SNP Profiles of GU 310 /P   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
AATTCCGGGGTTGGGTAAGTCCCTAGCC
1._RUQ_815
AATTGGGGAATTGGTTAAGGCCTTGGCT
2._RUQ_815
____CC________AA________GG__
3._GU_310_/P
____GG________TT____CC__GG__
4._GU_310_/P
____GG________TT____CC__GG__
5._GU_310_/P
____GG________TT____CC__GG__
6._GU_310_/P
____GG________TT____CC__GG__
7._GU_310_/P
____GG________TT____CC__GG__
8._RUQ_815
____GG________TT____CC__GG__
9._GU_310_/P
____GG________TT____CC__GG__
10._RUQ_815
____GG________TT____________
 1516171819202122232425262728
_Input profile
ATTTCCAGCGGGCCCTATCCTTCTAGGT
1._RUQ_815
AACTCCAACCGGGGCTAAAATTCTAAGG
2._RUQ_815
______AA__GGCCCC__AA____AACC
3._GU_310_/P
______AA____GG____________GG
4._GU_310_/P
______AA____GG____________GG
5._GU_310_/P
______AA____GG____________GG
6._GU_310_/P
______AA____GG____________GG
7._GU_310_/P
______AA____GG____________GG
8._RUQ_815
______AA____GG____________GG
9._GU_310_/P
______AA____GG____________GG
10._RUQ_815
____CCAA____GG____AA____AAGG
 2930313233343536373839404142
_Input profile
TTGGAGCCAGTTCTACATCGAACCCCAC
1._RUQ_815
CCCCAACCAACTCCCCATCCAAAACCCC
2._RUQ_815
____________GGCC__CC__AA____
3._GU_310_/P
____GG________CC__CC__AA____
4._GU_310_/P
____GG________CC__CC__AA____
5._GU_310_/P
____GG________CC__CC__AA____
6._GU_310_/P
____GG________CC__CC__AA____
7._GU_310_/P
____GG________CC__CC__AA____
8._RUQ_815
____AA________CC__CC__AA____
9._GU_310_/P
____AA________CC__CC__AA____
10._RUQ_815
CC__________CCCC__CC__AA____
 4344454647484950515253545556
_Input profile
CCCCAGAATTAGGGAGCTACAAGTGGAC
1._RUQ_815
TTAAGGAACCGGGGGGCCAAAATTGGCC
2._RUQ_815
____GG____GG______AA________
3._GU_310_/P
__________GG______AA________
4._GU_310_/P
__________GG______AA________
5._GU_310_/P
__________GG______AA________
6._GU_310_/P
__________GG______AA________
7._GU_310_/P
__________GG______AA________
8._RUQ_815
__________GG______AA________
9._GU_310_/P
__________GG______AA________
10._RUQ_815
____GG____GG______AA________
 575859           
_Input profile
TTACCCX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_815
TTACTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_815
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._GU_310_/P
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._GU_310_/P
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._GU_310_/P
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._GU_310_/P
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._GU_310_/P
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._RUQ_815
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._GU_310_/P
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._RUQ_815
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GEBP_510_/A-F_[ADI] RUQ_1671

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._GU_310_/P RUQ_815

59.3 %
59 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._GU_310_/P RUQ_815

44.1 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._GU_310_/P

42.3 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8840 5
 Dapeng Zhang, 2016

4._GU_310_/P

42.3 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8840 4
 Dapeng Zhang, 2016

5._GU_310_/P

42.3 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8840 3
 Dapeng Zhang, 2016

6._GU_310_/P

42.3 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8840 2
 Dapeng Zhang, 2016

7._GU_310_/P

42.3 %
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8840 1
 Dapeng Zhang, 2016

8._GU_310_/P RUQ_815

42.3 %
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

9._GU_310_/P

42.3 %
13 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 1 A X1 Y33
 Dapeng Zhang, 2016

10._GU_310_/P RUQ_815

37.5 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1230 10TcSNP1205
11TcSNP1144 12TcSNP1112 13TcSNP1062 14TcSNP1053 15TcSNP1019
16TcSNP1010 17TcSNP999 18TcSNP998 19TcSNP945 20TcSNP899
21TcSNP872 22TcSNP836 23TcSNP835 24TcSNP823 25TcSNP800
26TcSNP739 27TcSNP731 28TcSNP723 29TcSNP702 30TcSNP660
31TcSNP645 32TcSNP644 33TcSNP642 34TcSNP640 35TcSNP602
36TcSNP591 37TcSNP589 38TcSNP577 39TcSNP546 40TcSNP529
41TcSNP522 42TcSNP519 43TcSNP421 44TcSNP363 45TcSNP329
46TcSNP305 47TcSNP290 48TcSNP230 49TcSNP194 50TcSNP189
51TcSNP176 52TcSNP144 53TcSNP143 54TcSNP131 55TcSNP52
56TcSNP49 57TcSNP33 58TcSNP19 59TcSNP13