SNP Profiles of UF 667   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
ACACAGAAAGAGAAACAAGGGGAAAAAC
1._ICS_95___
ACACAGAAAGAGAAACAAGGGGAAAAAC
2._ICS_95___
ACACAGAAAGAGAAACAAGGGGAAAAAC
3._ICS_95___
ACACAGAAAGAGAAACAAGGGGAAAAAC
4._ICS_95___
____________AA______________
5._ICS_95___
____________AA______________
6._ICS_95___
__________CT________GG______
7._ICS_95___
____________AA__AA__________
8._ICS_95___
__________CTAA__AA__________
9._ICS_95___
__________CTAA__AA__________
10._ICS_95___
__________CTAA__AA__________
11._ICS_95___
__________CTAA__AA__________
12._ICS_95___
__________CTAA__AA__________
13._ICS_95___
__________CTAA__AA__________
14._ICS_95___
__________CTAA__AA__________
15._ICS_95___
__________CTAA__AA__________
16._ICS_95___
__________CTAA__AA__________
17._ICS_95___
__________CTAA__AA__________
18._ICS_95___
__________CTAA__AA__________
19._ICS_95___
__________CTAA__AA__________
20._ICS_95___
__________CTAA__AA__________
21._ICS_95___
__________CTAA__AA__________
22._ICS_95___
__________CTAA__AA__________
23._ICS_95___
__________CTAA__AA__________
24._ICS_95___
__________CTAA__AA__________
25._ICS_95___
__________CTAA__AA__________
26._ICS_95___
__________CTAA__AA__________
27._ICS_95___
__________CTAA__AA__________
28._ICS_95___
__________CTAA__AA__________
29._ICS_95___
__________CTAA__AA__________
30._ICS_95___
__________CTAA__AA__________
31._ICS_95___
__________CTAA__AA__________
32._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
33._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
34._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
35._ICS_95___
ACACAGAACTCTAAGTAACCGGTT__GT
36._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
37._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
38._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
39._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
40._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
41._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
42._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
43._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
44._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
45._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
46._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
47._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
48._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
49._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
50._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
51._ICS_95___
ACACAGAACT__AAGTAACCGGTTTTGT
52._ICS_95___
__________CTAA__AA__________
53._ICS_95___
__________CTAA__AA__________
54._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
55._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
56._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
57._ICS_95___
__________CTAA__AA__________
58._ICS_95___
__________CTAA__AA__________
59._ICS_95___
__________CTAA__AA__________
60._ICS_95___
__________CT__GT____GG______
61._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
62._ICS_95___
__________CTAA__AA__________
63._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
64._ICS_95___
ACACAGAACTCTAAGTAACCGGTTTTGT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGAAGGAGAAGGAAAGACAACCAGACAG
1._ICS_95___
GGAAGGAGAAGGAAAGACAACCAGACAG
2._ICS_95___
GGAAGGAGAAGGAAAGACAACCAGACAG
3._ICS_95___
GGAAGGAGAAGGAAAGACAACCAGACAG
4._ICS_95___
__GT____________AC__CG______
5._ICS_95___
__GT____________AC__CG______
6._ICS_95___
______________CTAC__CC____CT
7._ICS_95___
____CC__AA__TT__ACTTCGAGGTCT
8._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
9._ICS_95___
____CC__AA__TT__ACTTCGAGGTCT
10._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
11._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
12._ICS_95___
____CC__AA__TT__ACTTCGAGGTCT
13._ICS_95___
__GTCC__AA__TT__ACTT__AGGTCT
14._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
15._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
16._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
17._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
18._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
19._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
20._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
21._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
22._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
23._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
24._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
25._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
26._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
27._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
28._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
29._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
30._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
31._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
32._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
33._ICS_95___
__GTCCTTAAGGTTCTACTTCGAGGTCT
34._ICS_95___
CC__CCTTAAGGTTCTACTTCGAGGTCT
35._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
36._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
37._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
38._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
39._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
40._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
41._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
42._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
43._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
44._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
45._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
46._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
47._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
48._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
49._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
50._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
51._ICS_95___
CC__CCTTAAGGTTCTACTTCGAGGTCT
52._ICS_95___
__GTCC______TT__ACTTCGAGGTCT
53._ICS_95___
__GTCC__AA__TT__ACTTCGAGGTCT
54._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
55._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
56._ICS_95___
CCGTCCTT__GGTTCTACTTCGAGGTCT
57._ICS_95___
__GTCC__AA__TT__ACTTGGAGGTCT
58._ICS_95___
__GTCC__AA__TT__ACTTGGAGGTCT
59._ICS_95___
__GTCC__AA__TT__ACTTGGAGGTCT
60._ICS_95___
__GT__CT______CTACTTCGAGGTCT
61._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
62._ICS_95___
__GTCC__AA__TT__ACTTGGAGGTCT
63._ICS_95___
CC__CCTTAAGGTTCTACTTCGAGGTCT
64._ICS_95___
CCGTCCTTAAGGTTCTACTTCGAGGTCT
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AGATAGACCGGGGGAGGGCCATATAGAA
1._ICS_95___
AGATAGACCGGGGGAGGGCCATATAGAA
2._ICS_95___
AGATAGACCGGGGGAGGGCCATATAGAA
3._ICS_95___
AGATAGACCGGGGGAGGGCCATATAGAA
4._ICS_95___
__________GG________________
5._ICS_95___
__________GG____________AG__
6._ICS_95___
____AGACCGGG______________AA
7._ICS_95___
______ACCGGG__CTGG____AT____
8._ICS_95___
CT____ACCGGG__CTGG____AT____
9._ICS_95___
CT____ACCGGG__CTGG____AT____
10._ICS_95___
CT____ACCGGG__CTGG____AT____
11._ICS_95___
CT____ACCG____CTGG____AT____
12._ICS_95___
CT____ACCGGG__CTGG____AT____
13._ICS_95___
CT____ACCGGG__CTGG____AT____
14._ICS_95___
CT____ACCGGG__CTGG____AT____
15._ICS_95___
CT____ACCGGG__CTGG____AT____
16._ICS_95___
CT____ACCGGG__CTGG____AT____
17._ICS_95___
CT____ACCGGG__CTGG____AT____
18._ICS_95___
CT____ACCGGG__CTGG____AT____
19._ICS_95___
CT____ACCGGG__CTGG____AT____
20._ICS_95___
CT____ACCGGG__CTGG____AT____
21._ICS_95___
CT____ACCGGG__CTGG____AT____
22._ICS_95___
CT____ACCGGG__CTGG____AT____
23._ICS_95___
CT____ACCGGG__CTGG____AT____
24._ICS_95___
CT____ACCGGG__CTGG____AT____
25._ICS_95___
CT____ACCGGG__CTGG____AT____
26._ICS_95___
CT____ACCGGG__CTGG____AT____
27._ICS_95___
CT____ACCGGG__CTGG____AT____
28._ICS_95___
CT____ACCGGG__CTGG____AT____
29._ICS_95___
CT____ACCGGG__CTGG____AT____
30._ICS_95___
CT____ACCGGG__CTGG____AT____
31._ICS_95___
CT____ACCGGG__CTGG____AT____
32._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
33._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
34._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
35._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
36._ICS_95___
CTATAGACCG__GGCTGGGGATATAGAA
37._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
38._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
39._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
40._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
41._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
42._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
43._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
44._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
45._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
46._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
47._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
48._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
49._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
50._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
51._ICS_95___
__CCAGACCGGGCCCTGGGGATATAGAA
52._ICS_95___
CT____ACCGGG__CTGG____AT____
53._ICS_95___
CT____ACCGGG__CTGG____AT____
54._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
55._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
56._ICS_95___
CTATAGACCGGGGGCTGGGGATATAGAA
57._ICS_95___
CT____ACCGGG__CTGG____AT____
58._ICS_95___
CT____ACCGGG__CTGG____AT____
59._ICS_95___
CT____ACCGGG__CTGG____AT____
60._ICS_95___
____AGACCGGG__CT________AGAA
61._ICS_95___
CT__AGACCGGG__CTGGGGATAT__AA
62._ICS_95___
CT____ACGGGG__CTGG____AT____
63._ICS_95___
CTCCAGACCGGGCCCTGGGGATATAGAA
64._ICS_95___
CTCCAGACCGGGCCCTGGGGATATAGAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
ATAGAGAGGGAACGAGCCCCGGACAACC
1._ICS_95___
ATAGAGAGGGAACGAGCCCCGGACAACC
2._ICS_95___
ATAGAGAGGGAACGAGCCCCGGACAACC
3._ICS_95___
ATAGAGAGGGAACGAGCCCCGGACAACC
4._ICS_95___
__________________AC______CC
5._ICS_95___
__________________AC______CC
6._ICS_95___
ATCT________CG____________CC
7._ICS_95___
AT______GG________CC__GT__CC
8._ICS_95___
AT______GG________CC__GT__CC
9._ICS_95___
AT______GG________CC__GT__CC
10._ICS_95___
AT______GG________CC__GT__CC
11._ICS_95___
AT______GG________CC__GT__CC
12._ICS_95___
AT______GG________CC__GT__CC
13._ICS_95___
AT______GG________CC__GT__CC
14._ICS_95___
AT______GG________CC__GT__CC
15._ICS_95___
AT______GG________CC__GT__CC
16._ICS_95___
AT______GG________CC__GT__CC
17._ICS_95___
AT______GG________CC__GT__CC
18._ICS_95___
AT______GG________CC__GT__CC
19._ICS_95___
AT______GG________CC__GT__CC
20._ICS_95___
AT______GG________CC__GT__CC
21._ICS_95___
AT______GG________CC__GT__CC
22._ICS_95___
AT______GG________CC__GT__CC
23._ICS_95___
AT______GG________CC__GT__CC
24._ICS_95___
AT______GG________CC__GT__CC
25._ICS_95___
AT______GG________CC__GT__CC
26._ICS_95___
AT______GG________CC__GT__CC
27._ICS_95___
AT______GG________CC__GT__CC
28._ICS_95___
AT______GG________CC__GT__CC
29._ICS_95___
AT______GG________CC__GT__CC
30._ICS_95___
AT______GG________CC__GT__CC
31._ICS_95___
AT______GG________CC__GT__CC
32._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
33._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
34._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
35._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
36._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
37._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
38._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
39._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
40._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
41._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
42._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
43._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
44._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
45._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
46._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
47._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
48._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
49._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
50._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
51._ICS_95___
ATCTAGAGGGAACGCTCCCCGGGTAACC
52._ICS_95___
AT______GG________CC__GT__CC
53._ICS_95___
AT______GG________CC__GT__CC
54._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
55._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
56._ICS_95___
ATCTAGAGGGAACG__CCCCGGGTAACC
57._ICS_95___
AT______GG________CC__GT__CC
58._ICS_95___
AT______GG________CC__GT__CC
59._ICS_95___
AT______GG________CC__GT__CC
60._ICS_95___
AT__________CG____CC__GT__CC
61._ICS_95___
ATCTAGAGGGAACGCTCCCCGGGTAACC
62._ICS_95___
AT______GG________CC__GT__CC
63._ICS_95___
ATCTAGAGGGAACGCTCCCCGGGTAACC
64._ICS_95___
ATCTAGAGGGAACGCTCCCCGGGTAACC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
CCAGAGAGAAAGAAAGAGACACACACCC
1._ICS_95___
CCAGAGAGAAAGAAAGAGACACACACCC
2._ICS_95___
CCAGAGAGAAAGAAAGAGACACACACCC
3._ICS_95___
CCAGAGAGAAAGAAAGAGACACACACCC
4._ICS_95___
CC__________TTAG________ACTT
5._ICS_95___
CC__CT______TTAG________ACTT
6._ICS_95___
CC__CT____________GT________
7._ICS_95___
CC____CT____TT______________
8._ICS_95___
CC____CT____TT______________
9._ICS_95___
CC____CT____TT______________
10._ICS_95___
CC____CT____TT______________
11._ICS_95___
CC____CT____________________
12._ICS_95___
CC____CT____TT______________
13._ICS_95___
CC____CT____TT______________
14._ICS_95___
CC____CT____TT______________
15._ICS_95___
CC____CT____TT______________
16._ICS_95___
CC____CT____TT______________
17._ICS_95___
CC____CT____TT______________
18._ICS_95___
CC____CT____TT______________
19._ICS_95___
CC____CT____TT______________
20._ICS_95___
CC____CT____TT______________
21._ICS_95___
CC____CT____TT______________
22._ICS_95___
CC____CT____TT______________
23._ICS_95___
CC____CT____TT______________
24._ICS_95___
CC____CT____TT______________
25._ICS_95___
CC____CT____TT______________
26._ICS_95___
CC____CT____TT______________
27._ICS_95___
CC____CT____TT______________
28._ICS_95___
CC____CT____TT______________
29._ICS_95___
CC____CT____TT______________
30._ICS_95___
CC____CT____TT______________
31._ICS_95___
CC____CT____TT______________
32._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
33._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
34._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
35._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
36._ICS_95___
CCCTCTCTAGAG__AGCTGTGTGTACGG
37._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
38._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
39._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
40._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
41._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
42._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
43._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
44._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
45._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
46._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
47._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
48._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
49._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
50._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
51._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
52._ICS_95___
CC____CT____TT______________
53._ICS_95___
CC____CT____TT______________
54._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGT__GG
55._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
56._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
57._ICS_95___
CC____CT____TT______________
58._ICS_95___
CC____CT____TT______________
59._ICS_95___
CC____CT____TT______________
60._ICS_95___
CC__CTCT____TTAGCT____GTAC__
61._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
62._ICS_95___
CC____CT____TT______________
63._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
64._ICS_95___
CCCTCTCTAGAGTTAGCTGTGTGTACGG
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
1._ICS_95___
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
2._ICS_95___
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
3._ICS_95___
AGCGGGGGAGACAAGGAGAAAGAAX_XX_X
4._ICS_95___
__CG____AG____________AAX_XX_X
5._ICS_95___
__CG____AG______________X_XX_X
6._ICS_95___
AGCGCC______________CT__X_XX_X
7._ICS_95___
__CGCC______TTGG__AA__AAX_XX_X
8._ICS_95___
__CG________TTGG__AACTAAX_XX_X
9._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
10._ICS_95___
__CGCC______TTGG__AA__AAX_XX_X
11._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
12._ICS_95___
__CGCC______TTGG____CTAAX_XX_X
13._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
14._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
15._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
16._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
17._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
18._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
19._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
20._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
21._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
22._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
23._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
24._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
25._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
26._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
27._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
28._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
29._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
30._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
31._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
32._ICS_95___
AACG__CCAGACTTGGCTAACTAAX_XX_X
33._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
34._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
35._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
36._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
37._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
38._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
39._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
40._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
41._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
42._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
43._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
44._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
45._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
46._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
47._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
48._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
49._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
50._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
51._ICS_95___
AACGCCCCAGACTTGGCTAA__AAX_XX_X
52._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
53._ICS_95___
__CGCC______TTGG____CTAAX_XX_X
54._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
55._ICS_95___
AACGCCCCAGACTTGGCT__CTAAX_XX_X
56._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X
57._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
58._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
59._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
60._ICS_95___
__CGCC__GGAC__________AAX_XX_X
61._ICS_95___
AACGCCCCAGACTTGGCTAA__AAX_XX_X
62._ICS_95___
__CGCC______TTGG__AACTAAX_XX_X
63._ICS_95___
AACGCCCCAGACTTGGCT__CTAAX_XX_X
64._ICS_95___
AACGCCCCAGACTTGGCTAACTAAX_XX_X

Input profile: ICS_95 GC-02-002-1-2

 
Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: 13 > FP3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

1._ICS_95 RUQ_1144

identical
82 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

2._ICS_95 MITC-000342

identical
82 shared markers

USDA-SHRS, United States of America
 Mars, 2018

3._ICS_95 ICS_95_Fld#_13_Plt#_1

identical
82 shared markers

USDA-TARS, United States of America
Location: Field: 13, Tree: 1
 Mars, 2018

4._ICS_95 RUQ_1144

73.3 %
15 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

5._ICS_95 RUQ_1144B

68.8 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

6._ICS_95 RUQ_1144

63.6 %
22 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

7._ICS_95

62.9 %
31 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 1 > FP
 Dapeng Zhang, 2016

8._ICS_95

57.4 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 1
 Dapeng Zhang, 2016

9._ICS_95

57.4 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 3
 Dapeng Zhang, 2016

10._ICS_95

57.4 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 13 > F
 Dapeng Zhang, 2016

11._ICS_95

56.1 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 12
 Dapeng Zhang, 2016

12._ICS_95

56.1 %
33 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 3 > FP
 Dapeng Zhang, 2016

13._ICS_95 RUQ_1144

55.9 %
34 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

14._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 2
 Dapeng Zhang, 2016

15._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 13
 Dapeng Zhang, 2016

16._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 11
 Dapeng Zhang, 2016

17._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 9
 Dapeng Zhang, 2016

18._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 5
 Dapeng Zhang, 2016

19._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 3
 Dapeng Zhang, 2016

20._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 1
 Dapeng Zhang, 2016

21._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 14
 Dapeng Zhang, 2016

22._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 10
 Dapeng Zhang, 2016

23._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 5
 Dapeng Zhang, 2016

24._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 1
 Dapeng Zhang, 2016

25._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 2 > FP
 Dapeng Zhang, 2016

26._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 16
 Dapeng Zhang, 2016

27._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 2102 9
 Dapeng Zhang, 2016

28._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 6
 Dapeng Zhang, 2016

29._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 5
 Dapeng Zhang, 2016

30._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 4
 Dapeng Zhang, 2016

31._ICS_95

55.7 %
35 shared markers

Mars Center for Cocoa Science, Brazil
Location: 1705 3
 Dapeng Zhang, 2016

32._ICS_95 GC-01-128-7-05

55.6 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

33._ICS_95 GC-02-002-1-02

55.6 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

34._ICS_95 GC-03-039-4-03

55.6 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

35._ICS_95 GC-03-039-4-03

55.6 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

36._ICS_95 GC-03-039-4-03

55.1 %
79 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

37._ICS_95 GC-01-128-7-05

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

38._ICS_95 GC-03-040-4-04

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

39._ICS_95 GC-03-040-4-04

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

40._ICS_95 GC-03-040-4-04

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

41._ICS_95 GC-03-040-4-04

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

42._ICS_95 GC-03-040-4-04

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

43._ICS_95 GC-01-128-7-05

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

44._ICS_95 GC-01-128-7-05

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

45._ICS_95 GC-01-128-7-05

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

46._ICS_95 GC-02-002-1-02

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

47._ICS_95 GC-03-039-4-03

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

48._ICS_95 GC-03-039-4-03

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

49._ICS_95 GC-03-039-4-03

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

50._ICS_95 GC-03-040-4-04

54.9 %
81 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

51._ICS_95 GC-02-2-1-02

54.5 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL1
Notes: PL1 FP4
 Mars, 2018

52._ICS_95

54.4 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3404 15
 Dapeng Zhang, 2016

53._ICS_95

54.4 %
34 shared markers

Mars Center for Cocoa Science, Brazil
Location: 3403 7
 Dapeng Zhang, 2016

54._ICS_95 GC-01-128-7-05

54.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

55._ICS_95 GC-03-039-4-03

54.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

56._ICS_95 GC-03-040-4-04

54.4 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

57._ICS_95

54.3 %
35 shared markers

Estation Experimental Tropical Pichilingue, Ecuador
 Dapeng Zhang, 2016

58._ICS_95

54.3 %
35 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P26 56
 Dapeng Zhang, 2016

59._ICS_95

54.3 %
35 shared markers

Malaysian Cocoa Board (MCB), Malaysia
Location: Row 10 C0204 2A
 Dapeng Zhang, 2016

60._ICS_95 RUQ_1144

54.1 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

61._ICS_95 GC-02-2-1-02

53.2 %
78 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL13
Notes: PL13 FP13
 Mars, 2018

62._ICS_95

52.9 %
35 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: San Juan Block1
 Dapeng Zhang, 2016

63._ICS_95 GC-02-2-1-02

51.9 %
80 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL3
Notes: PL3 FP1
 Mars, 2018

64._ICS_95 GC-02-2-1-02

51.8 %
82 shared markers

Mars Center for Cocoa Science, Brazil
Location: Field: 2, Block: 1, Rep: 2, Tree: PL2
Notes: PL2 FP2
 Mars, 2018

 


  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998