SNP Profiles of LCT EEN 261 /S-4   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CTCCCCGTCTAGACCCAACCGGGGATCC
1._LCT_EEN_261_/S-4___
____CC__________AA__GG______
2._LCT_EEN_261_/S-4___
____CC__CTAGACGGAA____GGATCC
3._LCT_EEN_261_/S-4___
AGCCCCACAGAGACGGAAGGGGGGATCG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGACCTGTCGACCCTTCTGGAGTTACCG
1._LCT_EEN_261_/S-4___
__AC____CGACCC__CTGGAG__ACCG
2._LCT_EEN_261_/S-4___
________CGACCC____________CG
3._LCT_EEN_261_/S-4___
__AC__ACCGACGGAA__CCAGAAACCG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CCTTAAAGCCCCGTAAATGTCTCTCTCG
1._LCT_EEN_261_/S-4___
____AGAGCC________GT______CG
2._LCT_EEN_261_/S-4___
CGCT______CC__AAAT____CT__CG
3._LCT_EEN_261_/S-4___
__AGAGAG__GGACAA__AAAGAGAGCG
 43              
_Input profile
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._LCT_EEN_261_/S-4___
__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._LCT_EEN_261_/S-4___
__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._LCT_EEN_261_/S-4___
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: LCT_EEN_261_/S-4 RUQ_1452

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._LCT_EEN_261_/S-4 RUQ_1452

97.1 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._LCT_EEN_261_/S-4 RUQ_1452

90 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

3._LCT_EEN_261_/S-4 RUQ_1452

51.4 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP899 32TcSNP998 33TcSNP999 34TcSNP1060 35TcSNP1063
36TcSNP1111 37TcSNP1126 38TcSNP1253 39TcSNP1309 40TcSNP1439
41TcSNP1442 42TcSNP1458 43TcSNP1484