| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | TT | TT | GG | GG | GG | TT | TT | TT | AC | TT | TT | TT | AA | CT |
1._RUQ_1531 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | __ | __ | __ | __ |
2._GC-05-137-3-39 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
3._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
4._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
5._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
6._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
7._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
8._GC-05-138-3-40 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
9._GC-05-138-3-40 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
10._GC-05-138-3-40 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
11._GC-05-138-3-40 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
12._GC-05-138-3-40 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | TT | __ | AA | __ |
13._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | __ | __ | GG | __ |
14._GC-05-137-3-39 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
15._GC-05-137-3-39 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
16._GC-05-137-3-39 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
17._GC-05-137-3-39 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
18._RUQ_1531 | AT | CT | GG | GG | GG | TT | GG | TT | AA | GG | CC | CT | GG | CC |
19._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
20._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
21._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
22._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
23._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
24._RUQ_1531 | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
25._PA_156_[PER] | __ | __ | GG | __ | __ | __ | __ | TT | __ | __ | CC | __ | GG | __ |
26._PA156[PER] | __ | __ | CC | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ | __ |
27._RUQ_1531 | __ | __ | CC | __ | __ | __ | __ | AA | __ | __ | __ | __ | GG | __ |
| 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | AA | TT | TT | AG | CG | AA | GG | TT | AA | AC | CT | CT | GG | GT |
1._RUQ_1531 | __ | __ | __ | AG | __ | GG | GG | __ | __ | AC | __ | __ | GG | GG |
2._GC-05-137-3-39 | __ | __ | CT | AG | __ | AG | GG | __ | __ | AC | __ | __ | GG | GG |
3._PA_156_[PER] | __ | __ | __ | AG | __ | __ | CG | __ | __ | __ | __ | __ | __ | GG |
4._PA_156_[PER] | __ | __ | __ | AG | __ | __ | CG | __ | __ | __ | __ | __ | __ | GG |
5._PA_156_[PER] | __ | __ | __ | AG | __ | __ | CG | __ | __ | __ | __ | __ | __ | GG |
6._PA_156_[PER] | __ | __ | __ | AG | __ | __ | CG | __ | __ | __ | __ | __ | __ | GG |
7._PA_156_[PER] | __ | __ | __ | AG | __ | __ | CG | __ | __ | __ | __ | __ | __ | GG |
8._GC-05-138-3-40 | __ | __ | TT | AG | __ | AA | CG | GG | __ | AA | __ | __ | GG | GG |
9._GC-05-138-3-40 | __ | __ | TT | AG | __ | AA | CG | GG | __ | AA | __ | __ | GG | GG |
10._GC-05-138-3-40 | __ | __ | TT | AG | __ | AA | CG | GG | __ | AA | __ | __ | GG | GG |
11._GC-05-138-3-40 | __ | __ | TT | AG | __ | AA | CG | GG | __ | AA | __ | __ | GG | GG |
12._GC-05-138-3-40 | __ | __ | TT | AG | __ | AA | CG | GG | __ | AA | __ | __ | GG | GG |
13._PA_156_[PER] | __ | __ | __ | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | GG |
14._GC-05-137-3-39 | __ | __ | CT | AG | __ | AG | GG | CC | __ | AC | __ | __ | GG | GG |
15._GC-05-137-3-39 | __ | __ | CT | AG | __ | AG | GG | CC | __ | AC | __ | __ | GG | GG |
16._GC-05-137-3-39 | __ | __ | CT | AG | __ | AG | GG | CC | __ | AC | __ | __ | GG | GG |
17._GC-05-137-3-39 | __ | __ | CT | AG | __ | AG | GG | CC | __ | AC | __ | __ | GG | GG |
18._RUQ_1531 | AA | CT | CT | AG | CC | AG | GG | TT | AA | AC | TT | TT | GG | GG |
19._PA_156_[PER] | __ | __ | __ | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | GG |
20._PA_156_[PER] | __ | __ | __ | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | GG |
21._PA_156_[PER] | __ | __ | __ | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | GG |
22._PA_156_[PER] | __ | __ | __ | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | GG |
23._PA_156_[PER] | __ | __ | __ | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | GG |
24._RUQ_1531 | __ | __ | __ | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | GG |
25._PA_156_[PER] | __ | __ | __ | AG | __ | __ | GG | __ | __ | __ | __ | __ | __ | GG |
26._PA156[PER] | __ | __ | __ | __ | __ | __ | CC | __ | __ | __ | __ | __ | __ | __ |
27._RUQ_1531 | __ | __ | __ | AG | __ | AG | CC | GG | __ | AC | __ | __ | GG | CC |
| 29 | 30 | 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | 41 | 42 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CT | GG | AG | CG | AG | TT | TT | CC | AA | CC | AA | CC | CT | AC |
1._RUQ_1531 | CT | __ | __ | __ | __ | __ | TT | CC | __ | CG | __ | AC | __ | __ |
2._GC-05-137-3-39 | CT | __ | AA | __ | __ | __ | TT | CC | __ | CG | __ | AC | __ | __ |
3._PA_156_[PER] | __ | __ | AG | __ | __ | __ | __ | AA | __ | CG | __ | CC | __ | __ |
4._PA_156_[PER] | __ | __ | AG | __ | __ | __ | __ | AA | __ | CG | __ | CC | __ | __ |
5._PA_156_[PER] | __ | __ | AG | __ | __ | __ | __ | AA | __ | CG | __ | CC | __ | __ |
6._PA_156_[PER] | __ | __ | AG | __ | __ | __ | __ | AA | __ | CG | __ | CC | __ | __ |
7._PA_156_[PER] | __ | __ | AG | __ | __ | __ | __ | AA | __ | CG | __ | CC | __ | __ |
8._GC-05-138-3-40 | CC | __ | AG | __ | __ | __ | CT | AA | __ | CG | __ | CC | __ | __ |
9._GC-05-138-3-40 | CC | __ | AG | __ | __ | __ | CT | AA | __ | CG | __ | CC | __ | __ |
10._GC-05-138-3-40 | CC | __ | AG | __ | __ | __ | CT | AA | __ | CG | __ | CC | __ | __ |
11._GC-05-138-3-40 | CC | __ | AG | __ | __ | __ | CT | AA | __ | CG | __ | CC | __ | __ |
12._GC-05-138-3-40 | CC | __ | AG | __ | __ | __ | CT | AA | __ | CG | __ | CC | __ | __ |
13._PA_156_[PER] | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AC | __ | __ |
14._GC-05-137-3-39 | CT | __ | AA | __ | __ | __ | TT | CC | __ | CG | __ | AC | __ | __ |
15._GC-05-137-3-39 | CT | __ | AA | __ | __ | __ | TT | CC | __ | CG | __ | AC | __ | __ |
16._GC-05-137-3-39 | CT | __ | AA | __ | __ | __ | TT | CC | __ | CG | __ | AC | __ | __ |
17._GC-05-137-3-39 | CT | __ | AA | __ | __ | __ | TT | CC | __ | CG | __ | AC | __ | __ |
18._RUQ_1531 | CT | CG | AA | CC | GG | CC | TT | CC | AA | CG | AG | AC | CT | AA |
19._PA_156_[PER] | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AC | __ | __ |
20._PA_156_[PER] | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AC | __ | __ |
21._PA_156_[PER] | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AC | __ | __ |
22._PA_156_[PER] | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AC | __ | __ |
23._PA_156_[PER] | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AC | __ | __ |
24._RUQ_1531 | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AC | __ | __ |
25._PA_156_[PER] | __ | __ | AA | __ | __ | __ | __ | CC | __ | CG | __ | AC | __ | __ |
26._PA156[PER] | __ | __ | __ | __ | __ | __ | TT | CC | __ | CG | __ | __ | __ | __ |
27._RUQ_1531 | __ | __ | __ | __ | __ | __ | AA | CC | __ | CG | __ | AC | __ | __ |
| 43 | 44 | 45 | 46 | 47 | 48 | 49 | 50 | 51 | 52 | 53 | 54 | 55 | 56 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | CT | AC | GG | AC | TT | AG | TT | GG | CC | AT | GT | TT | AC | CT |
1._RUQ_1531 | __ | __ | GG | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
2._GC-05-137-3-39 | __ | __ | GG | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
3._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
4._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
5._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
6._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
7._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
8._GC-05-138-3-40 | __ | __ | GG | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
9._GC-05-138-3-40 | __ | __ | GG | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
10._GC-05-138-3-40 | __ | __ | GG | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
11._GC-05-138-3-40 | __ | __ | GG | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
12._GC-05-138-3-40 | __ | __ | GG | __ | __ | AA | __ | __ | AA | __ | __ | __ | __ | __ |
13._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
14._GC-05-137-3-39 | __ | __ | GG | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
15._GC-05-137-3-39 | __ | __ | GG | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
16._GC-05-137-3-39 | __ | __ | GG | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
17._GC-05-137-3-39 | __ | __ | GG | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
18._RUQ_1531 | CC | AA | GG | AA | CT | AA | GG | GG | AC | TT | GT | GG | CC | CC |
19._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
20._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
21._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
22._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
23._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
24._RUQ_1531 | __ | __ | __ | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
25._PA_156_[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
26._PA156[PER] | __ | __ | __ | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
27._RUQ_1531 | __ | __ | GG | __ | __ | AA | __ | __ | AC | __ | __ | __ | __ | __ |
| 57 | 58 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
_Input profile | AC | TT | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
1._RUQ_1531 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
2._GC-05-137-3-39 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
3._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
4._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
5._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
6._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
7._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
8._GC-05-138-3-40 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
9._GC-05-138-3-40 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
10._GC-05-138-3-40 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
11._GC-05-138-3-40 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
12._GC-05-138-3-40 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
13._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
14._GC-05-137-3-39 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
15._GC-05-137-3-39 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
16._GC-05-137-3-39 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
17._GC-05-137-3-39 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
18._RUQ_1531 | CC | TT | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
19._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
20._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
21._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
22._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
23._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
24._RUQ_1531 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
25._PA_156_[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
26._PA156[PER] | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
27._RUQ_1531 | __ | __ | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X | X_X |
| 1 | TcSNP1527 | 2 | TcSNP1524 | 3 | TcSNP1458 | 4 | TcSNP1404 | 5 | TcSNP1401 |
| 6 | TcSNP1293 | 7 | TcSNP1275 | 8 | TcSNP1253 | 9 | TcSNP1230 | 10 | TcSNP1205 |
| 11 | TcSNP1144 | 12 | TcSNP1112 | 13 | TcSNP1062 | 14 | TcSNP1053 | 15 | TcSNP1019 |
| 16 | TcSNP1010 | 17 | TcSNP999 | 18 | TcSNP998 | 19 | TcSNP945 | 20 | TcSNP899 |
| 21 | TcSNP872 | 22 | TcSNP836 | 23 | TcSNP835 | 24 | TcSNP823 | 25 | TcSNP800 |
| 26 | TcSNP739 | 27 | TcSNP731 | 28 | TcSNP723 | 29 | TcSNP702 | 30 | TcSNP660 |
| 31 | TcSNP645 | 32 | TcSNP644 | 33 | TcSNP642 | 34 | TcSNP640 | 35 | TcSNP602 |
| 36 | TcSNP591 | 37 | TcSNP589 | 38 | TcSNP577 | 39 | TcSNP546 | 40 | TcSNP529 |
| 41 | TcSNP522 | 42 | TcSNP519 | 43 | TcSNP421 | 44 | TcSNP363 | 45 | TcSNP329 |
| 46 | TcSNP305 | 47 | TcSNP290 | 48 | TcSNP230 | 49 | TcSNP194 | 50 | TcSNP189 |
| 51 | TcSNP144 | 52 | TcSNP143 | 53 | TcSNP131 | 54 | TcSNP52 | 55 | TcSNP49 |
| 56 | TcSNP33 | 57 | TcSNP19 | 58 | TcSNP13 |