SNP Profiles of GU 241 /P   View Data

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 Key

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_Input profile
TTCCAATTTTGGAACCGGCCAGGGAACC
1._GU_241_/P
__AATTTT_AACCGGCC__AA_
2._GU_241_/P
__AATTTT_AACCGGCC__AA_
3._GU_241_/P
__AATTTT_AACCGGCC__AA_
4._GU_241_/P
__AATTTT_AACCGGCC__AA_
5._GU_241_/P
__AATTTT_AACCGGCC__AA_
6._GU_241_/P
__AATTTT_AA_GGCC__AA_
7._RUQ_1431
__AA_____GG_AG___
8._RUQ_1431
__AAGTTT_AACCGGCC__AA_
9._RUQ_1431
AACCAAAAAAGGAAGGGGGGAGGGAAGG
10._MITC-000612
AACCAAAAAAGGAAGGGGGGAGGGAAGG
 1516171819202122232425262728
_Input profile
AGAACCGGCCACCCCCCCGGAATTAAGG
1._GU_241_/P
AGAACCGGCCAC_CC_GG___GG
2._GU_241_/P
AGAACCGGCCAC_CC_GG___GG
3._GU_241_/P
AGAACCGGCCAC_CC_GG___GG
4._GU_241_/P
AGAACCGGCCAC_CC_GG___GG
5._GU_241_/P
AGAACCGGCCAC_CC_GG___GG
6._GU_241_/P
AGAACCGGCCAC_CC_GG___GG
7._RUQ_1431
_AA__CCACCC_CCGGAA_AAGG
8._RUQ_1431
AGAACCGGCCAC_CC_GG___GG
9._RUQ_1431
_AA_CCCCACGGGG_CCAAAAAACC
10._MITC-000612
_AA_CCCCACGGGG_CCAAAAAACC
 2930313233343536373839404142
_Input profile
CCCCGGAACCCCGGGGTTTTTTCCCCCG
1._GU_241_/P
_CC_AA_CC___TT__CCCG
2._GU_241_/P
_CC_AA_CC___TT__CCCG
3._GU_241_/P
_CC_AA_CC___TT__CCCG
4._GU_241_/P
_CC_AA_CC___TT__CCCG
5._GU_241_/P
_CC_AA_CC___TT__CCCG
6._GU_241_/P
_CC_AA_CC___TT__CCCG
7._RUQ_1431
__GGAACC____TT___CG
8._RUQ_1431
_CC_AA_CC___TT__CCCG
9._RUQ_1431
_GGGGAA_GGCCGG_AAAAGGGGCG
10._MITC-000612
_GGGGAA_GGCCGG_AAAAGGGGCG
 43             
_Input profile
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._GU_241_/P
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._GU_241_/P
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._GU_241_/P
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._GU_241_/P
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._GU_241_/P
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._GU_241_/P
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._RUQ_1431
_X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._RUQ_1431
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._RUQ_1431
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._MITC-000612
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_241_/P RUQ_1431

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._GU_241_/P

identical
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 10
 Dapeng Zhang, 2016

2._GU_241_/P

identical
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 9
 Dapeng Zhang, 2016

3._GU_241_/P

identical
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 3
 Dapeng Zhang, 2016

4._GU_241_/P

identical
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 2
 Dapeng Zhang, 2016

5._GU_241_/P

identical
24 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 1
 Dapeng Zhang, 2016

6._GU_241_/P

identical
23 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 1 A X2 Y33
 Dapeng Zhang, 2016

7._GU_241_/P RUQ_1431

identical
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

8._GU_241_/P RUQ_1431

97.9 %
24 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

9._GU_241_/P RUQ_1431

48.6 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

10._GU_241_/P MITC-000612

48.6 %
37 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP899 32TcSNP998 33TcSNP999 34TcSNP1060 35TcSNP1063
36TcSNP1111 37TcSNP1126 38TcSNP1253 39TcSNP1309 40TcSNP1439
41TcSNP1442 42TcSNP1458 43TcSNP1484