SNP Profiles of PA 124 [PER]   View Data

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCCGGGAGTTGGTTAAGGCCCCAGCCAA
1._RUQ_1576
__CG________TT______________
2._RUQ_1576
__CG________AA________AG____
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTCTAGCCGGGGTTAAAATTCTAGGGCT
1._RUQ_1576
__CCAG__GGGG____AA____AGGGCT
2._RUQ_1576
____AG__GGCCGG__AA____AGCC__
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
CGAACCGGCCTTCCAACGAGAACCACCT
1._RUQ_1576
__________TTCC__CG__AA______
2._RUQ_1576
__________AACC__CG__AA______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAGGAATTGGGTGGCCACATGTGGCCCC
1._RUQ_1576
__GG____GG______AC__________
2._RUQ_1576
__GG____GG______AC__________
 57 58 59            
_Input profile
CCTTTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_1576
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_1576
______X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: PA_124_[PER] RUQ_1576

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._PA_124_[PER] RUQ_1576

97.1 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._PA_124_[PER] RUQ_1576

70.6 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1524 2TcSNP1458 3TcSNP1404 4TcSNP1401 5TcSNP1293
6TcSNP1275 7TcSNP1253 8TcSNP1230 9TcSNP1205 10TcSNP1144
11TcSNP1112 12TcSNP1062 13TcSNP1053 14TcSNP1019 15TcSNP1010
16TcSNP999 17TcSNP998 18TcSNP945 19TcSNP899 20TcSNP872
21TcSNP836 22TcSNP835 23TcSNP823 24TcSNP800 25TcSNP739
26TcSNP731 27TcSNP723 28TcSNP702 29TcSNP660 30TcSNP645
31TcSNP644 32TcSNP642 33TcSNP640 34TcSNP602 35TcSNP591
36TcSNP589 37TcSNP577 38TcSNP546 39TcSNP529 40TcSNP522
41TcSNP519 42TcSNP421 43TcSNP363 44TcSNP329 45TcSNP305
46TcSNP290 47TcSNP230 48TcSNP194 49TcSNP189 50TcSNP176
51TcSNP144 52TcSNP143 53TcSNP131 54TcSNP52 55TcSNP49
56TcSNP33 57TcSNP19 58TcSNP13 59TcSNP1527