SNP Profiles of NA 168   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1._NA 168___
GGGGTTGGCCTTCCTTACGGCTATGGAA
2._NA 168___
GGGGTTGGCCTTCCTTACGG___ATGGAA
3._NA 168___
GGGGTTGGCCTTCCTTACGGCTATGGAA
4._NA 168___
GGGGTTGGCCTTCCTTACGGCTATGGAA
5._NA 168___
GGGGATGGCCTTCCCTACGGCTTTGGAA
6._NA 168___
GGGGTTGGCCTTCCTTACGGCTATGGAA
7._NA 168___
GGGGTTGGCCTTCCTTACGGCTATGGAA
8._NA 168___
GGGGATGGCCTTCCCTACGG___TTGGAA
9._NA 168___
GG___AT_______________ACGGCT______AA
10._NA 168___
GG___AT_______________ACGG_________AA
11._NA 168___
GG___TT_______________ACGGCT______AA
12._NA 168___
GG___TT_______________ACGGCT______AA
13._NA 168___
GG___TT_______________ACGGCT______AA
14._NA 168___
GG___TT_______________ACGG_________AA
15._NA 168___
GG___TT_______________ACGGCT______AA
16._NA 168___
GG___TT_______________ACGGCT______AA
17._NA 168___
GG___AT_______________ACGGCT______AA
18._NA 168___
GG___AT_______________AAGGCC______AC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1._NA 168___
CCAGGGCTAAGGGGATTTGGGGAA___AG
2._NA 168___
CCAGGGCTAAGGGGATTTGGGGAACCAG
3._NA 168___
CCAGGGCTAAGGGGATTTGGGGAACCAG
4._NA 168___
CCAGGGCTAAGGGGATTTGGGGAACCAG
5._NA 168___
GGAAGGCCATGGGGAACTGGGGATCGAG
6._NA 168___
CCAGGGCTAAGGGGATTTGGGGAACCAG
7._NA 168___
CCAGGGCTAAGGGGATTTGGGGAACCAG
8._NA 168___
___AAGGCCATGGGGAACTGGGGATCGAG
9._NA 168___
GGAA___CC_________AA______GG______AG
10._NA 168___
___AA___CC_________AA______GG______AG
11._NA 168___
CCAG___CT_________AT______GG______AG
12._NA 168___
CCAG___CT_________AT______GG______AG
13._NA 168___
CCAG___CT_________AT______GG______AG
14._NA 168___
CCAG___CT_________AT______GG______AG
15._NA 168___
CCAG___CT_________AT______GG______AG
16._NA 168___
CCAG___CT_________AT______GG______AG
17._NA 168___
GGAA___CC_________AA______GG______AG
18._NA 168___
___AA___CC_________AA______GG______AG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1._NA 168___
AACCCCAAGTGGGGAACCAACCAAAAAA
2._NA 168___
AACCCCAAGTGGGGAACCAACCAAAAAA
3._NA 168___
AACCCCAAGTGGGGAACCAACCAAAAAA
4._NA 168___
AACCCCAAGTGGGGAACCAACCAAAAAA
5._NA 168___
ACCCCTGGGTGGGGACCCAGCCAAAAAA
6._NA 168___
AACCCCAAGTGGGGAACCAACCAAAAAA
7._NA 168___
AACCCCAAGTGGGGAACCAACCAAAAAA
8._NA 168___
ACCCCTGGGTGGGGACCCAGCCAAAAAA
9._NA 168___
___CCCT___GT___GGAC______CCAA______
10._NA 168___
___CCCT___GT___GGAC______CCAA______
11._NA 168___
___CCCC___GT___GGAA______CCAA______
12._NA 168___
___CCCC___GT___GGAA______CCAA______
13._NA 168___
___CCCC___GT___GGAA______CCAA______
14._NA 168___
___CCCC___GT___GGAA______CCAA______
15._NA 168___
___CCCC___GT___GGAA______CCAA______
16._NA 168___
___CCCC___GT___GGAA______CCAA______
17._NA 168___
___CCCT___GT___GGAC______CCAA______
18._NA 168___
___CCTT___GT___GGAA______CCAA______
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1._NA 168___
TTCCGGGGTTGTTTACGG___CCCCCTCC
2._NA 168___
TTCCGGGGTTGTTTACGG___CCCCCTCC
3._NA 168___
TTCCGGGGTTGTTTACGG___CCCCCTCC
4._NA 168___
TTCCGGGGTTGTTTACGG___CCCCCTCC
5._NA 168___
CTCTGGAGTTGTTTCCGGAACGCGCTCC
6._NA 168___
TTCCGGGGTTGTTTACGG___CCCCCTCC
7._NA 168___
TTCCGGGGTTGTTTACGG___CCCCCTCC
8._NA 168___
CTCTGGAGTTGTTTCCGGAACGCGCTCC
9._NA 168___
______GG_____________________CG___CT___
10._NA 168___
______GG_____________________CG___CT___
11._NA 168___
______GG_____________________CC___CT___
12._NA 168___
______GG_____________________CC___CT___
13._NA 168___
______GG_____________________CC___CT___
14._NA 168___
______GG_____________________CC___CT___
15._NA 168___
______GG_____________________CC___CT___
16._NA 168___
______GG_____________________CC___CT___
17._NA 168___
______GG_____________________CG___CT___
18._NA 168___
______GG_____________________GG___CC___
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1._NA 168___
GGCTGGCCATTTAGCCTTCGCCGGGGAA
2._NA 168___
GGCTGGCCATTTAGCCTTCGCCGGGGAA
3._NA 168___
___CTGGCCATTTAGCCTTCGCCGGGGAA
4._NA 168___
GGCTGGCCATTTAGCCTTCGCCGGGGAA
5._NA 168___
GGCTGGCCAACTAACTTTCCCCGGGGAA
6._NA 168___
GGCTGGCCATTTAGCCTTCGCCGGGGAA
7._NA 168___
GGCTGGCCATTTAGCCTTCGCCGGGGAA
8._NA 168___
GGCTGGCCAACTAACTTTCCCCGGGGAA
9._NA 168___
___CTGG___AACTAA_________CCGG___AA
10._NA 168___
___CTGG___AACTAA_________CCGG___AA
11._NA 168___
___CTGG___ATTTAG_________CCGG___AA
12._NA 168___
___CTGG___ATTTAG_________CCGG___AA
13._NA 168___
___CTGG___ATTTAG_________CCGG___AA
14._NA 168___
___CTGG___ATTTAG_________CCGG___AA
15._NA 168___
___CTGG___ATTTAG_________CCGG___AA
16._NA 168___
___CTGG___ATTTAG_________CCGG___AA
17._NA 168___
___CTGG___AACTAA_________CCGG___AA
18._NA 168___
___CCGG___AATTAG_________CCGG___AA
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1._NA 168___
CCGGTTCCTTTTCCGGCCTTTTTTAAGG
2._NA 168___
CCGGTTCCTTTTCCGGCCTTTTTTAAGG
3._NA 168___
CCGGTTCCTTTTCCGGCCTTTTTTAAGG
4._NA 168___
CCGGTTCCTTTTCCGGCCTTTTTTAAGG
5._NA 168___
CCGGTTCCTTTTCTGTCCGTTTTTAAGG
6._NA 168___
CCGGTTCCTTTTCCGGCCTTTTTTAAGG
7._NA 168___
CCGGTTCCTTTTCCGGCCTTTTTTAAGG
8._NA 168___
CCGGTTCCTTTTCTGTCCGTTTTTAAGG
9._NA 168___
_________CC______CT______GTTT___AA___
10._NA 168___
_________CC______CT______GTTT___AA___
11._NA 168___
_________CC______CC______TTTT___AA___
12._NA 168___
_________CC______CC______TTTT___AA___
13._NA 168___
_________CC______CC______TTTT___AA___
14._NA 168___
_________CC______CC______TTTT___AA___
15._NA 168___
_________CC______CC______TTTT___AA___
16._NA 168___
_________CC______CC______TTTT___AA___
17._NA 168___
_________CC______CT______GTTT___AA___
18._NA 168___
__________________CC_________TT___AA___
 85 86 87 88 89 90 91 92 93 94 95    
1._NA 168___
TTCCTTCGAACCCCAAACAAACX_XX_XX_X
2._NA 168___
TTCCTTCGAACCCCAAACAAACX_XX_XX_X
3._NA 168___
TTCCTTCGAACCCCAAACAAACX_XX_XX_X
4._NA 168___
TTCCTTCGAACCCCAAACAAACX_XX_XX_X
5._NA 168___
CTCCTTCCAGCCACAGCCAGACX_XX_XX_X
6._NA 168___
TTCCTTCGAACCCCAAACAAACX_XX_XX_X
7._NA 168___
TTCCTTCGAACCCCAAACAAACX_XX_XX_X
8._NA 168___
CTCCTTCCAGCCACAGCCAGACX_XX_XX_X
9._NA 168___
CT___TTCCAGCC_______________X_XX_XX_X
10._NA 168___
CT___TTCCAGCC_______________X_XX_XX_X
11._NA 168___
TT___TTCGAACC_______________X_XX_XX_X
12._NA 168___
TT___TTCGAACC_______________X_XX_XX_X
13._NA 168___
TT___TTCGAACC_______________X_XX_XX_X
14._NA 168___
TT___TTCGAACC_______________X_XX_XX_X
15._NA 168___
TT___TTCGAACC_______________X_XX_XX_X
16._NA 168___
TT___TTCGAACC_______________X_XX_XX_X
17._NA 168___
CT___TTCCAGCC_______________X_XX_XX_X
18._NA 168___
______TTCCAG__________________X_XX_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._NA_168 GC-01-112-6-09

Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._NA_168 GC-01-112-6-09

Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

3._NA_168 GC-01-112-6-09

Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

4._NA_168 GC-01-112-6-09

Location: Tree: 6
Notes: 6 > FP4
 Mars, 2018

5._NA_168 GC-01-112-6-09

Location: Tree: 7
Notes: 7
 Mars, 2018

6._NA_168 GC-01-112-6-09

Location: Tree: 10
Notes: 10
 Mars, 2018

7._NA_168 GC-01-112-6-09

Location: Tree: 12
Notes: 12
 Mars, 2018

8._NA_168 GC-01-112-6-09

Location: Tree: 7
Notes: 7
 Mars, 2018

9._NA_168

Location: 1609 7
 Dapeng Zhang, 2016

10._NA_168

Location: 1609 7
 Dapeng Zhang, 2016

11._NA_168

Location: 1609 10
 Dapeng Zhang, 2016

12._NA_168

Location: 1609 12
 Dapeng Zhang, 2016

13._NA_168

Location: 1609 1 > FP
 Dapeng Zhang, 2016

14._NA_168

Location: 1609 3 > FP
 Dapeng Zhang, 2016

15._NA_168

Location: 1609 4 > FP
 Dapeng Zhang, 2016

16._NA_168

Location: 1609 6 > FP
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

17._NA_168

Location: MARPER D 435
 Dapeng Zhang, 2016

18._NA_168

Location: 5B F493 T5
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP521 30TcSNP529
31TcSNP534 32TcSNP547 33TcSNP560 34TcSNP561 35TcSNP577
36TcSNP591 37TcSNP602 38TcSNP606 39TcSNP619 40TcSNP645
41TcSNP653 42TcSNP689 43TcSNP701 44TcSNP702 45TcSNP723
46TcSNP731 47TcSNP751 48TcSNP776 49TcSNP799 50TcSNP823
51TcSNP836 52TcSNP860 53TcSNP872 54TcSNP878 55TcSNP891
56TcSNP894 57TcSNP899 58TcSNP917 59TcSNP929 60TcSNP944
61TcSNP953 62TcSNP994 63TcSNP998 64TcSNP999 65TcSNP1034
66TcSNP1041 67TcSNP1060 68TcSNP1062 69TcSNP1063 70TcSNP1075
71TcSNP1096 72TcSNP1111 73TcSNP1126 74TcSNP1144 75TcSNP1149
76TcSNP1156 77TcSNP1165 78TcSNP1175 79TcSNP1242 80TcSNP1253
81TcSNP1270 82TcSNP1309 83TcSNP1350 84TcSNP1383 85TcSNP1414
86TcSNP1439 87TcSNP1442 88TcSNP1458 89TcSNP1484 90TcSNP1520
91Tcm001s00947643 92Tcm002s20575712 93Tcm003s01336581 94Tcm003s07402719 95Tcm006s26664133