SNP Profiles of IMC 105   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTGGTTGGCTCCCCAACGGGCTAAACCT
1._RUQ_863
__GGTT______CCAA________AC__
2._RUQ_863
__CCAA________AA__GGCC__AC__
3._IMC_105_Fld#_181_Plt#_2
__CCAA________AA__GGCC__AC__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AGTTCGAAAGTTACATAAACCCACAGAC
1._RUQ_863
AGTT________AC____AC____AG__
2._RUQ_863
AG__________AC____AC____AG__
3._IMC_105_Fld#_181_Plt#_2
AG__________AC____AC____AG__
 29 30 31 32 33 34 35 36 37      
_Input profile
TTGGAGCTCCATCCCCCTX_XX_XX_XX_XX_X
1._RUQ_863
________CC________X_XX_XX_XX_XX_X
2._RUQ_863
________CC________X_XX_XX_XX_XX_X
3._IMC_105_Fld#_181_Plt#_2
________CC________X_XX_XX_XX_XX_X

Input profile: IMC_105 RUQ_863

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._IMC_105 RUQ_863

identical
11 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._IMC_105 RUQ_863

77.3 %
11 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._IMC_105 IMC_105_Fld#_181_Plt#_2

77.3 %
11 shared markers

USDA-TARS, United States of America
Location: Field: 181, Tree: 2
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1524 2TcSNP1458 3TcSNP1253 4TcSNP1205 5TcSNP1112
6TcSNP1053 7TcSNP999 8TcSNP998 9TcSNP945 10TcSNP899
11TcSNP836 12TcSNP835 13TcSNP823 14TcSNP739 15TcSNP731
16TcSNP702 17TcSNP660 18TcSNP645 19TcSNP642 20TcSNP640
21TcSNP591 22TcSNP589 23TcSNP546 24TcSNP529 25TcSNP522
26TcSNP363 27TcSNP329 28TcSNP305 29TcSNP290 30TcSNP194
31TcSNP189 32TcSNP176 33TcSNP144 34TcSNP143 35TcSNP49
36TcSNP19 37TcSNP13