SNP Profiles of C SUL 7   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1._C SUL 7___
CGGTATAGCCCTCCCTACGGTTATAG___
2._C SUL 7___
CGGTATAGCCCTCCCTACGGTTATAGAC
3._C SUL 7___
CGGTATAGCCCTCCCTACGGTTATAGAC
4._C SUL 7___
CGGTATAGCCCTCCCTACGGTTATAGAC
5._C SUL 7___
CGGTATAGCCCTCCCTACGGTTATAGAC
6._C SUL 7___
GGGGAAAGCCTTCCTTACGGTTTTGGCC
7._C SUL 7___
GGGGAAAGCCTTCCTTACGGTTTTGGCC
8._C SUL 7___
GGGGAAAGCCTTCCTTACGGTTTTGGCC
9._C SUL 7___
GGGGAAAGCCTTCCTTACGGTTTTGGCC
10._C SUL 7___
GGGGAAAGCCTTCCTTACGGTTTTGGCC
11._C SUL 7___
GG___AA_______________ACGGTT______CC
12._C SUL 7___
GG___AA_______________ACGGTT______CC
13._C SUL 7___
GG___AA_______________ACGGTT______CC
14._C SUL 7___
GG___AA_______________ACGGTT______CC
15._C SUL 7___
GG___AA_______________ACGGTT______CC
16._C SUL 7___
CG___AT_______________ACGGTT_________
17._C SUL 7___
CG___AT_______________ACGGTT______AC
18._C SUL 7___
CG___AT_______________ACGGTT______AC
19._C SUL 7___
CG___AT_______________ACGGTT______AC
20._C SUL 7___
CG___AT_______________ACGGTT______AC
21._C SUL 7___
CG___AT_______________CCGTCT______CC
22._C SUL 7___
GG___AA_______________ACGGTT______CC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1._C SUL 7___
CGAAGGCTAAAAAGAACCAAGGATCGGG
2._C SUL 7___
CGAAGGCTAAAAAGAACCAAGGATCGGG
3._C SUL 7___
CGAAGGCTAAAAAGAACCAAGGATCGGG
4._C SUL 7___
CGAAGGCTAAAAAGAACCAAGGATCGGG
5._C SUL 7___
CGAAGGCTAAAAAGAACCAAGGATCGGG
6._C SUL 7___
CGAAGGCTATGGGGAACCAAGGAAGGGG
7._C SUL 7___
CGAAGGCTATGGGGAACCAAGGAAGGGG
8._C SUL 7___
CGAAGGCTATGGGGAACCAAGGAAGGGG
9._C SUL 7___
CGAAGGCTATGGGGAACCAAGGAAGGGG
10._C SUL 7___
CGAAGGCTATGGGGAACCAAGGAAGGGG
11._C SUL 7___
CGAA___CT_________AA______GG______GG
12._C SUL 7___
CGAA___CT_________AA______GG______GG
13._C SUL 7___
CGAA___CT_________AA______GG______GG
14._C SUL 7___
CGAA___CT_________AA______GG______GG
15._C SUL 7___
CGAA___CT_________AA______GG______GG
16._C SUL 7___
CGAA___CT_________AA______GG______GG
17._C SUL 7___
CGAA___CT_________AA______GG______GG
18._C SUL 7___
CGAA___CT_________AA______GG______GG
19._C SUL 7___
CGAA___CT_________AA______GG______GG
20._C SUL 7___
CGAA___CT_________AA______GG______GG
21._C SUL 7___
CGAA___CC_________AT______GG______AG
22._C SUL 7___
CGAA___CT_________AA______GG______GG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1._C SUL 7___
ACACCTAGGGAGCCAC___AGCTAGAGAG
2._C SUL 7___
ACACCTAGGGAGCCACCCAGCTAGAGAG
3._C SUL 7___
ACACCTAGGGAGCCACCCAGCTAGAGAG
4._C SUL 7___
ACACCTAGGGAGCCACCCAGCTAGAGAG
5._C SUL 7___
ACACCTAGGGAGCCACCCAGCTAGAGAG
6._C SUL 7___
AAACCCAAGGGGCCCCCCAACCAAAAAA
7._C SUL 7___
AAACCCAAGGGGCCCCCCAACCAAAAAA
8._C SUL 7___
AAACCCAAGGGGCCCCCCAACCAAAAAA
9._C SUL 7___
AAACCCAAGGGGCCCCCCAACCAAAAAA
10._C SUL 7___
AAACCCAAGGGGCCCCCCAACCAAAAAA
11._C SUL 7___
___ACCC___GG___CCCC______CCAA______
12._C SUL 7___
___ACCC___GG___CCCC______CCAA______
13._C SUL 7___
___ACCC___GG___CCCC______CCAA______
14._C SUL 7___
___ACCC___GG___CCCC______CCAA______
15._C SUL 7___
___ACCC___GG___CCCC______CCAA______
16._C SUL 7___
___ACCT___GG___CCAC______CTAG______
17._C SUL 7___
___ACCT___GG___CCAC______CTAG______
18._C SUL 7___
___ACCT___GG___CCAC______CTAG______
19._C SUL 7___
___ACCT___GG___CCAC______CTAG______
20._C SUL 7___
___ACCT___GG___CCAC______CTAG______
21._C SUL 7___
___ACCT___GT___CGCC______TTAG______
22._C SUL 7___
___ACCC___GG___CCCC______CCAG______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1._C SUL 7___
CTTTGGAATTGGGTCCCGAACGCGCTCG
2._C SUL 7___
CTTTGGAATTGGGTCCCGAACGCGCTCG
3._C SUL 7___
CTTTGGAATTGGGTCCCGAACGCGCTCG
4._C SUL 7___
CTTTGGAATTGGGTCCCGAACGCGCTCG
5._C SUL 7___
CTTTGGAATTGGGTCCCGAACGCGCTCG
6._C SUL 7___
CCCTGTAATTGGTTAAGGAACGCGTTCC
7._C SUL 7___
CCCTGTAATTGGTTAAGGAACGCGTTCC
8._C SUL 7___
CCCTGTAATTGGTTAAGGAACGCGTTCC
9._C SUL 7___
CCCTGTAATTGGTTAAGGAACGCGTTCC
10._C SUL 7___
CCCTGTAATTGGTTAAGGAACGCGTTCC
11._C SUL 7___
______GT_____________________CG___TT___
12._C SUL 7___
______GT_____________________CG___TT___
13._C SUL 7___
______GT_____________________CG___TT___
14._C SUL 7___
______GT_____________________CG___TT___
15._C SUL 7___
______GT_____________________CG___TT___
16._C SUL 7___
______GG_____________________CG___CT___
17._C SUL 7___
______GG_____________________CG___CT___
18._C SUL 7___
______GG_____________________CG___CT___
19._C SUL 7___
______GG_____________________CG___CT___
20._C SUL 7___
______GG_____________________CG___CT___
21._C SUL 7___
______GG_____________________GG___CT___
22._C SUL 7___
______GT_____________________CG___TT___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1._C SUL 7___
AGCTCGCTATCCAACCTTCGCTAGGTAA
2._C SUL 7___
AGCTCGCTATCCAACCTTCGCTAGGTAA
3._C SUL 7___
AGCTCGCTATCCAACCTTCGCTAGGTAA
4._C SUL 7___
AGCTCGCTATCCAACCTTCGCTAGGTAA
5._C SUL 7___
AGCTCGCTATCCAACCTTCGCTAGGTAA
6._C SUL 7___
GGCTGGCCATCCAACCTTCCCCGGGGAA
7._C SUL 7___
GG___GGCCAT___AACCTTCCCCGGGGAA
8._C SUL 7___
GGCTGGCCATCCAACCTTCCCCGGGGAA
9._C SUL 7___
GGCTGGCCATCCAACCTTCCCCGGGGAA
10._C SUL 7___
GGCTGGCCATCCAACCTTCCCCGGGGAA
11._C SUL 7___
___CTGG___ATCCAA_________CCGG___AA
12._C SUL 7___
______GG___AT___AA_________CCGG___AA
13._C SUL 7___
___CTGG___ATCCAA_________CCGG___AA
14._C SUL 7___
___CTGG___ATCCAA_________CCGG___AA
15._C SUL 7___
___CTGG___ATCCAA_________CCGG___AA
16._C SUL 7___
___CTCG___ATCCAA_________CTAG___AA
17._C SUL 7___
___CTCG___ATCCAA_________CTAG___AA
18._C SUL 7___
___CTCG___ATCCAA_________CTAG___AA
19._C SUL 7___
___CTCG___ATCCAA_________CTAG___AA
20._C SUL 7___
___CTCG___ATCCAA_________CTAG___AA
21._C SUL 7___
___CTGG___ATTTAG_________CCAG___AT
22._C SUL 7___
___CTGG___ATCCAA_________CCGG___AA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1._C SUL 7___
CTGGATCCCTCTCTGTACGGCC______AG
2._C SUL 7___
CTGGATCCCTCTCTGTACGGCC______AG
3._C SUL 7___
CTGGATCCCTCTCTGTACGGCC______AG
4._C SUL 7___
CTGGATCCCTCTCTGTACGGCC______AG
5._C SUL 7___
CTGGATCCCTCTCTGTACGGCC______AG
6._C SUL 7___
TTAGTTCCTTCCCTTTACGGTTTTACGG
7._C SUL 7___
TTAGTTCCTTCCCTTTACGGTTTTACGG
8._C SUL 7___
TTAGTTCCTTCCCTTTACGGTTTTACGG
9._C SUL 7___
TTAGTTCCTTCCCTTTACGGTTTTACGG
10._C SUL 7___
TTAGTTCCTTCCCTTTACGGTTTTACGG
11._C SUL 7___
_________CC______CT______GGTT___AC___
12._C SUL 7___
_________CC______CT______GGTT___AC___
13._C SUL 7___
_________CC______CT______GGTT___AC___
14._C SUL 7___
_________CC______CT______GGTT___AC___
15._C SUL 7___
_________CC______CT______GGTT___AC___
16._C SUL 7___
_________CC______CT______GGCC_________
17._C SUL 7___
_________CC______CT______GGCC_________
18._C SUL 7___
_________CC______CT______GGCC_________
19._C SUL 7___
_________CC______CT______GGCC_________
20._C SUL 7___
_________CC______CT______GGCC_________
21._C SUL 7___
_________CT______CT______GTCT___AC___
22._C SUL 7___
_________CC______CT______GGTT___AC___
 85 86 87 88 89 90 91 92 93 94 95    
1._C SUL 7___
CTCTTTCGGGCCCCAGACGGACX_XX_XX_X
2._C SUL 7___
CTCTTTCGGGCCCCAGACGGACX_XX_XX_X
3._C SUL 7___
CTCTTTCGGGCCCCAGACGGACX_XX_XX_X
4._C SUL 7___
CTCTTTCGGGCCCCAGACGGACX_XX_XX_X
5._C SUL 7___
CTCTTTCGGGCCCCAGACGGACX_XX_XX_X
6._C SUL 7___
CCCCCTCCAACCCCGGCCGGCCX_XX_XX_X
7._C SUL 7___
CCCCCTCCAACCCCGGCCGGCCX_XX_XX_X
8._C SUL 7___
CCCCCTCCAACCCCGGCCGGCCX_XX_XX_X
9._C SUL 7___
CCCCCTCCAACCCCGGCCGGCCX_XX_XX_X
10._C SUL 7___
CCCCCTCCAACCCCGGCCGGCCX_XX_XX_X
11._C SUL 7___
CC___CTCCAACC_______________X_XX_XX_X
12._C SUL 7___
CC___CTCCAACC_______________X_XX_XX_X
13._C SUL 7___
CC___CTCCAACC_______________X_XX_XX_X
14._C SUL 7___
CC___CTCCAACC_______________X_XX_XX_X
15._C SUL 7___
CC___CTCCAACC_______________X_XX_XX_X
16._C SUL 7___
CT___TTCGGGCC_______________X_XX_XX_X
17._C SUL 7___
CT___TTCGGGCC_______________X_XX_XX_X
18._C SUL 7___
CT___TTCGGGCC_______________X_XX_XX_X
19._C SUL 7___
CT___TTCGGGCC_______________X_XX_XX_X
20._C SUL 7___
CT___TTCGGGCC_______________X_XX_XX_X
21._C SUL 7___
CT___CTCGAGCT_______________X_XX_XX_X
22._C SUL 7___
CC___CTCCAACC_______________X_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._C_SUL_7 GC-08-261-8-29

Location: Tree: 2
Notes: 2
 Mars, 2018

2._C_SUL_7 GC-08-261-8-29

Location: Tree: 3
Notes: 3
 Mars, 2018

3._C_SUL_7 GC-08-261-8-29

Location: Tree: 4
Notes: 4
 Mars, 2018

4._C_SUL_7 GC-08-261-8-29

Location: Tree: 5
Notes: 5
 Mars, 2018

5._C_SUL_7 GC-08-261-8-29

Location: Tree: 7
Notes: 7
 Mars, 2018

6._C_SUL_7 NA

Location: Tree: 1
Notes: 1
 Mars, 2018

7._C_SUL_7 NA

Location: Tree: 3
Notes: 3
 Mars, 2018

8._C_SUL_7 NA

Location: Tree: 5
Notes: 5
 Mars, 2018

9._C_SUL_7 NA

Location: Tree: 6
Notes: 6
 Mars, 2018

10._C_SUL_7 NA

Location: Tree: 7
Notes: 7
 Mars, 2018

11._C_SUL_7

Location: 8129 1
 Dapeng Zhang, 2016

12._C_SUL_7

Location: 8129 3
 Dapeng Zhang, 2016

13._C_SUL_7

Location: 8129 5
 Dapeng Zhang, 2016

14._C_SUL_7

Location: 8129 6
 Dapeng Zhang, 2016

15._C_SUL_7

Location: 8129 7
 Dapeng Zhang, 2016

16._C_SUL_7

Location: 8829 2
 Dapeng Zhang, 2016

17._C_SUL_7

Location: 8829 3
 Dapeng Zhang, 2016

18._C_SUL_7

Location: 8829 4
 Dapeng Zhang, 2016

19._C_SUL_7

Location: 8829 5
 Dapeng Zhang, 2016

20._C_SUL_7

Location: 8829 7
 Dapeng Zhang, 2016

Centro Agronómico Tropical de Investigación y Enseñanza (CATIE) Costa Rica

21._C_SUL_7

Location: Cabiria
 Dapeng Zhang, 2016

Cocoa Research Institute of Ghana (CRIG) Ghana

22._C_SUL_7

Location: P95 583
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP521 30TcSNP529
31TcSNP534 32TcSNP547 33TcSNP560 34TcSNP561 35TcSNP577
36TcSNP591 37TcSNP602 38TcSNP606 39TcSNP619 40TcSNP645
41TcSNP653 42TcSNP689 43TcSNP701 44TcSNP702 45TcSNP723
46TcSNP731 47TcSNP751 48TcSNP776 49TcSNP799 50TcSNP823
51TcSNP836 52TcSNP860 53TcSNP872 54TcSNP878 55TcSNP891
56TcSNP894 57TcSNP899 58TcSNP917 59TcSNP929 60TcSNP944
61TcSNP953 62TcSNP994 63TcSNP998 64TcSNP999 65TcSNP1034
66TcSNP1041 67TcSNP1060 68TcSNP1062 69TcSNP1063 70TcSNP1075
71TcSNP1096 72TcSNP1111 73TcSNP1126 74TcSNP1144 75TcSNP1149
76TcSNP1156 77TcSNP1165 78TcSNP1175 79TcSNP1242 80TcSNP1253
81TcSNP1270 82TcSNP1309 83TcSNP1350 84TcSNP1383 85TcSNP1414
86TcSNP1439 87TcSNP1442 88TcSNP1458 89TcSNP1484 90TcSNP1520
91Tcm001s00947643 92Tcm002s20575712 93Tcm003s01336581 94Tcm003s07402719 95Tcm006s26664133