SNP Profiles of JA 10 /12 [POU]   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
ATCTCGAGAGTTGGGTAAGTCTTTAGCC
1._EET_59_[ECU]___
____CG________GT____________
2._EET_59_[ECU]___
____CG________GT____________
3._EET_59_[ECU]___
____CG________AC________AG__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACTCTAGCCAGGGAAACTTCTAGGGTT
1._EET_59_[ECU]___
____CCAG____GG__AC____AGGGTT
2._EET_59_[ECU]___
____CCAG____GG__AC____AGGGTT
3._EET_59_[ECU]___
______AG__AGCC__AC____AGCC__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CGAGCCAACTCTCCAACGAAACCTACCT
1._EET_59_[ECU]___
__________CTCC__GG__AC______
2._EET_59_[ECU]___
__________CTCC__GG__AC______
3._EET_59_[ECU]___
__________AGCC__CG__AC______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
ACGGAACTAAGTAGTTCCATTTGGCCCT
1._EET_59_[ECU]___
__GG____AA______CC__________
2._EET_59_[ECU]___
__GG____AA______CC__________
3._EET_59_[ECU]___
__GG____AA______CC__________
 57 58             
_Input profile
ACCTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._EET_59_[ECU]___
____X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._EET_59_[ECU]___
____X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._EET_59_[ECU]___
____X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: EET_59_[ECU] RUQ_791

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._EET_59_[ECU] RUQ_791

93.8 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._EET_59_[ECU] RUQ_845

93.8 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

3._EET_59_[ECU] RUQ_791

75 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1230 10TcSNP1205
11TcSNP1144 12TcSNP1112 13TcSNP1062 14TcSNP1053 15TcSNP1019
16TcSNP1010 17TcSNP999 18TcSNP998 19TcSNP945 20TcSNP899
21TcSNP872 22TcSNP835 23TcSNP823 24TcSNP800 25TcSNP739
26TcSNP731 27TcSNP723 28TcSNP702 29TcSNP660 30TcSNP645
31TcSNP644 32TcSNP642 33TcSNP640 34TcSNP602 35TcSNP591
36TcSNP589 37TcSNP577 38TcSNP546 39TcSNP529 40TcSNP522
41TcSNP519 42TcSNP421 43TcSNP363 44TcSNP329 45TcSNP305
46TcSNP290 47TcSNP230 48TcSNP194 49TcSNP189 50TcSNP176
51TcSNP144 52TcSNP143 53TcSNP131 54TcSNP52 55TcSNP49
56TcSNP33 57TcSNP19 58TcSNP13