SNP Profiles of KER 3   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCCCTTTTGGAACCGGCCAAGGAACC
1._RUQ_406
____CC__________GG__AA______
2._RUQ_406
____CC__TTGGAAGGGG____GGAACC
3._RUQ_406
AACCCCAAAAGGAAGGGGGGAAGGAAGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAACCGGCCCCCCCCCCGGAATTAAGG
1._RUQ_406
__AA____CCCCCC__CCGGAA__AAGG
2._RUQ_406
________CCCCCC____________CC
3._RUQ_406
__AA__CCCCCCGGGG__CCAAAAAACC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CCCCAACCCCGGGGTTTTCCCCCCGGGG
1._RUQ_406
____AACC________TT______GG__
2._RUQ_406
GGCC____CC__GGTT____CC__CC__
3._RUQ_406
__GGAA__GGCCGG__AAGGGGGGCCGG

Input profile: KER_3 RUQ_406

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._KER_3 RUQ_406

identical
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._KER_3 RUQ_406

80 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

3._KER_3 RUQ_406

44.4 %
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484