SNP Profiles of MATINA 1 /6   View Data

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 Key

 1234567891011121314
_Input profile
TTCTCGGGAGTTTTTTCCACGTCCCTAA
1._RUQ_1715
TTCCGGGGGGTTGGTTCCAATTTTTTAA
2._RUQ_1715
____CC________AA__________AA
3._MITC-000114
____CC________AA__________AA
 1516171819202122232425262728
_Input profile
CCTTCCCTAACGGGCCTTAAAACTCCGG
1._RUQ_1715
CCAATTTTGGCCAAGGTTAAAATTTTGG
2._RUQ_1715
________GG__AACCCC__AA____GG
3._MITC-000114
________GG__AACCCC__AA____GG
 2930313233343536373839404142
_Input profile
GGTTCGAACCAGTTCCAAATCCAAACCC
1._RUQ_1715
GGTTGGAACCAATTCCAATTCCGGACTT
2._RUQ_1715
CC____________GGAA__CC__CC__
3._MITC-000114
CC____________GGAA__CC__CC__
 4344454647484950515253545556
_Input profile
AACTACAGAATTAGGGGGCCACAAGTGG
1._RUQ_1715
CCCCAAGGAATTAAGGGGCCCCTTTTTT
2._RUQ_1715
______GG____AA______CC______
3._MITC-000114
______GG____AA______CC______
 57585960          
_Input profile
CCCTCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_1715
CCCCCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_1715
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._MITC-000114
________X_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: PNG_153 RUQ_1289

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._MATINA_1_/6 RUQ_1715

62.5 %
60 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._MATINA_1_/6 RUQ_1715

50 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._MATINA_1_/6 MITC-000114

50 %
17 shared markers

USDA-SHRS, United States of America
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1237 10TcSNP1230
11TcSNP1205 12TcSNP1144 13TcSNP1112 14TcSNP1062 15TcSNP1053
16TcSNP1019 17TcSNP1010 18TcSNP999 19TcSNP998 20TcSNP945
21TcSNP899 22TcSNP872 23TcSNP836 24TcSNP835 25TcSNP823
26TcSNP800 27TcSNP739 28TcSNP731 29TcSNP723 30TcSNP702
31TcSNP660 32TcSNP645 33TcSNP644 34TcSNP642 35TcSNP640
36TcSNP602 37TcSNP591 38TcSNP589 39TcSNP577 40TcSNP546
41TcSNP529 42TcSNP522 43TcSNP519 44TcSNP421 45TcSNP363
46TcSNP329 47TcSNP305 48TcSNP290 49TcSNP230 50TcSNP194
51TcSNP189 52TcSNP176 53TcSNP144 54TcSNP143 55TcSNP131
56TcSNP52 57TcSNP49 58TcSNP33 59TcSNP19 60TcSNP13