SNP Profiles of GU 241 /P   View Data

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 Key

 1234567891011121314
_Input profile
TTACTTCCGGTTAAAACCGGGGGGCCAA
1._RUQ_1431
_______AA___GG__
2._GU_241_/P
_______AA___GG__
3._GU_241_/P
_______AA___GG__
4._GU_241_/P
_______AA___GG__
5._GU_241_/P
_______AA___GG__
6._GU_241_/P
_______AA___GG__
7._RUQ_1431
_______AA___GG__
8._GU_241_/P
_______AA___GG__
9._RUQ_1431
_______AA___GG__
10._MITC-000612
_______AA___GG__
 1516171819202122232425262728
_Input profile
AGAATTCCCCAAAGCCAAACCCCCAACC
1._RUQ_1431
AG____AA_CC_ACCC___
2._GU_241_/P
_____AA_CC_AC____
3._GU_241_/P
_____AA_CC_AC____
4._GU_241_/P
_____AA_CC_AC____
5._GU_241_/P
_____AA_CC_AC____
6._GU_241_/P
_____AA_CC_AC____
7._RUQ_1431
_____AA_CC_AC____
8._GU_241_/P
_____AA_CC_AC____
9._RUQ_1431
AG____AA_CC_ACGG___
10._MITC-000612
AG____AA_CC_ACGG___
 2930313233343536373839404142
_Input profile
AGCCCCGGAACTTTAAAACCGGGGCCAA
1._RUQ_1431
__CCGGAA__AA__GGGG_AA
2._GU_241_/P
AG__GG______GG__AA
3._GU_241_/P
AG__GG______GG__AA
4._GU_241_/P
AG__GG______GG__AA
5._GU_241_/P
AG__GG______GG__AA
6._GU_241_/P
AG__GG______GG__AA
7._RUQ_1431
AG__GG______GG__AA
8._GU_241_/P
AG__GG______GG__AA
9._RUQ_1431
___CCAA__AA_CCCCGG_AA
10._MITC-000612
___CCAA__AA_CCCCGG_AA
 4344454647484950515253545556
_Input profile
CCCCAATTGGCTCCGTAATTGGTTAAGG
1._RUQ_1431
CC________TT____
2._GU_241_/P
____GG_CC__TT____
3._GU_241_/P
____GG_CC__TT____
4._GU_241_/P
____GG_CC__TT____
5._GU_241_/P
____GG_CC__TT____
6._GU_241_/P
____GG_CC__TT____
7._RUQ_1431
____GG_CC__TT____
8._GU_241_/P
____GG_CC__TT____
9._RUQ_1431
____GG____AA____
10._MITC-000612
____GG____AA____
 575859           
_Input profile
CGTTAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_1431
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._GU_241_/P
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._GU_241_/P
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._GU_241_/P
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._GU_241_/P
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._GU_241_/P
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
7._RUQ_1431
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
8._GU_241_/P
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
9._RUQ_1431
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
10._MITC-000612
CG__X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: GU_241_/P RUQ_1431

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._GU_241_/P RUQ_1431

identical
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._GU_241_/P

identical
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 10
 Dapeng Zhang, 2016

3._GU_241_/P

identical
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 9
 Dapeng Zhang, 2016

4._GU_241_/P

identical
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 3
 Dapeng Zhang, 2016

5._GU_241_/P

identical
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 2
 Dapeng Zhang, 2016

6._GU_241_/P

identical
13 shared markers

Mars Center for Cocoa Science, Brazil
Location: 8838 1
 Dapeng Zhang, 2016

7._GU_241_/P RUQ_1431

identical
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

8._GU_241_/P

identical
13 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 1 A X2 Y33
 Dapeng Zhang, 2016

9._GU_241_/P RUQ_1431

76.5 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

10._GU_241_/P MITC-000612

76.5 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP13 2TcSNP19 3TcSNP33 4TcSNP49 5TcSNP52
6TcSNP131 7TcSNP143 8TcSNP144 9TcSNP176 10TcSNP189
11TcSNP194 12TcSNP230 13TcSNP290 14TcSNP305 15TcSNP329
16TcSNP363 17TcSNP421 18TcSNP519 19TcSNP522 20TcSNP529
21TcSNP546 22TcSNP577 23TcSNP589 24TcSNP591 25TcSNP602
26TcSNP640 27TcSNP642 28TcSNP644 29TcSNP645 30TcSNP660
31TcSNP702 32TcSNP723 33TcSNP731 34TcSNP739 35TcSNP800
36TcSNP823 37TcSNP835 38TcSNP836 39TcSNP872 40TcSNP899
41TcSNP945 42TcSNP998 43TcSNP999 44TcSNP1010 45TcSNP1019
46TcSNP1053 47TcSNP1062 48TcSNP1112 49TcSNP1144 50TcSNP1205
51TcSNP1230 52TcSNP1253 53TcSNP1275 54TcSNP1293 55TcSNP1401
56TcSNP1404 57TcSNP1458 58TcSNP1524 59TcSNP1527