SNP Profiles of EET 95 [ECU]   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCCCGTCTGGACCCAACCAGAGATCC
1._JA_5_/5_[POU]___
____CC__________AA__AG______
2._JA_5_/5_[POU]___
AACCCCACAGGGACGGAAGGAGAGATGG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AGACCTGTCGCCCTTTCTGTAGTTACGG
1._JA_5_/5_[POU]___
__AC____CGCCCT__CTGTAG__ACGG
2._JA_5_/5_[POU]___
__AC__ACCGCCAGAA__ACAGAAACCC
 29 30 31 32 33 34 35 36 37 38 39 40 41  
_Input profile
CGTTAGCCGGAGTTGTCTCTCTCGAGX_X
1._JA_5_/5_[POU]___
____AG________GT______CG__X_X
2._JA_5_/5_[POU]___
__AGAGGGCCAG__ACAGAGAGCGAGX_X

Input profile: JA_5_/5_[POU] RUQ_1539

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._JA_5_/5_[POU] RUQ_1539

identical
15 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._JA_5_/5_[POU] RUQ_1539

47.2 %
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP1060 33TcSNP1063 34TcSNP1111 35TcSNP1126
36TcSNP1253 37TcSNP1309 38TcSNP1439 39TcSNP1442 40TcSNP1458
41TcSNP1484