SNP Profiles of IMC 27   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
TTCCCCGGCCGGAACCAGCCGGGGAACC
1._RUQ_515B
____CC__________AG__GG______
2._RUQ_515
____CC__________AG__GG______
3._RUQ_515
____AC__________AA__AG______
4._RUQ_515
AACCCCCCGGGGAAGGAGGGGGGGAAGG
 1516171819202122232425262728
_Input profile
AACCTTGGGGAACCCCTTGGGGTTCCGG
1._RUQ_515B
__CC____GGAACC__TTGGGG__CCGG
2._RUQ_515
__CC____GGAACC__TTGGGG__CCGG
3._RUQ_515
__CC____CGCCCC__CTTTGG__CCGG
4._RUQ_515
__CC__CCGGAAGGGG__CCGGAACCCC
 2930313233343536373839404142
_Input profile
CCCCAGCCCCGGGGTTTTTTCCTTCGAA
1._RUQ_515B
____AGCC________TT______CG__
2._RUQ_515
____AGCC________TT______CG__
3._RUQ_515
____AATT________TT______GG__
4._RUQ_515
__GGAG__GGCCGG__AAAAGGAACGAA

Input profile: IMC_27 RUQ_515

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._IMC_27 RUQ_515B

identical
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._IMC_27 RUQ_515

identical
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

3._IMC_27 RUQ_515

59.4 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

4._IMC_27 RUQ_515

47.2 %
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484