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP998
31TcSNP999 32TcSNP1060 33TcSNP1063 34TcSNP1111 35TcSNP1126
36TcSNP1253 37TcSNP1309 38TcSNP1439 39TcSNP1442 40TcSNP1458
41TcSNP1484