SNP Profiles of POUND 18 [POU] View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AT	TT	CG	AG	AG	TT	GT	GT	AA	GG	CC	CC	GG	CC
1._RUQ_874	AT	TT	CG	AG	AG	TT	GT	GT	AA	GG	CC	CC	GG	CC
2._RUQ_874	__	__	CG	__	__	__	__	GT	__	__	__	__	__	__
3._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
4._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
5._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
6._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
7._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
8._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
9._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
10._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
11._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
12._RUQ_874	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
13._POUND_18	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
14._GC-08-064-1-86	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
15._GC-08-064-1-86	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
16._GC-08-064-1-86	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
17._GC-08-064-1-86	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
18._GC-08-064-1-86	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
19._GC-08-064-1-86	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
20._GC-08-064-1-86	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
21._GC-08-064-1-86	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
22._GC-08-064-1-86	__	__	CG	__	__	__	__	GT	__	__	CC	__	GG	__
23._GC-08-64-1-86	__	__	CG	__	__	__	__	AC	__	__	__	__	GG	__
24._RUQ_874	__	__	CG	__	__	__	__	AC	__	__	__	__	GG	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CC	AA	CC	GG	CC	CT	AT	AC	TT	CT	GG	GG
1._RUQ_874	AA	CC	CC	AA	CC	GG	CC	CT	AT	AC	TT	CT	GG	GG
2._RUQ_874	__	__	CC	AA	__	__	CC	__	__	AC	__	__	GG	GG
3._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
4._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
5._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
6._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
7._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
8._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
9._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
10._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
11._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
12._RUQ_874	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
13._POUND_18	__	__	__	AA	__	__	CC	__	__	__	__	__	__	GG
14._GC-08-064-1-86	__	__	CC	AA	__	GG	CC	CG	__	AC	__	__	GG	GG
15._GC-08-064-1-86	__	__	CC	AA	__	GG	CC	CG	__	AC	__	__	GG	GG
16._GC-08-064-1-86	__	__	CC	AA	__	GG	CC	CG	__	AC	__	__	GG	GG
17._GC-08-064-1-86	__	__	CC	AA	__	GG	CC	CG	__	AC	__	__	GG	GG
18._GC-08-064-1-86	__	__	CC	AA	__	GG	CC	CG	__	AC	__	__	GG	GG
19._GC-08-064-1-86	__	__	CC	AA	__	GG	CC	CG	__	AC	__	__	GG	GG
20._GC-08-064-1-86	__	__	CC	AA	__	GG	CC	CG	__	AC	__	__	GG	GG
21._GC-08-064-1-86	__	__	CC	AA	__	GG	CC	CG	__	AC	__	__	GG	GG
22._GC-08-064-1-86	__	__	CC	AA	__	GG	CC	CG	__	AC	__	__	GG	GG
23._GC-08-64-1-86	__	__	__	AA	__	GG	GG	CG	__	AC	__	__	GG	CC
24._RUQ_874	__	__	__	AA	__	GG	GG	CG	__	AC	__	__	GG	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	TT	CG	AA	CC	AG	TT	CC	AC	TT	GG	AG	AC	CC	AA
1._RUQ_874	TT	CG	AA	CC	AG	TT	CC	AC	TT	GG	AG	AC	CC	AA
2._RUQ_874	TT	__	__	__	__	__	CC	AC	__	GG	__	AC	__	__
3._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
4._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
5._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
6._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
7._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
8._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
9._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
10._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
11._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
12._RUQ_874	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
13._POUND_18	__	__	AA	__	__	__	__	AC	__	GG	__	AC	__	__
14._GC-08-064-1-86	CC	__	AA	__	__	__	CC	AC	__	GG	__	AC	__	__
15._GC-08-064-1-86	CC	__	AA	__	__	__	CC	AC	__	GG	__	AC	__	__
16._GC-08-064-1-86	CC	__	AA	__	__	__	CC	AC	__	GG	__	AC	__	__
17._GC-08-064-1-86	CC	__	AA	__	__	__	CC	AC	__	GG	__	AC	__	__
18._GC-08-064-1-86	CC	__	AA	__	__	__	CC	AC	__	GG	__	AC	__	__
19._GC-08-064-1-86	CC	__	AA	__	__	__	CC	AC	__	GG	__	AC	__	__
20._GC-08-064-1-86	CC	__	AA	__	__	__	CC	AC	__	GG	__	AC	__	__
21._GC-08-064-1-86	CC	__	AA	__	__	__	CC	AC	__	GG	__	AC	__	__
22._GC-08-064-1-86	CC	__	AA	__	__	__	CC	AC	__	GG	__	AC	__	__
23._GC-08-64-1-86	__	__	__	__	__	__	GG	AC	__	GG	__	AC	__	__
24._RUQ_874	__	__	__	__	__	__	GG	AC	__	GG	__	AC	__	__

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	AA	AG	AA	TT	AA	GT	AG	CC	AC	AT	GT	GG	CC
1._RUQ_874	CC	AA	AG	AA	TT	AA	GT	AG	CC	AC	AT	GT	GG	CC
2._RUQ_874	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
3._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
4._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
5._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
6._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
7._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
8._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
9._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
10._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
11._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
12._RUQ_874	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
13._POUND_18	__	__	__	__	__	AA	__	__	__	AC	__	__	__	__
14._GC-08-064-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
15._GC-08-064-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
16._GC-08-064-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
17._GC-08-064-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
18._GC-08-064-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
19._GC-08-064-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
20._GC-08-064-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
21._GC-08-064-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
22._GC-08-064-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
23._GC-08-64-1-86	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__
24._RUQ_874	__	__	AG	__	__	AA	__	__	__	AC	__	__	__	__

	57	58	59
_Input profile	TT	CC	CT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_874	TT	CC	CT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_874	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._RUQ_874	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._POUND_18	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
14._GC-08-064-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
15._GC-08-064-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
16._GC-08-064-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
17._GC-08-064-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
18._GC-08-064-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
19._GC-08-064-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
20._GC-08-064-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
21._GC-08-064-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
22._GC-08-064-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
23._GC-08-64-1-86	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
24._RUQ_874	__	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: POUND_18 RUQ_874B

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._POUND_18 RUQ_874

identical
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

2._POUND_18 RUQ_874

identical
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._POUND_18

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 4

Dapeng Zhang, 2016

4._POUND_18

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 2 > FP

Dapeng Zhang, 2016

5._POUND_18

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 12

Dapeng Zhang, 2016

6._POUND_18

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 11

Dapeng Zhang, 2016

7._POUND_18

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 9

Dapeng Zhang, 2016

8._POUND_18

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 7

Dapeng Zhang, 2016

9._POUND_18

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 6

Dapeng Zhang, 2016

10._POUND_18

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 3

Dapeng Zhang, 2016

11._POUND_18

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8186 1

Dapeng Zhang, 2016

12._POUND_18 RUQ_874

identical
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

13._POUND_18

identical
13 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F447 T2

Dapeng Zhang, 2016

14._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

15._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

16._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

17._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

18._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

19._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

20._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

21._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

22._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

23._POUND_18 GC-08-64-1-86

70.6 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 8, Block: 1, Rep: 86, Tree: 1

Notes: MCCS_Structure_refs_above_0.9membership

24._POUND_18 RUQ_874

70.6 %
17 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP1527	2	TcSNP1524	3	TcSNP1458	4	TcSNP1404	5	TcSNP1401
6	TcSNP1293	7	TcSNP1275	8	TcSNP1253	9	TcSNP1230	10	TcSNP1205
11	TcSNP1144	12	TcSNP1112	13	TcSNP1062	14	TcSNP1053	15	TcSNP1019
16	TcSNP1010	17	TcSNP999	18	TcSNP998	19	TcSNP945	20	TcSNP899
21	TcSNP872	22	TcSNP836	23	TcSNP835	24	TcSNP823	25	TcSNP800
26	TcSNP739	27	TcSNP731	28	TcSNP723	29	TcSNP702	30	TcSNP660
31	TcSNP645	32	TcSNP644	33	TcSNP642	34	TcSNP640	35	TcSNP602
36	TcSNP591	37	TcSNP589	38	TcSNP577	39	TcSNP546	40	TcSNP529
41	TcSNP522	42	TcSNP519	43	TcSNP421	44	TcSNP363	45	TcSNP329
46	TcSNP305	47	TcSNP290	48	TcSNP230	49	TcSNP194	50	TcSNP189
51	TcSNP176	52	TcSNP144	53	TcSNP143	54	TcSNP131	55	TcSNP52
56	TcSNP49	57	TcSNP33	58	TcSNP19	59	TcSNP13